| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423800
Identifier: 158423800
GI number: 158423800
Start: 2493457
End: 2494428
Strand: Reverse
Name: 158423800
Synonym: AZC_2176
Alternate gene names: NA
Gene position: 2494428-2493457 (Counterclockwise)
Preceding gene: 158423801
Following gene: 158423794
Centisome position: 46.45
GC content: 66.77
Gene sequence:
>972_bases ATGACACGTCTGACGGCCCTGCTGGCTCTCGCGCTGGCCCTGATCTGCGGCCCCCTGCATGCGCAGGAGGATTATCCCAA CCGGCCGATCCGCCTCATCGTGCCCTTCGCGGCCGGTGGTTCGACGGACATCGTCGCCCGCATCATCGCCGCCAAGATGA GCGAGATCCTGAAGCAGCAGGTGATCGTGGACAATCGCGGCGGCGCCGGCGGCAACCTCGGCGCGGCGGCTGTCGCGAAG GCCGCACCTGACGGTTACACGGTGCTGATGGGGACGGTGGCGACGCACGCCATCAATCCGGCCCTCTACACCAAGATGCC CTACGATCCGGTGAAGGACTTCGCCCCGGTCTCGCTGCTGGTGAACGTGCCCAACGTGGTGATCGTCCACCCCTCGCTGA ACGTGAAGACCACGGAAGAGTTGATCGCCCTGCTGAAGGCCAATCCGGGCAAATATGAATATGCCTCCTCGGGCATCGGC ACGCCGCTGCACCTCTCCGGCGCGCTGTTCGAGAGCATGGCGGGCGTGAAGATGGTGCACGTGCCCTACAAGGGCGCCGG ACCGGCCATGCTGGACGTGGTGAGCGGTCAGGTGAAGATCATGTTCGACAACCTGCCCTCGGCCATCGGCCATATCCGCA AGGGCTCCGTCGTCGGCCTTGCCGTCACCACCAAGGACCGCTCGCCCGCCGCGCCGGACCTGCCCACCGTCTCGGAATCC GGCCTGCCCGGCTATGAGACCTATAGCTGGAACGCCATCTTCGCCCCGGCCGGCACGCCCATGGCCATCATCGACAAGCT GGCCAAGGCCGGCGCGGCGGCCGTGGCCGATCCGGACGTGAAGGCCAAGCTCGCGGACATCAGCGCCGTCTCCGTCGGCA GCACGCCCGATGCACTGGCGGCCCATGTGAAGGCGGAACTCGCCAAATGGGGGCCGGTCGTGAAAGCCTCGGGCGCCTCG ATCAACGAGTGA
Upstream 100 bases:
>100_bases CGCGGCGACGCTCCGTATCTCCGCGGAAAGTTGACGTTACGGCATCCATCCTCCTAATTCCCCTACGGCATGCCCGGCAT GCCGCGTTTGGAGGAACGCC
Downstream 100 bases:
>100_bases TCTGCACGTAGGCGCGCCCCAAAAGCGAAGGCCCGGCGCAGCGCGCCGGGCCTTCGTCATTTTGGCTTTCTGATCGCCGA CGTTCAGCCGGCGGCGGGCG
Product: uptake protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTRLTALLALALALICGPLHAQEDYPNRPIRLIVPFAAGGSTDIVARIIAAKMSEILKQQVIVDNRGGAGGNLGAAAVAK AAPDGYTVLMGTVATHAINPALYTKMPYDPVKDFAPVSLLVNVPNVVIVHPSLNVKTTEELIALLKANPGKYEYASSGIG TPLHLSGALFESMAGVKMVHVPYKGAGPAMLDVVSGQVKIMFDNLPSAIGHIRKGSVVGLAVTTKDRSPAAPDLPTVSES GLPGYETYSWNAIFAPAGTPMAIIDKLAKAGAAAVADPDVKAKLADISAVSVGSTPDALAAHVKAELAKWGPVVKASGAS INE
Sequences:
>Translated_323_residues MTRLTALLALALALICGPLHAQEDYPNRPIRLIVPFAAGGSTDIVARIIAAKMSEILKQQVIVDNRGGAGGNLGAAAVAK AAPDGYTVLMGTVATHAINPALYTKMPYDPVKDFAPVSLLVNVPNVVIVHPSLNVKTTEELIALLKANPGKYEYASSGIG TPLHLSGALFESMAGVKMVHVPYKGAGPAMLDVVSGQVKIMFDNLPSAIGHIRKGSVVGLAVTTKDRSPAAPDLPTVSES GLPGYETYSWNAIFAPAGTPMAIIDKLAKAGAAAVADPDVKAKLADISAVSVGSTPDALAAHVKAELAKWGPVVKASGAS INE >Mature_322_residues TRLTALLALALALICGPLHAQEDYPNRPIRLIVPFAAGGSTDIVARIIAAKMSEILKQQVIVDNRGGAGGNLGAAAVAKA APDGYTVLMGTVATHAINPALYTKMPYDPVKDFAPVSLLVNVPNVVIVHPSLNVKTTEELIALLKANPGKYEYASSGIGT PLHLSGALFESMAGVKMVHVPYKGAGPAMLDVVSGQVKIMFDNLPSAIGHIRKGSVVGLAVTTKDRSPAAPDLPTVSESG LPGYETYSWNAIFAPAGTPMAIIDKLAKAGAAAVADPDVKAKLADISAVSVGSTPDALAAHVKAELAKWGPVVKASGASI NE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33192; Mature: 33061
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLTALLALALALICGPLHAQEDYPNRPIRLIVPFAAGGSTDIVARIIAAKMSEILKQQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VIVDNRGGAGGNLGAAAVAKAAPDGYTVLMGTVATHAINPALYTKMPYDPVKDFAPVSLL HEEECCCCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHCCCHHEECCCCCHHHCCCCEEEE VNVPNVVIVHPSLNVKTTEELIALLKANPGKYEYASSGIGTPLHLSGALFESMAGVKMVH EECCEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCEEEHHHHHHHHCCCEEEE VPYKGAGPAMLDVVSGQVKIMFDNLPSAIGHIRKGSVVGLAVTTKDRSPAAPDLPTVSES ECCCCCCCCEEEECCCEEEEEECCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC GLPGYETYSWNAIFAPAGTPMAIIDKLAKAGAAAVADPDVKAKLADISAVSVGSTPDALA CCCCCCEECCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCHHHHH AHVKAELAKWGPVVKASGASINE HHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure TRLTALLALALALICGPLHAQEDYPNRPIRLIVPFAAGGSTDIVARIIAAKMSEILKQQ HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VIVDNRGGAGGNLGAAAVAKAAPDGYTVLMGTVATHAINPALYTKMPYDPVKDFAPVSLL HEEECCCCCCCCCCHHHHHHCCCCCEEEEEEHHHHHHCCCHHEECCCCCHHHCCCCEEEE VNVPNVVIVHPSLNVKTTEELIALLKANPGKYEYASSGIGTPLHLSGALFESMAGVKMVH EECCEEEEECCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCEEEHHHHHHHHCCCEEEE VPYKGAGPAMLDVVSGQVKIMFDNLPSAIGHIRKGSVVGLAVTTKDRSPAAPDLPTVSES ECCCCCCCCEEEECCCEEEEEECCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCC GLPGYETYSWNAIFAPAGTPMAIIDKLAKAGAAAVADPDVKAKLADISAVSVGSTPDALA CCCCCCEECCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCHHHHH AHVKAELAKWGPVVKASGASINE HHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]