Click here to switch to the map view.

The map label for this gene is deoR [H]

Identifier: 158423714

GI number: 158423714

Start: 2404027

End: 2404878

Strand: Reverse

Name: deoR [H]

Synonym: AZC_2090

Alternate gene names: 158423714

Gene position: 2404878-2404027 (Counterclockwise)

Preceding gene: 158423720

Following gene: 158423713

Centisome position: 44.79

GC content: 69.48

Gene sequence:

>852_bases
ATGCCCCGACGCGCTGCGCCCGAGACCGAAGCCCCCTCCTCTGCCGCCGCGCCTATCGTCTCCGGCGCCGACGCCGCTTC
TCCCGATGTCTCCGGCCGCCAGCAGGCGATCGTGGAACGGGTGCGAGAGCAGGGCTATGTCACCATCGAAACCCTCGCCC
GACTGTTCGACGTTTCCACCCAGACGGTGCGGCGCGACATCATTCGCCTCGATGAAGCCGGCCTCATCCAGCGCTTCCAT
GGCGGCGCGGGCCAGCGAGAGAACACCGCCCGCCCCGCCTACAGCCAGAAGCGCACCACCTCCACGGATGCCAAGCGCGC
CATTGCCGAGGCGTGCGCGCGGATGATCCCAGACGGCGCCTCCGTCTGTCTCGATGTGGGCACGACGGTGGAAGCGGTCG
CGCGCGCGCTTCTGGACCATCGCAGCCTGCATGTGGTCACGACCAGCGTCGGTGCCGCTGCGATCCTCGCGGGTGCGCCG
GTGGGCGACGTGGTGGTGACGGGCGGCCTGATGCGCGGCGCGGACGGCTCGCTTGTGGGCGAGCAGGCGATTGCGACGTT
GAACGGCCTGCGCACGGACTTCGCGGTGATCGGGTGCTCCGGCTTCGATGACGAGGACGGCGCCATCATGGATTTCGATC
CGCTCAAGGTGGCGACCAAGAAGGCCATGATCGCCCGTGCCCGGCGAACCCTTCTGGTGGCCGACGCCACGAAGTTTGCC
CGCTCCGCCGTCGTGCGGGTGGCCGAGTTTGAGGCCGTCTCGACCCTCATCACCGATGCCGCGCCCCCCGACCGTCTCGC
CACGCGTATGGCGGAGGCCGGTTGTCGGCTCGTGGTGGCATCTGGCGACTGA

Upstream 100 bases:

>100_bases
ACGGCTCGACGGACGTTCCGCATTGGCATACGCTAATGCGATGTAAGTTTTCTTACATAGCCGACGAAAAACGCCAAGCG
CCATCCCTGATCGAGTTCCC

Downstream 100 bases:

>100_bases
TGGGTCGACGGCCAGGGCGAAAACCTTACGTTTCGGCCTTTCCTGTGGGGGATTTCACGCGCTCGGACCGGACTTCTTGA
TCCGGTCGCATTCCACAGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MPRRAAPETEAPSSAAAPIVSGADAASPDVSGRQQAIVERVREQGYVTIETLARLFDVSTQTVRRDIIRLDEAGLIQRFH
GGAGQRENTARPAYSQKRTTSTDAKRAIAEACARMIPDGASVCLDVGTTVEAVARALLDHRSLHVVTTSVGAAAILAGAP
VGDVVVTGGLMRGADGSLVGEQAIATLNGLRTDFAVIGCSGFDDEDGAIMDFDPLKVATKKAMIARARRTLLVADATKFA
RSAVVRVAEFEAVSTLITDAAPPDRLATRMAEAGCRLVVASGD

Sequences:

>Translated_283_residues
MPRRAAPETEAPSSAAAPIVSGADAASPDVSGRQQAIVERVREQGYVTIETLARLFDVSTQTVRRDIIRLDEAGLIQRFH
GGAGQRENTARPAYSQKRTTSTDAKRAIAEACARMIPDGASVCLDVGTTVEAVARALLDHRSLHVVTTSVGAAAILAGAP
VGDVVVTGGLMRGADGSLVGEQAIATLNGLRTDFAVIGCSGFDDEDGAIMDFDPLKVATKKAMIARARRTLLVADATKFA
RSAVVRVAEFEAVSTLITDAAPPDRLATRMAEAGCRLVVASGD
>Mature_282_residues
PRRAAPETEAPSSAAAPIVSGADAASPDVSGRQQAIVERVREQGYVTIETLARLFDVSTQTVRRDIIRLDEAGLIQRFHG
GAGQRENTARPAYSQKRTTSTDAKRAIAEACARMIPDGASVCLDVGTTVEAVARALLDHRSLHVVTTSVGAAAILAGAPV
GDVVVTGGLMRGADGSLVGEQAIATLNGLRTDFAVIGCSGFDDEDGAIMDFDPLKVATKKAMIARARRTLLVADATKFAR
SAVVRVAEFEAVSTLITDAAPPDRLATRMAEAGCRLVVASGD

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082344, Length=251, Percent_Identity=41.4342629482072, Blast_Score=200, Evalue=8e-53,
Organism=Escherichia coli, GI1789829, Length=231, Percent_Identity=39.3939393939394, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1789059, Length=248, Percent_Identity=30.6451612903226, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789519, Length=252, Percent_Identity=28.968253968254, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1788069, Length=234, Percent_Identity=32.0512820512821, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789170, Length=232, Percent_Identity=30.6034482758621, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI226510968, Length=252, Percent_Identity=30.5555555555556, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1790753, Length=256, Percent_Identity=30.078125, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1787540, Length=232, Percent_Identity=24.5689655172414, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790635, Length=238, Percent_Identity=23.109243697479, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 29512; Mature: 29381

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRAAPETEAPSSAAAPIVSGADAASPDVSGRQQAIVERVREQGYVTIETLARLFDVST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHCCHH
QTVRRDIIRLDEAGLIQRFHGGAGQRENTARPAYSQKRTTSTDAKRAIAEACARMIPDGA
HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCC
SVCLDVGTTVEAVARALLDHRSLHVVTTSVGAAAILAGAPVGDVVVTGGLMRGADGSLVG
CEEEECCCHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCHHHEECCCEECCCCCHHH
EQAIATLNGLRTDFAVIGCSGFDDEDGAIMDFDPLKVATKKAMIARARRTLLVADATKFA
HHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHEEEEHHHHHH
RSAVVRVAEFEAVSTLITDAAPPDRLATRMAEAGCRLVVASGD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
PRRAAPETEAPSSAAAPIVSGADAASPDVSGRQQAIVERVREQGYVTIETLARLFDVST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHCCHH
QTVRRDIIRLDEAGLIQRFHGGAGQRENTARPAYSQKRTTSTDAKRAIAEACARMIPDGA
HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCC
SVCLDVGTTVEAVARALLDHRSLHVVTTSVGAAAILAGAPVGDVVVTGGLMRGADGSLVG
CEEEECCCHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCHHHEECCCEECCCCCHHH
EQAIATLNGLRTDFAVIGCSGFDDEDGAIMDFDPLKVATKKAMIARARRTLLVADATKFA
HHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHEEEEHHHHHH
RSAVVRVAEFEAVSTLITDAAPPDRLATRMAEAGCRLVVASGD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8752340; 10984043 [H]