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The map label for this gene is erfK [H]

Identifier: 158423984

GI number: 158423984

Start: 2688642

End: 2689328

Strand: Direct

Name: erfK [H]

Synonym: AZC_2360

Alternate gene names: 158423984

Gene position: 2688642-2689328 (Clockwise)

Preceding gene: 158423983

Following gene: 158423988

Centisome position: 50.07

GC content: 65.21

Gene sequence:

>687_bases
TTGCGCCGTCCGACAATTCGGTTGCATCACCTGCGCGTTTGCGGCGAGATTTCGGCAGTCTCGTGTCCGGCTCTTTCGCG
TGCGTGGAGTGACCGACTGATGATGCGTCGAAGCCTTGCCGCCGCAGCCGTGCTGGCTGTCTCCCTCGGGTCGGCGGTCG
CCGCCCCTTACCAGTCCCCCCAGCCCACCGATTTCTTCGGCTTCGCCGCTCTGTTCAGCGGCGCGGGCAATGTGGCGGGC
ACCTCGCCCTTTCCCCGGCATCTGGTAGCCTTCGATGCCAAATACCAGCCGGGCAGCATCGTGGTGAACACCGCCCAGCG
GCGCCTCTATTTCGTCACCGCCCCCGGTCAGGCCATGGAATATGGCGTGGGCGTCGGTCGCGACGGCTTTCAGTGGTCGG
GCGTGAAGACGGTGAGCGCGAAGAAGGAATGGCCCTCCTGGACGCCGCCGGAGCAGATGCTGAAGCGTCGCCCCGACCTG
CCACGCTATATGCCCGGCGGCATCGAAAATCCGCTGGGCGCGCGGGCCATGTATCTGGGGTCGAGCCTCTACCGCATCCA
CGGCTCGAACGAGCCGGAGACCATCGGGCAGGCCGTGTCGTCCGGCTGCATCCGCATGACCAATGATGACGTCATCGACC
TCTATAATCGCGTGAAGGTCGGCGCGACGGTCTATGTGATGCGCTGA

Upstream 100 bases:

>100_bases
ATCGCCCACCATCCGGCCTCAAAGCTCAGACACTTCGATCGTTTGTGCCTTCGGCCTCAAGCTGAGCCGCAATGCACGCT
TAACCCTGCCGCGCATTCCC

Downstream 100 bases:

>100_bases
GGGGCTTTCAGGCGCCGCGCGTCCGCCACGCCTGCCGTAGTTGGTCGGGCTTGTCCCTGCCAACTACGGGCGCCGCTTCG
AACGGTAGCGGTCTGGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRRPTIRLHHLRVCGEISAVSCPALSRAWSDRLMMRRSLAAAAVLAVSLGSAVAAPYQSPQPTDFFGFAALFSGAGNVAG
TSPFPRHLVAFDAKYQPGSIVVNTAQRRLYFVTAPGQAMEYGVGVGRDGFQWSGVKTVSAKKEWPSWTPPEQMLKRRPDL
PRYMPGGIENPLGARAMYLGSSLYRIHGSNEPETIGQAVSSGCIRMTNDDVIDLYNRVKVGATVYVMR

Sequences:

>Translated_228_residues
MRRPTIRLHHLRVCGEISAVSCPALSRAWSDRLMMRRSLAAAAVLAVSLGSAVAAPYQSPQPTDFFGFAALFSGAGNVAG
TSPFPRHLVAFDAKYQPGSIVVNTAQRRLYFVTAPGQAMEYGVGVGRDGFQWSGVKTVSAKKEWPSWTPPEQMLKRRPDL
PRYMPGGIENPLGARAMYLGSSLYRIHGSNEPETIGQAVSSGCIRMTNDDVIDLYNRVKVGATVYVMR
>Mature_228_residues
MRRPTIRLHHLRVCGEISAVSCPALSRAWSDRLMMRRSLAAAAVLAVSLGSAVAAPYQSPQPTDFFGFAALFSGAGNVAG
TSPFPRHLVAFDAKYQPGSIVVNTAQRRLYFVTAPGQAMEYGVGVGRDGFQWSGVKTVSAKKEWPSWTPPEQMLKRRPDL
PRYMPGGIENPLGARAMYLGSSLYRIHGSNEPETIGQAVSSGCIRMTNDDVIDLYNRVKVGATVYVMR

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=197, Percent_Identity=34.010152284264, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787968, Length=153, Percent_Identity=37.9084967320261, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787356, Length=140, Percent_Identity=36.4285714285714, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787040, Length=201, Percent_Identity=31.3432835820896, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 24865; Mature: 24865

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPTIRLHHLRVCGEISAVSCPALSRAWSDRLMMRRSLAAAAVLAVSLGSAVAAPYQSP
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QPTDFFGFAALFSGAGNVAGTSPFPRHLVAFDAKYQPGSIVVNTAQRRLYFVTAPGQAME
CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCEEEEEEECCCCHHH
YGVGVGRDGFQWSGVKTVSAKKEWPSWTPPEQMLKRRPDLPRYMPGGIENPLGARAMYLG
HCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHC
SSLYRIHGSNEPETIGQAVSSGCIRMTNDDVIDLYNRVKVGATVYVMR
CEEEEEECCCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MRRPTIRLHHLRVCGEISAVSCPALSRAWSDRLMMRRSLAAAAVLAVSLGSAVAAPYQSP
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QPTDFFGFAALFSGAGNVAGTSPFPRHLVAFDAKYQPGSIVVNTAQRRLYFVTAPGQAME
CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCEEEEEEECCCCHHH
YGVGVGRDGFQWSGVKTVSAKKEWPSWTPPEQMLKRRPDLPRYMPGGIENPLGARAMYLG
HCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHC
SSLYRIHGSNEPETIGQAVSSGCIRMTNDDVIDLYNRVKVGATVYVMR
CEEEEEECCCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]