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The map label for this gene is 158424077

Identifier: 158424077

GI number: 158424077

Start: 2788381

End: 2789622

Strand: Direct

Name: 158424077

Synonym: AZC_2453

Alternate gene names: NA

Gene position: 2788381-2789622 (Clockwise)

Preceding gene: 158424076

Following gene: 158424089

Centisome position: 51.93

GC content: 71.01

Gene sequence:

>1242_bases
ATGGATGCGGCCTTTCGGGCCGCGTCCCCCGCCGCCATGGCCGCGCTCTTGCGCGGGCTGGGCACGCTCGACCGTGCGGA
AGACGCCTTTCAGGAGGCCTGCCTGCGCGCCCTCACCCACTGGCCGGAGCGCGGCTCGCCCCACGATCCGACGTCGTGGC
TGGTGAGGGTCGGCCGCAATGCCGGCATCGACCGGCTCCGCCGGCACGCCCGAGAGGCGCGGCTGCCGACCGAACATCTG
GTGCCCGCAACGCCGGACGAGGAAGACCGGCGCGCGGACGCCCTCGACCAGACCGGCCTCGGCGACGATGTGCTGCGCCT
CCTGTTCATCTGTTGCCATCCTGACTTGGCGCCGGCGCATCAGATCGCGCTGGCCCTGCGCGTGGTCTGCGGGCTCAGCG
TGCCGGAGATCGCCCGCGTCTTTCTCATGGGCGAAGCGGCGATGGAACAGCGGATCACCCGCGCCAAGCGCCGGGTGGCG
CAGGCCGGCCTTCCCTTCGAGACGCCCGCGCCCCGCGAGCGGCAGGCGCGCCTGTCCGCCGTCTCGGCCATGGTCTATCT
CATCTTCACCGAGGGCCATTCGGCATCCGCGCAGGAAAGCGGCCGCAAGGCGCCCCTCTGCATGGAAGCCATCAGGCTCG
GCCGTCTGCTGGCGACGCTCTTTCCCGAGGAGCCGGAGGTGCTCGGTCTTCTCGCCTTGATGCTGCTCCATGAGGCCCGC
GCGCCGGCCCGCTTCAGCGCCGAGGGCTCCATCATCCTGCTGGAGGATCAGGACCGCAGCCTCTGGAACCCTGTCGCCAT
CGCCGAGGGCACGGCGCTCACCAACCGCGCGTTCCGCATGCACCGGCCCGGCCCCTATCAGCTTCAGGCCGCCATCGCCG
CCCTGCATGCCCGCGCGCCGGACGTCGATCGCACGGACTGGGCGCAGATCGAGCAGCTCTATGGCGTGCTCGCGGACATG
GAGCCGACGCCGGTCGTCATCCTTAACCACGCGGTGGCGCTTTCGCGGGCGAAAGGTCCGGCCGAAGGTCTGGCGCGGAT
CGTACCGCTGGCGCAGGTGCTGGCCGGCTACTTTCCATATCACGCGGCTCGCGGCCATCTGCTGGAGCGTTCCGGCGCGC
GGGAAGAGGCTTACGCGGCCTATGCCCGAAGCCTAGATCTCGCGCCCAGCGCTGCGGAGGCCGCACAGGTCCGGCTCTAT
ATGGATCGGCTGGCCGCGCCGACGCCCGTCAGCCCGCAATGA

Upstream 100 bases:

>100_bases
CCATCGAAGGCCAGCACGGCAAATACATGTGACGGTGACAGACGACGAGGCCGCACAGGCGAAAGAGCCGCGCCCAAGCC
TGCGCCGGGATCGCGCCTCC

Downstream 100 bases:

>100_bases
CCCCGCGGGGATCGGCGTCGAAATAGTCGGGATTGACGTCGCGGATCAGGCCGAGGCTGCCGTGCAGCGTCTTCACGTGC
CGTCGCATGGCGGCCGAGGC

Product: sigma-70 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDAAFRAASPAAMAALLRGLGTLDRAEDAFQEACLRALTHWPERGSPHDPTSWLVRVGRNAGIDRLRRHAREARLPTEHL
VPATPDEEDRRADALDQTGLGDDVLRLLFICCHPDLAPAHQIALALRVVCGLSVPEIARVFLMGEAAMEQRITRAKRRVA
QAGLPFETPAPRERQARLSAVSAMVYLIFTEGHSASAQESGRKAPLCMEAIRLGRLLATLFPEEPEVLGLLALMLLHEAR
APARFSAEGSIILLEDQDRSLWNPVAIAEGTALTNRAFRMHRPGPYQLQAAIAALHARAPDVDRTDWAQIEQLYGVLADM
EPTPVVILNHAVALSRAKGPAEGLARIVPLAQVLAGYFPYHAARGHLLERSGAREEAYAAYARSLDLAPSAAEAAQVRLY
MDRLAAPTPVSPQ

