| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423946
Identifier: 158423946
GI number: 158423946
Start: 2646485
End: 2647249
Strand: Direct
Name: 158423946
Synonym: AZC_2322
Alternate gene names: NA
Gene position: 2646485-2647249 (Clockwise)
Preceding gene: 158423945
Following gene: 158423947
Centisome position: 49.28
GC content: 63.92
Gene sequence:
>765_bases ATGACCTATTGTTGCGGCGTTCTGGTTCGGGACGGGCTGGTGATGATCGCGGACACGCGCACCAATGCCGGGCTCGACAA CATCTCCACCTTCCGCAAGCTGCACATTTTCGAGGAGCCGGGCCATTACGTGATGGCGCTCGCCTCCGCCGGAAATCTCT CGGTGTCCCAGTCCGTGGTCAGCCTGCTGCACGAGGGCGTAGAGGACCATGAGGCCGGGGAACGGCAGATGATCGGCGAC TGCCGCACCATGTTCCAGGCCGCGCAACTCGTGGGCCGCGCCATCCGGCAGGTGCATGCGGTGGATGCGCAGGCGCTGGA GCACAGCAATGTCAGCTTCGATGTGTCCTTCCTGCTGGGCGGCCAGATCGCCGGCGGGCCGCTACGGCTGTTCATGGTCT ATTCGGCGGGCAATTTCATCGAATGCACCACCGACACGCCCTTCCTTCAGATCGGCGAGCACAAATACGGCAAGCCGGTT CTGGACCGCGCCGTGACCTATGACATGGAGATTTCCGACGCGCTCAAGGCGAGCCTCATCTCCATGGACAGCACCATGCG CTCGAACCTCGGCGTCGGCCTGCCCATCGACGTGCTGGTGCTCTGCCCGAACACGCTGGAAGCGGAACTGAACTACCGCA TCGAGCCGGGCGAGCCCTATTTCCACGACCTGCGCGAACGTTGGTCCGCCGCTTTGCGCGCCGCCCATTCCGGCATTCCG CGCCCGCCCTACCTGAAGAACGGTCGCCGCGTCATCGAGAGTTGA
Upstream 100 bases:
>100_bases AATAGGCTCGACCTGCGCCGCGACTTATGTTTGGGAGAAGCTGCGTGCGGCACGTCCGCGCGGAAGAAAGGGCGAGCCCC GAAGGGCCCTGGGAGAAACC
Downstream 100 bases:
>100_bases TGGCATTCCGGCTCAGGTAGGGCCTATCTAGGCGCCCCACGCCGGAGGGTCTGCCATGGTCCATATCCACATCACCGGGG CGTCCGGTTCGGGCACCTCG
Product: proteasome-type protease
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTYCCGVLVRDGLVMIADTRTNAGLDNISTFRKLHIFEEPGHYVMALASAGNLSVSQSVVSLLHEGVEDHEAGERQMIGD CRTMFQAAQLVGRAIRQVHAVDAQALEHSNVSFDVSFLLGGQIAGGPLRLFMVYSAGNFIECTTDTPFLQIGEHKYGKPV LDRAVTYDMEISDALKASLISMDSTMRSNLGVGLPIDVLVLCPNTLEAELNYRIEPGEPYFHDLRERWSAALRAAHSGIP RPPYLKNGRRVIES
Sequences:
>Translated_254_residues MTYCCGVLVRDGLVMIADTRTNAGLDNISTFRKLHIFEEPGHYVMALASAGNLSVSQSVVSLLHEGVEDHEAGERQMIGD CRTMFQAAQLVGRAIRQVHAVDAQALEHSNVSFDVSFLLGGQIAGGPLRLFMVYSAGNFIECTTDTPFLQIGEHKYGKPV LDRAVTYDMEISDALKASLISMDSTMRSNLGVGLPIDVLVLCPNTLEAELNYRIEPGEPYFHDLRERWSAALRAAHSGIP RPPYLKNGRRVIES >Mature_253_residues TYCCGVLVRDGLVMIADTRTNAGLDNISTFRKLHIFEEPGHYVMALASAGNLSVSQSVVSLLHEGVEDHEAGERQMIGDC RTMFQAAQLVGRAIRQVHAVDAQALEHSNVSFDVSFLLGGQIAGGPLRLFMVYSAGNFIECTTDTPFLQIGEHKYGKPVL DRAVTYDMEISDALKASLISMDSTMRSNLGVGLPIDVLVLCPNTLEAELNYRIEPGEPYFHDLRERWSAALRAAHSGIPR PPYLKNGRRVIES
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27922; Mature: 27791
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCCGVLVRDGLVMIADTRTNAGLDNISTFRKLHIFEEPGHYVMALASAGNLSVSQSVV CCHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHH SLLHEGVEDHEAGERQMIGDCRTMFQAAQLVGRAIRQVHAVDAQALEHSNVSFDVSFLLG HHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC GQIAGGPLRLFMVYSAGNFIECTTDTPFLQIGEHKYGKPVLDRAVTYDMEISDALKASLI CCCCCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHHEECCCHHHHHHHHHH SMDSTMRSNLGVGLPIDVLVLCPNTLEAELNYRIEPGEPYFHDLRERWSAALRAAHSGIP HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC RPPYLKNGRRVIES CCCCCCCCHHCCCC >Mature Secondary Structure TYCCGVLVRDGLVMIADTRTNAGLDNISTFRKLHIFEEPGHYVMALASAGNLSVSQSVV CHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCHHHHHHH SLLHEGVEDHEAGERQMIGDCRTMFQAAQLVGRAIRQVHAVDAQALEHSNVSFDVSFLLG HHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC GQIAGGPLRLFMVYSAGNFIECTTDTPFLQIGEHKYGKPVLDRAVTYDMEISDALKASLI CCCCCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHHEECCCHHHHHHHHHH SMDSTMRSNLGVGLPIDVLVLCPNTLEAELNYRIEPGEPYFHDLRERWSAALRAAHSGIP HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC RPPYLKNGRRVIES CCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA