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The map label for this gene is potC [H]

Identifier: 158424085

GI number: 158424085

Start: 2795969

End: 2796775

Strand: Reverse

Name: potC [H]

Synonym: AZC_2461

Alternate gene names: 158424085

Gene position: 2796775-2795969 (Counterclockwise)

Preceding gene: 158424086

Following gene: 158424084

Centisome position: 52.08

GC content: 67.66

Gene sequence:

>807_bases
ATGGGCGCGCTTGCCATCCGCCGCATCTATGCCGGCCTCTCCGCCACCGTGCTCGCCTTCGTGCTCCTGCCGCTGGTCGC
CATCGTCTGGGTGAGCTTCTTCGAGAACCGCATCCTCTCCTTCCCGCCCACCGGCTACACCTTGTCCTGGTACGCGCGGG
CCTGGGAGCAGGAGGCCTTCCGCAACGGCTTCCTCACCAGCGTGGAGACGGCGATGTGCGCGGTCGTCATCTCGCTCGGG
CTCGGCATTCCGGCGAGCCTTGCGCTGGTGCGCTATCGCTTTCTGGGCCGCGATGCCATCCAGACGCTGCTGCTGGCACC
CATGGTGGTGCCCGGCATCGTCGGCGGCGCGGCGCTGTTCATCGCCTTCATCGAGCTGGAGGTGCTGATCGACCGGGACG
TGACCGGCACCTTCGGTGGCCTGCTGGTCGCCCATGGCCTCATCGCGCTGCCCTGGACGGTGCGACTTGTCACGGCGGGT
CTCGCGGGCGCCAACCGCTCCTGCGAGGAAGCGGCTTCCTCCCTCGGGGCTGCGCCCTTCACGGTGTTCCGGCGGGTGAC
GCTGCCGATGATCCGCCCCGCCATCGTCGCGGCGGCGCTGTTCTCCTTCGTCATCTCCTTCATCGATCTGGAGAAGTCGA
TCTTCCTCGTGGGGCCGGGCCGCACCACGCTCCAGATCGCGCTCGTCTCCTATCTGGAGTGGAACCTCGATTCCACCGTC
GCCGCCGTCGCCACCGTCCAGATCCTCATCATCGGCACGCTGCTCATCGTCAGCGACCGCTACGCGAAACTTGCCCGCGC
CTTCTGA

Upstream 100 bases:

>100_bases
TCGGCGCCGCGCTCGCCTTCGTGCTGATGGCCGTCACCCTGTGCCTCACCACCACCGCAAATGTGCTGGTGCAGCGGCAT
TACCGGAAGTGGAGCGAGTG

Downstream 100 bases:

>100_bases
GCGCCGGGCTGCGAACACGGGTGCTTCCATGTCCGAGGTCGTTCTCCAGTCCATCGTCAAGCGCTACGAGCACATGGTCG
CAGTCGACCATGTCTCCCTC

Product: spermidine/putrescine ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MGALAIRRIYAGLSATVLAFVLLPLVAIVWVSFFENRILSFPPTGYTLSWYARAWEQEAFRNGFLTSVETAMCAVVISLG
LGIPASLALVRYRFLGRDAIQTLLLAPMVVPGIVGGAALFIAFIELEVLIDRDVTGTFGGLLVAHGLIALPWTVRLVTAG
LAGANRSCEEAASSLGAAPFTVFRRVTLPMIRPAIVAAALFSFVISFIDLEKSIFLVGPGRTTLQIALVSYLEWNLDSTV
AAVATVQILIIGTLLIVSDRYAKLARAF

Sequences:

>Translated_268_residues
MGALAIRRIYAGLSATVLAFVLLPLVAIVWVSFFENRILSFPPTGYTLSWYARAWEQEAFRNGFLTSVETAMCAVVISLG
LGIPASLALVRYRFLGRDAIQTLLLAPMVVPGIVGGAALFIAFIELEVLIDRDVTGTFGGLLVAHGLIALPWTVRLVTAG
LAGANRSCEEAASSLGAAPFTVFRRVTLPMIRPAIVAAALFSFVISFIDLEKSIFLVGPGRTTLQIALVSYLEWNLDSTV
AAVATVQILIIGTLLIVSDRYAKLARAF
>Mature_267_residues
GALAIRRIYAGLSATVLAFVLLPLVAIVWVSFFENRILSFPPTGYTLSWYARAWEQEAFRNGFLTSVETAMCAVVISLGL
GIPASLALVRYRFLGRDAIQTLLLAPMVVPGIVGGAALFIAFIELEVLIDRDVTGTFGGLLVAHGLIALPWTVRLVTAGL
AGANRSCEEAASSLGAAPFTVFRRVTLPMIRPAIVAAALFSFVISFIDLEKSIFLVGPGRTTLQIALVSYLEWNLDSTVA
AVATVQILIIGTLLIVSDRYAKLARAF

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=221, Percent_Identity=28.9592760180996, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787081, Length=239, Percent_Identity=31.3807531380753, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787714, Length=239, Percent_Identity=31.7991631799163, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788764, Length=180, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28762; Mature: 28631

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALAIRRIYAGLSATVLAFVLLPLVAIVWVSFFENRILSFPPTGYTLSWYARAWEQEAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RNGFLTSVETAMCAVVISLGLGIPASLALVRYRFLGRDAIQTLLLAPMVVPGIVGGAALF
HCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFIELEVLIDRDVTGTFGGLLVAHGLIALPWTVRLVTAGLAGANRSCEEAASSLGAAPF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH
TVFRRVTLPMIRPAIVAAALFSFVISFIDLEKSIFLVGPGRTTLQIALVSYLEWNLDSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHH
AAVATVQILIIGTLLIVSDRYAKLARAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GALAIRRIYAGLSATVLAFVLLPLVAIVWVSFFENRILSFPPTGYTLSWYARAWEQEAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RNGFLTSVETAMCAVVISLGLGIPASLALVRYRFLGRDAIQTLLLAPMVVPGIVGGAALF
HCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFIELEVLIDRDVTGTFGGLLVAHGLIALPWTVRLVTAGLAGANRSCEEAASSLGAAPF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHH
TVFRRVTLPMIRPAIVAAALFSFVISFIDLEKSIFLVGPGRTTLQIALVSYLEWNLDSTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCHHH
AAVATVQILIIGTLLIVSDRYAKLARAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]