Sequences:

>Translated_413_residues
MDAAFRAASPAAMAALLRGLGTLDRAEDAFQEACLRALTHWPERGSPHDPTSWLVRVGRNAGIDRLRRHAREARLPTEHL
VPATPDEEDRRADALDQTGLGDDVLRLLFICCHPDLAPAHQIALALRVVCGLSVPEIARVFLMGEAAMEQRITRAKRRVA
QAGLPFETPAPRERQARLSAVSAMVYLIFTEGHSASAQESGRKAPLCMEAIRLGRLLATLFPEEPEVLGLLALMLLHEAR
APARFSAEGSIILLEDQDRSLWNPVAIAEGTALTNRAFRMHRPGPYQLQAAIAALHARAPDVDRTDWAQIEQLYGVLADM
EPTPVVILNHAVALSRAKGPAEGLARIVPLAQVLAGYFPYHAARGHLLERSGAREEAYAAYARSLDLAPSAAEAAQVRLY
MDRLAAPTPVSPQ
>Mature_413_residues
MDAAFRAASPAAMAALLRGLGTLDRAEDAFQEACLRALTHWPERGSPHDPTSWLVRVGRNAGIDRLRRHAREARLPTEHL
VPATPDEEDRRADALDQTGLGDDVLRLLFICCHPDLAPAHQIALALRVVCGLSVPEIARVFLMGEAAMEQRITRAKRRVA
QAGLPFETPAPRERQARLSAVSAMVYLIFTEGHSASAQESGRKAPLCMEAIRLGRLLATLFPEEPEVLGLLALMLLHEAR
APARFSAEGSIILLEDQDRSLWNPVAIAEGTALTNRAFRMHRPGPYQLQAAIAALHARAPDVDRTDWAQIEQLYGVLADM
EPTPVVILNHAVALSRAKGPAEGLARIVPLAQVLAGYFPYHAARGHLLERSGAREEAYAAYARSLDLAPSAAEAAQVRLY
MDRLAAPTPVSPQ

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 44992; Mature: 44992

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAFRAASPAAMAALLRGLGTLDRAEDAFQEACLRALTHWPERGSPHDPTSWLVRVGRN
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
AGIDRLRRHAREARLPTEHLVPATPDEEDRRADALDQTGLGDDVLRLLFICCHPDLAPAH
CCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH
QIALALRVVCGLSVPEIARVFLMGEAAMEQRITRAKRRVAQAGLPFETPAPRERQARLSA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VSAMVYLIFTEGHSASAQESGRKAPLCMEAIRLGRLLATLFPEEPEVLGLLALMLLHEAR
HHHHHHEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
APARFSAEGSIILLEDQDRSLWNPVAIAEGTALTNRAFRMHRPGPYQLQAAIAALHARAP
CCCCCCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
DVDRTDWAQIEQLYGVLADMEPTPVVILNHAVALSRAKGPAEGLARIVPLAQVLAGYFPY
CCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HAARGHLLERSGAREEAYAAYARSLDLAPSAAEAAQVRLYMDRLAAPTPVSPQ
HHHHCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDAAFRAASPAAMAALLRGLGTLDRAEDAFQEACLRALTHWPERGSPHDPTSWLVRVGRN
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
AGIDRLRRHAREARLPTEHLVPATPDEEDRRADALDQTGLGDDVLRLLFICCHPDLAPAH
CCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH
QIALALRVVCGLSVPEIARVFLMGEAAMEQRITRAKRRVAQAGLPFETPAPRERQARLSA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VSAMVYLIFTEGHSASAQESGRKAPLCMEAIRLGRLLATLFPEEPEVLGLLALMLLHEAR
HHHHHHEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
APARFSAEGSIILLEDQDRSLWNPVAIAEGTALTNRAFRMHRPGPYQLQAAIAALHARAP
CCCCCCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
DVDRTDWAQIEQLYGVLADMEPTPVVILNHAVALSRAKGPAEGLARIVPLAQVLAGYFPY
CCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HAARGHLLERSGAREEAYAAYARSLDLAPSAAEAAQVRLYMDRLAAPTPVSPQ
HHHHCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]