| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424083
Identifier: 158424083
GI number: 158424083
Start: 2793861
End: 2794835
Strand: Reverse
Name: 158424083
Synonym: AZC_2459
Alternate gene names: NA
Gene position: 2794835-2793861 (Counterclockwise)
Preceding gene: 158424084
Following gene: 158424082
Centisome position: 52.05
GC content: 62.87
Gene sequence:
>975_bases GTGTCGACGCTTCACGACAGCCTGATCGTCATTGACGGCCTGATCATTTCCGATTTCAGCCGCCCGGTTTTCGAGGACAT GCGCAAGGGCGGCCTGACGGCCGCCAACTGCACCTGCTCGGTGTGGGAGAACTTCACCGAGACCATGCGCAACATCGCCA AGTGGAAGGCGGATTTCCGCACACACGCGGATCTCATCACGCAGGTCTACACCACCGGGGACATCCTCCGCGCCAAGGCG GAGAACAAGACGGGCATCATCCTCGGCTGGCAGAACACCAGTGCCATCGACGACCGCATCGAATATCTGCCGCTGTTCCA CGAACTCGGCATCCGCATCATCCAGATGACCTACAACACCCAGAACTGGGTGGGCTCGGGCTGCTACGAGAGCCGCGACA GCGGCCTCTCCGACTTCGGCCATGACGTGGTGGCGGAGATGAACCGCCTCGGCATCCTGTGCGATCTCTCGCATGTGGGA CCGAAGACCTCCGAGGATGTCATCAAGGCGTCCAAGCAGCGCGTGGCCTATTCCCACTGCCTGCCGTCCGGCCTCAAGGA GCACAAGCGCAACAAGAGCGACGAGCAGTTGCGCTTCATCGCCGAGAAGGGCGGCTTCGTCGGCGTGACCATGTTCCCGC CCTTCCTCAAGAAAGGCCCGGCCGCGACGGTCGCCGATTATGTCGAGGCGATGGAATACGTCATCAACCTCGTGGGCGAG GATATCGTCGGCGTCGGGACCGACTTCACGCAGGGCTATGGCCAGCCCTTCTTCGACTGGATCACCCACGACAAGGGTTT CGGCCGCAAGCTCACCGACTTCGGCGCGGTCATCAATCCCGAGGGCTTCCGCGAGATCGGCGACTTCCCGAACCTCACCG CCGCCATGGAGCAGCGCGGCTGGTCCACGGGTCGCATCGAGAAGGTGATGGGCGGCAACTGGCTGCAGCTCCTGAAGGAC GTGTGGGGCCGCTGA
Upstream 100 bases:
>100_bases CCGGTTCATGTCTCCTGGCAGCCGGAGGCGGCGGTTCTCGTGCCGCTCTGAGCTTCCGGTCTCCGCCCATTTTCCATTTT TCAAGCGAAGGAAGAGTATC
Downstream 100 bases:
>100_bases GGCCCCGCTCATCGCGCCGCAACAGAAGGAACCGTCCGTGGCCAAGCCTGAAATCGAACTCGACGTCGATCCGGAAACAG GGCGCTGGTACGCCGACCAG
Product: renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSTLHDSLIVIDGLIISDFSRPVFEDMRKGGLTAANCTCSVWENFTETMRNIAKWKADFRTHADLITQVYTTGDILRAKA ENKTGIILGWQNTSAIDDRIEYLPLFHELGIRIIQMTYNTQNWVGSGCYESRDSGLSDFGHDVVAEMNRLGILCDLSHVG PKTSEDVIKASKQRVAYSHCLPSGLKEHKRNKSDEQLRFIAEKGGFVGVTMFPPFLKKGPAATVADYVEAMEYVINLVGE DIVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRGWSTGRIEKVMGGNWLQLLKD VWGR
Sequences:
>Translated_324_residues MSTLHDSLIVIDGLIISDFSRPVFEDMRKGGLTAANCTCSVWENFTETMRNIAKWKADFRTHADLITQVYTTGDILRAKA ENKTGIILGWQNTSAIDDRIEYLPLFHELGIRIIQMTYNTQNWVGSGCYESRDSGLSDFGHDVVAEMNRLGILCDLSHVG PKTSEDVIKASKQRVAYSHCLPSGLKEHKRNKSDEQLRFIAEKGGFVGVTMFPPFLKKGPAATVADYVEAMEYVINLVGE DIVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRGWSTGRIEKVMGGNWLQLLKD VWGR >Mature_323_residues STLHDSLIVIDGLIISDFSRPVFEDMRKGGLTAANCTCSVWENFTETMRNIAKWKADFRTHADLITQVYTTGDILRAKAE NKTGIILGWQNTSAIDDRIEYLPLFHELGIRIIQMTYNTQNWVGSGCYESRDSGLSDFGHDVVAEMNRLGILCDLSHVGP KTSEDVIKASKQRVAYSHCLPSGLKEHKRNKSDEQLRFIAEKGGFVGVTMFPPFLKKGPAATVADYVEAMEYVINLVGED IVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRGWSTGRIEKVMGGNWLQLLKDV WGR
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=256, Percent_Identity=27.34375, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI189458885, Length=268, Percent_Identity=25, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI4758190, Length=268, Percent_Identity=25, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI193211608, Length=249, Percent_Identity=24.0963855421687, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI193211610, Length=249, Percent_Identity=24.0963855421687, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI281362638, Length=294, Percent_Identity=27.5510204081633, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI281362636, Length=294, Percent_Identity=27.5510204081633, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI221475880, Length=262, Percent_Identity=25.5725190839695, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI161083233, Length=262, Percent_Identity=26.7175572519084, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 36246; Mature: 36114
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHDSLIVIDGLIISDFSRPVFEDMRKGGLTAANCTCSVWENFTETMRNIAKWKADFR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH THADLITQVYTTGDILRAKAENKTGIILGWQNTSAIDDRIEYLPLFHELGIRIIQMTYNT HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEECC QNWVGSGCYESRDSGLSDFGHDVVAEMNRLGILCDLSHVGPKTSEDVIKASKQRVAYSHC CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHH LPSGLKEHKRNKSDEQLRFIAEKGGFVGVTMFPPFLKKGPAATVADYVEAMEYVINLVGE CHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCC DIVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRG HHHCCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHCCCCCHHHHHHHCC WSTGRIEKVMGGNWLQLLKDVWGR CCCCCHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure STLHDSLIVIDGLIISDFSRPVFEDMRKGGLTAANCTCSVWENFTETMRNIAKWKADFR CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH THADLITQVYTTGDILRAKAENKTGIILGWQNTSAIDDRIEYLPLFHELGIRIIQMTYNT HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEECC QNWVGSGCYESRDSGLSDFGHDVVAEMNRLGILCDLSHVGPKTSEDVIKASKQRVAYSHC CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHH LPSGLKEHKRNKSDEQLRFIAEKGGFVGVTMFPPFLKKGPAATVADYVEAMEYVINLVGE CHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCC DIVGVGTDFTQGYGQPFFDWITHDKGFGRKLTDFGAVINPEGFREIGDFPNLTAAMEQRG HHHCCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHCCCCCHHHHHHHCC WSTGRIEKVMGGNWLQLLKDVWGR CCCCCHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]