| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424060
Identifier: 158424060
GI number: 158424060
Start: 2771428
End: 2772780
Strand: Direct
Name: 158424060
Synonym: AZC_2436
Alternate gene names: NA
Gene position: 2771428-2772780 (Clockwise)
Preceding gene: 158424057
Following gene: 158424061
Centisome position: 51.61
GC content: 68.0
Gene sequence:
>1353_bases ATGAGTTCGCTGCGTGCACCCGGAGCCGACCGCCCCCTGCGCATCGCCGTCATCGGCAGCGGCATCTCCGGCCTGTCAGC CGCCTGGCTGCTGTCTTCGCGCCACGAGGTGACACTCTATGAGGCGGACCGGCGCATCGGCGGGCACAGCAACACTGTGG ACACGCCGGCCGGCCCCGTGGACACCGGCTTCATCGTCTATAACGAGGCGGCCTATCCCAATCTCACGGCCCTTTTCGCC CATCTGAACGTGCCCACGAAATGGTCGGACATGTCGCTGGGCGTCTCCCTCGATCGGGGACGGCTTGAATATTCCGGCGA CAGCCTGCGCAAGCTGTTCGCCCAACCCGCCAATCTGGTGAGCGGGCGCTTCTGGACCATGCTGCGTGACCTACTGCGCT TCTATCGCGAGGCCCCGGCCGCGGTGGCCGCGCTGGAGGATACGCCCCTTGACGTCTATCTCGCCGCCGAGGGCTACAGC GCCGCCTTCCGGGACGACCATCTCTATCCCATGGCCGCCGCCATCTGGTCGACGCCGGCGGCGGAGATCGGCGCCTATCC GGCGGCCGCCTTCATCCGTTTCTGCATCAATCACGGTCTGCTTCAGGTGCTCAACCGGCCGCTCTGGCGGACGGTGGACG GCGGCAGCCGGGAGTATGTCCGCCGCCTGCTCGCCCCCTTGGGCGACCGGGTGCGGGTGGGGTGCGCCGTGCGCAGCGTG CGCCGCGTTTCCGGTCTGGTGGACGTGACGGACCAGTCGGGCAACCGCGCCTTCTTCGATCACGTGGTCATCGCCACCCA TGCGGACCAGGCGCTGCGCCTGCTCACCGACCCGACGCTGACCGAGCGCCAGTTGCTCGGAGCCTTCCGCTATTCCACCA ACGAGGCCATCCTGCACCGGGACACGTCTCTGATGCCAAAGCGCAAGGCCGTGTGGTCTGCCTGGAACTACATGTCGGAG CGGGATGGGGACGGCGCGCGCCTCTCCGTGACCTACTGGATGAATCGTCTTCAGGGCCTGCCCATGGACCAGCCCCTCTT CGTGACCCTCAACCCGCCACGCGAGCCGCGCGCCGGCACCGTGCTGCGCCGCGAGACCTATACCCATCCCACCTTCAACA CCGAGGCGATGGCGACCCAGAAGCAGCTCTGGACCATTCAGGGCCAGCACAACACCTGGTATTGCGGCGCCCATTTCGGG GCCGGCTTCCATGAGGACGGCTTGCAGGCGGGCCTCGCCGTGGCCGAGGCGCTCGGCGGCGTGCGGCGGCCGTGGACCGT GGCGAACGAATCCGGCCGCATCTTCCTCCAGCCACGTGAAGCGGCCATGCCGGCACTGGAGGCAGCCGAATGA
Upstream 100 bases:
>100_bases CGCGGGCAAGTGATCCGGCTTTGGAACGCTGACGTAGGAACAGACAAGCTGACGGCTTCTCCGGCGGCGCAGGCCCGCTC TCCAAAACAAGGTCATATCA
Downstream 100 bases:
>100_bases TGCCCCCGGCCTCGGCCCTCTATTCCGGCACGGTGGTGCACCACCGGGTGCGGCCCCGCGCCCATCGCCTCAGCTACAAG ATGTTCTCGCTGCTGCTGGA
Product: amine oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSSLRAPGADRPLRIAVIGSGISGLSAAWLLSSRHEVTLYEADRRIGGHSNTVDTPAGPVDTGFIVYNEAAYPNLTALFA HLNVPTKWSDMSLGVSLDRGRLEYSGDSLRKLFAQPANLVSGRFWTMLRDLLRFYREAPAAVAALEDTPLDVYLAAEGYS AAFRDDHLYPMAAAIWSTPAAEIGAYPAAAFIRFCINHGLLQVLNRPLWRTVDGGSREYVRRLLAPLGDRVRVGCAVRSV RRVSGLVDVTDQSGNRAFFDHVVIATHADQALRLLTDPTLTERQLLGAFRYSTNEAILHRDTSLMPKRKAVWSAWNYMSE RDGDGARLSVTYWMNRLQGLPMDQPLFVTLNPPREPRAGTVLRRETYTHPTFNTEAMATQKQLWTIQGQHNTWYCGAHFG AGFHEDGLQAGLAVAEALGGVRRPWTVANESGRIFLQPREAAMPALEAAE
Sequences:
>Translated_450_residues MSSLRAPGADRPLRIAVIGSGISGLSAAWLLSSRHEVTLYEADRRIGGHSNTVDTPAGPVDTGFIVYNEAAYPNLTALFA HLNVPTKWSDMSLGVSLDRGRLEYSGDSLRKLFAQPANLVSGRFWTMLRDLLRFYREAPAAVAALEDTPLDVYLAAEGYS AAFRDDHLYPMAAAIWSTPAAEIGAYPAAAFIRFCINHGLLQVLNRPLWRTVDGGSREYVRRLLAPLGDRVRVGCAVRSV RRVSGLVDVTDQSGNRAFFDHVVIATHADQALRLLTDPTLTERQLLGAFRYSTNEAILHRDTSLMPKRKAVWSAWNYMSE RDGDGARLSVTYWMNRLQGLPMDQPLFVTLNPPREPRAGTVLRRETYTHPTFNTEAMATQKQLWTIQGQHNTWYCGAHFG AGFHEDGLQAGLAVAEALGGVRRPWTVANESGRIFLQPREAAMPALEAAE >Mature_449_residues SSLRAPGADRPLRIAVIGSGISGLSAAWLLSSRHEVTLYEADRRIGGHSNTVDTPAGPVDTGFIVYNEAAYPNLTALFAH LNVPTKWSDMSLGVSLDRGRLEYSGDSLRKLFAQPANLVSGRFWTMLRDLLRFYREAPAAVAALEDTPLDVYLAAEGYSA AFRDDHLYPMAAAIWSTPAAEIGAYPAAAFIRFCINHGLLQVLNRPLWRTVDGGSREYVRRLLAPLGDRVRVGCAVRSVR RVSGLVDVTDQSGNRAFFDHVVIATHADQALRLLTDPTLTERQLLGAFRYSTNEAILHRDTSLMPKRKAVWSAWNYMSER DGDGARLSVTYWMNRLQGLPMDQPLFVTLNPPREPRAGTVLRRETYTHPTFNTEAMATQKQLWTIQGQHNTWYCGAHFGA GFHEDGLQAGLAVAEALGGVRRPWTVANESGRIFLQPREAAMPALEAAE
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49763; Mature: 49632
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLRAPGADRPLRIAVIGSGISGLSAAWLLSSRHEVTLYEADRRIGGHSNTVDTPAGPV CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC DTGFIVYNEAAYPNLTALFAHLNVPTKWSDMSLGVSLDRGRLEYSGDSLRKLFAQPANLV CCCEEEECCCCCCCHHHHEEECCCCCCCCCCEECEEECCCEEEECCHHHHHHHHCCHHHH SGRFWTMLRDLLRFYREAPAAVAALEDTPLDVYLAAEGYSAAFRDDHLYPMAAAIWSTPA CHHHHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCH AEIGAYPAAAFIRFCINHGLLQVLNRPLWRTVDGGSREYVRRLLAPLGDRVRVGCAVRSV HHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHH RRVSGLVDVTDQSGNRAFFDHVVIATHADQALRLLTDPTLTERQLLGAFRYSTNEAILHR HHHCCEEEECCCCCCEEEEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEC DTSLMPKRKAVWSAWNYMSERDGDGARLSVTYWMNRLQGLPMDQPLFVTLNPPREPRAGT CCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC VLRRETYTHPTFNTEAMATQKQLWTIQGQHNTWYCGAHFGAGFHEDGLQAGLAVAEALGG EEEECCCCCCCCCCHHHHHHHEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC VRRPWTVANESGRIFLQPREAAMPALEAAE CCCCCEEECCCCEEEECCHHHHCCCHHCCC >Mature Secondary Structure SSLRAPGADRPLRIAVIGSGISGLSAAWLLSSRHEVTLYEADRRIGGHSNTVDTPAGPV CCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC DTGFIVYNEAAYPNLTALFAHLNVPTKWSDMSLGVSLDRGRLEYSGDSLRKLFAQPANLV CCCEEEECCCCCCCHHHHEEECCCCCCCCCCEECEEECCCEEEECCHHHHHHHHCCHHHH SGRFWTMLRDLLRFYREAPAAVAALEDTPLDVYLAAEGYSAAFRDDHLYPMAAAIWSTPA CHHHHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCH AEIGAYPAAAFIRFCINHGLLQVLNRPLWRTVDGGSREYVRRLLAPLGDRVRVGCAVRSV HHHCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHH RRVSGLVDVTDQSGNRAFFDHVVIATHADQALRLLTDPTLTERQLLGAFRYSTNEAILHR HHHCCEEEECCCCCCEEEEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEC DTSLMPKRKAVWSAWNYMSERDGDGARLSVTYWMNRLQGLPMDQPLFVTLNPPREPRAGT CCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC VLRRETYTHPTFNTEAMATQKQLWTIQGQHNTWYCGAHFGAGFHEDGLQAGLAVAEALGG EEEECCCCCCCCCCHHHHHHHEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC VRRPWTVANESGRIFLQPREAAMPALEAAE CCCCCEEECCCCEEEECCHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA