| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is echA8 [H]
Identifier: 158423811
GI number: 158423811
Start: 2503324
End: 2504148
Strand: Reverse
Name: echA8 [H]
Synonym: AZC_2187
Alternate gene names: 158423811
Gene position: 2504148-2503324 (Counterclockwise)
Preceding gene: 158423817
Following gene: 158423810
Centisome position: 46.63
GC content: 66.06
Gene sequence:
>825_bases ATGAGCGAAGCGTCTGCATCCGAAATGGAAGCTTCCTGGGGATTTATCCGACTACAGCGCGCATCCGGCGTTGCGATCCT CACCCTCGCCCGGCCGGCCAGCCGCAACAGCCTCTCCGACGGCATGATGGCCGATGTGTCTGGCGCGCTGACAGAATTGG CCGATGACGCCAGCGTTCGTGCCATTGTCCTGGACGCCGAAGGCCCGGTCTTCTCCGCCGGCCACGACCTGAAGGAAATT CAGGCGCATCGCAGCGACAACGATCGCGGTCGTACCTATTTCGAATCTGTTCTGGCCCGTTGCTCGGCGCTGATGACCCA GATCGTCCGCCAACCCCAGCCGGTGATCGCCGCCGTGGAGGGCATGGCGACCGCCGCCGGCTGCCAACTGGTCGCGAGCT GCGACCTCGCGGTGGCCGGGGCCGGCGCCCGCTTCTGCACGCCGGGCGTGAACATCGGCCTCTTCTGCCACACGCCCATG GTGGCGCTGTCCCGCTCCGTCGGGCGCAAGCACGCCATGGAGATGCTGTTGCTCGGCGAATGGGTCGAGGCGCCCGAGGC CCATCGTATGGGCCTCGTCAACCGAATCGCTCCGGCCGGCGAGGCGCGATCCTTGGCGCTGGAGCTCGCGCAGAAGATCG CCTCGAAATCGCGGGTCCCGGTGAAACTCGGAAAGGCCGCCTTCTATACGCAGGCCGAGATGGGCCTTGATGACGCCTAT GCCTACGCGTCCCGCGTCATGGCGGAGAACATGATGGCACGCGATGCGGACGAGGGCATTTCGGCGGTGATCGGCAAGCG CACACCGCAATGGGAAGACCGCTGA
Upstream 100 bases:
>100_bases TTCTTCCACTCCCTGTGTAGCTTACATATGACACGAGCAAGCTTGTTTGAAACCTGCATAAAGCGCAGCAATACCCCTAC ATAATACCGGGAGGACGGAA
Downstream 100 bases:
>100_bases GCGACAATTTACCCTTCATCAACCATGCAGGCGCACCCTGAAATCGGACGTCTCCCGCACTCTGGCGGGGACGCAGGAGC GCATGCATGGCCCTCGCCTG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSEASASEMEASWGFIRLQRASGVAILTLARPASRNSLSDGMMADVSGALTELADDASVRAIVLDAEGPVFSAGHDLKEI QAHRSDNDRGRTYFESVLARCSALMTQIVRQPQPVIAAVEGMATAAGCQLVASCDLAVAGAGARFCTPGVNIGLFCHTPM VALSRSVGRKHAMEMLLLGEWVEAPEAHRMGLVNRIAPAGEARSLALELAQKIASKSRVPVKLGKAAFYTQAEMGLDDAY AYASRVMAENMMARDADEGISAVIGKRTPQWEDR
Sequences:
>Translated_274_residues MSEASASEMEASWGFIRLQRASGVAILTLARPASRNSLSDGMMADVSGALTELADDASVRAIVLDAEGPVFSAGHDLKEI QAHRSDNDRGRTYFESVLARCSALMTQIVRQPQPVIAAVEGMATAAGCQLVASCDLAVAGAGARFCTPGVNIGLFCHTPM VALSRSVGRKHAMEMLLLGEWVEAPEAHRMGLVNRIAPAGEARSLALELAQKIASKSRVPVKLGKAAFYTQAEMGLDDAY AYASRVMAENMMARDADEGISAVIGKRTPQWEDR >Mature_273_residues SEASASEMEASWGFIRLQRASGVAILTLARPASRNSLSDGMMADVSGALTELADDASVRAIVLDAEGPVFSAGHDLKEIQ AHRSDNDRGRTYFESVLARCSALMTQIVRQPQPVIAAVEGMATAAGCQLVASCDLAVAGAGARFCTPGVNIGLFCHTPMV ALSRSVGRKHAMEMLLLGEWVEAPEAHRMGLVNRIAPAGEARSLALELAQKIASKSRVPVKLGKAAFYTQAEMGLDDAYA YASRVMAENMMARDADEGISAVIGKRTPQWEDR
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=249, Percent_Identity=47.3895582329317, Blast_Score=231, Evalue=6e-61, Organism=Homo sapiens, GI194097323, Length=256, Percent_Identity=32.421875, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI4502327, Length=256, Percent_Identity=27.34375, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI70995211, Length=224, Percent_Identity=29.0178571428571, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI62530384, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI68989263, Length=204, Percent_Identity=27.9411764705882, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI221136756, Length=251, Percent_Identity=27.4900398406374, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI221136753, Length=251, Percent_Identity=27.4900398406374, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI221307494, Length=251, Percent_Identity=27.4900398406374, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787659, Length=259, Percent_Identity=33.5907335907336, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI221142681, Length=266, Percent_Identity=29.3233082706767, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787660, Length=263, Percent_Identity=30.4182509505703, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87082183, Length=265, Percent_Identity=23.0188679245283, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788597, Length=278, Percent_Identity=26.978417266187, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788682, Length=280, Percent_Identity=25.7142857142857, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17540306, Length=237, Percent_Identity=43.8818565400844, Blast_Score=189, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17554946, Length=259, Percent_Identity=33.5907335907336, Blast_Score=137, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=30.9803921568627, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17560910, Length=248, Percent_Identity=27.0161290322581, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17540714, Length=235, Percent_Identity=30.6382978723404, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17536985, Length=260, Percent_Identity=26.5384615384615, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17549921, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=36.5384615384615, Blast_Score=174, Evalue=5e-44, Organism=Drosophila melanogaster, GI20129971, Length=273, Percent_Identity=31.8681318681319, Blast_Score=147, Evalue=8e-36, Organism=Drosophila melanogaster, GI24653477, Length=273, Percent_Identity=31.8681318681319, Blast_Score=147, Evalue=8e-36, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=27.5193798449612, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI19920382, Length=222, Percent_Identity=31.981981981982, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24654903, Length=183, Percent_Identity=28.9617486338798, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI21357171, Length=250, Percent_Identity=26.4, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24650670, Length=266, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 29153; Mature: 29022
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEASASEMEASWGFIRLQRASGVAILTLARPASRNSLSDGMMADVSGALTELADDASVR CCCCCCHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE AIVLDAEGPVFSAGHDLKEIQAHRSDNDRGRTYFESVLARCSALMTQIVRQPQPVIAAVE EEEEECCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GMATAAGCQLVASCDLAVAGAGARFCTPGVNIGLFCHTPMVALSRSVGRKHAMEMLLLGE HHHHHHHHHHHHHCCEEEECCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH WVEAPEAHRMGLVNRIAPAGEARSLALELAQKIASKSRVPVKLGKAAFYTQAEMGLDDAY HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCHHHH AYASRVMAENMMARDADEGISAVIGKRTPQWEDR HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEASASEMEASWGFIRLQRASGVAILTLARPASRNSLSDGMMADVSGALTELADDASVR CCCCCHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE AIVLDAEGPVFSAGHDLKEIQAHRSDNDRGRTYFESVLARCSALMTQIVRQPQPVIAAVE EEEEECCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GMATAAGCQLVASCDLAVAGAGARFCTPGVNIGLFCHTPMVALSRSVGRKHAMEMLLLGE HHHHHHHHHHHHHCCEEEECCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH WVEAPEAHRMGLVNRIAPAGEARSLALELAQKIASKSRVPVKLGKAAFYTQAEMGLDDAY HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCHHHH AYASRVMAENMMARDADEGISAVIGKRTPQWEDR HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]