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The map label for this gene is rlpA [C]

Identifier: 158423915

GI number: 158423915

Start: 2616481

End: 2616906

Strand: Direct

Name: rlpA [C]

Synonym: AZC_2291

Alternate gene names: 158423915

Gene position: 2616481-2616906 (Clockwise)

Preceding gene: 158423914

Following gene: 158423922

Centisome position: 48.73

GC content: 62.91

Gene sequence:

>426_bases
TTGGCGACACTTCCATCAACAACAATGGAGGTTGCGGGAATGGAGATCCGAAAAGGGGTTCTGATTGGATCGCTTGCTCT
GACGATGTCGGGCTTGGCGACTGCCGCTTCGGCGGAGCCCAAGCAGACGGGTGTCGCGTCCTACTATTGGCAGGGTCGCG
GCACAGCCAGCGGTGAGCGGTTCAACCCCAACGCCCTGACGGCAGCCCATCGCTCGCTTCCCTTCGGTACGAAGGTTCGC
GTCACCAATCTCAAGAACGGACGCACGGTTGTGGTCCGCATCAACGACCGGGGCCCGTTCGTCCGCGGTCGCATCATCGA
CGTTTCCAAGGCCGCAGCCGGTGAACTCGGGTTCAAGGGCTCCGGCACCACCAAGGTCGCCCTCTCCGTCGTCGAAGACG
AGGGCGGGTTCTTCGCGAGCCGCTGA

Upstream 100 bases:

>100_bases
TGTGGATAAACATTTCCAGCGCCGACCGAGATACCTCTCAGGTTGTGTTTTGCGTTGTAGCGCCTCAGGCGCGTGACATT
CTCGCCCCATTCCGTGGCCA

Downstream 100 bases:

>100_bases
TAGCGGACCGCACGCGGCTCTCGCCGCCACCCCACACGTCAACGGACCAGCGCCTGAACGCGCGCGCTCTGCGTGCGAAT
GCGATGTCCTGCCTGCCCCG

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MATLPSTTMEVAGMEIRKGVLIGSLALTMSGLATAASAEPKQTGVASYYWQGRGTASGERFNPNALTAAHRSLPFGTKVR
VTNLKNGRTVVVRINDRGPFVRGRIIDVSKAAAGELGFKGSGTTKVALSVVEDEGGFFASR

Sequences:

>Translated_141_residues
MATLPSTTMEVAGMEIRKGVLIGSLALTMSGLATAASAEPKQTGVASYYWQGRGTASGERFNPNALTAAHRSLPFGTKVR
VTNLKNGRTVVVRINDRGPFVRGRIIDVSKAAAGELGFKGSGTTKVALSVVEDEGGFFASR
>Mature_140_residues
ATLPSTTMEVAGMEIRKGVLIGSLALTMSGLATAASAEPKQTGVASYYWQGRGTASGERFNPNALTAAHRSLPFGTKVRV
TNLKNGRTVVVRINDRGPFVRGRIIDVSKAAAGELGFKGSGTTKVALSVVEDEGGFFASR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=99, Percent_Identity=44.4444444444444, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 14746; Mature: 14615

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLPSTTMEVAGMEIRKGVLIGSLALTMSGLATAASAEPKQTGVASYYWQGRGTASGER
CCCCCCCCHHHCCCCHHCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC
FNPNALTAAHRSLPFGTKVRVTNLKNGRTVVVRINDRGPFVRGRIIDVSKAAAGELGFKG
CCCCCEEHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
SGTTKVALSVVEDEGGFFASR
CCCEEEEEEEEECCCCEEECC
>Mature Secondary Structure 
ATLPSTTMEVAGMEIRKGVLIGSLALTMSGLATAASAEPKQTGVASYYWQGRGTASGER
CCCCCCCHHHCCCCHHCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC
FNPNALTAAHRSLPFGTKVRVTNLKNGRTVVVRINDRGPFVRGRIIDVSKAAAGELGFKG
CCCCCEEHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCC
SGTTKVALSVVEDEGGFFASR
CCCEEEEEEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]