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The map label for this gene is dedA [C]

Identifier: 158423991

GI number: 158423991

Start: 2695164

End: 2695688

Strand: Direct

Name: dedA [C]

Synonym: AZC_2367

Alternate gene names: 158423991

Gene position: 2695164-2695688 (Clockwise)

Preceding gene: 158423988

Following gene: 158423992

Centisome position: 50.19

GC content: 64.38

Gene sequence:

>525_bases
ATGATCGACTTCAGCTCTTTCGTTGCCGATACACTGGCCCTGGTTGAACAGCACAAGCAATGGGCAGTGCCTATCGTCTT
TGCACTCGCTTTCGGGGAATCCCTGGCTGTTCTTTCGATCTTCATTCCCGCGACGGTGCTTCTGCTGGGCATCGGCGCGC
TGATCGAGGCATCCAATCTCGCCTTCTGGCCCATCTGGGTCGCCGCCGCCGCGGGCGCAATGCTGGGCGACAGCGTGTCC
TATGCACTCGGCTACTATTTCAAGGACGGGGCGAAGACCGTGTGGCCGCTCTCCCGCCGGCCGGAGATGGTCGCGCAGGG
CGAAGCCTTCTTCGCCCGGTTCGGGGTCTGGAGCATCGCGGTGGGCCGCTTCTTCGGCCCGGCCCGTGCCGTGGTGCCGC
TCATCGCCGGCATCCTGGCCATGCGGCAGATCCCTTTCCAAGTGGCCAATGTGGCGAGTGCCCTCCTCTGGGCTTTCGTG
ATGCTCGCACCGGGCGGGGCCGCGCTCAAGCTCATCGGCTACTGA

Upstream 100 bases:

>100_bases
AATGGCGCTTTCCCCCGCCGGCGGACGCAAATTCCCGTCAGACCGGAGCCTTGCCTTGCAATCGCCGACAATGCCCTCGA
TCTAGTTCCGCGGAGGACCG

Downstream 100 bases:

>100_bases
CCGGAACAGGGCAGGCGGCGGCCGGGTTTGCCTTCCGACAACAGGAAGGAACGGCAATGACCTGGCATATCCCCCTCGCC
GTCTCGCTGGCCCTCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MIDFSSFVADTLALVEQHKQWAVPIVFALAFGESLAVLSIFIPATVLLLGIGALIEASNLAFWPIWVAAAAGAMLGDSVS
YALGYYFKDGAKTVWPLSRRPEMVAQGEAFFARFGVWSIAVGRFFGPARAVVPLIAGILAMRQIPFQVANVASALLWAFV
MLAPGGAALKLIGY

Sequences:

>Translated_174_residues
MIDFSSFVADTLALVEQHKQWAVPIVFALAFGESLAVLSIFIPATVLLLGIGALIEASNLAFWPIWVAAAAGAMLGDSVS
YALGYYFKDGAKTVWPLSRRPEMVAQGEAFFARFGVWSIAVGRFFGPARAVVPLIAGILAMRQIPFQVANVASALLWAFV
MLAPGGAALKLIGY
>Mature_174_residues
MIDFSSFVADTLALVEQHKQWAVPIVFALAFGESLAVLSIFIPATVLLLGIGALIEASNLAFWPIWVAAAAGAMLGDSVS
YALGYYFKDGAKTVWPLSRRPEMVAQGEAFFARFGVWSIAVGRFFGPARAVVPLIAGILAMRQIPFQVANVASALLWAFV
MLAPGGAALKLIGY

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=160, Percent_Identity=34.375, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788656, Length=170, Percent_Identity=30, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 18551; Mature: 18551

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFSSFVADTLALVEQHKQWAVPIVFALAFGESLAVLSIFIPATVLLLGIGALIEASNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFWPIWVAAAAGAMLGDSVSYALGYYFKDGAKTVWPLSRRPEMVAQGEAFFARFGVWSIA
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCHHHHCCHHHHHHHHHHHHH
VGRFFGPARAVVPLIAGILAMRQIPFQVANVASALLWAFVMLAPGGAALKLIGY
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MIDFSSFVADTLALVEQHKQWAVPIVFALAFGESLAVLSIFIPATVLLLGIGALIEASNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFWPIWVAAAAGAMLGDSVSYALGYYFKDGAKTVWPLSRRPEMVAQGEAFFARFGVWSIA
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCHHHHCCHHHHHHHHHHHHH
VGRFFGPARAVVPLIAGILAMRQIPFQVANVASALLWAFVMLAPGGAALKLIGY
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]