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The map label for this gene is yliB [C]

Identifier: 158423704

GI number: 158423704

Start: 2394033

End: 2395868

Strand: Reverse

Name: yliB [C]

Synonym: AZC_2080

Alternate gene names: 158423704

Gene position: 2395868-2394033 (Counterclockwise)

Preceding gene: 158423705

Following gene: 158423703

Centisome position: 44.62

GC content: 65.96

Gene sequence:

>1836_bases
GTGACCGGCCCTGCCGGTCCGCCGAAGGAGCAAGCCGCGTCAGCGGTGAATCTCTCAGGCCCAGAACGGACGGGGCGACC
TTCATCGCACGGGCCGGCCACCGCGCCGCCCCGTGGCGGGCACACGTCGCACGGCAAGAGGCCAGACAAGACACAAGACC
GGCGCTCTCACCTTCCTGACCATCCGACCATTCCGATCCGAGGGGACTGTTGCATGAATTGGTTCAAGACCGAGGTGTCC
GGCCCGCGGCGCAAGGCCCTGAAGACGCTCACCATGGCGTCCGTGCTTGCCCTTGGCCTGTCCTCCCTCGCCCCCGCCGC
CCACGCGGCCGGCACCACCATCCGGGCGGTGATGCACTCGGGCCTGCGCGTGCTGGACCCGATCATCACCACCGCGCACA
TCACGCGCAATCACGGCTACATGATCTATGACACGCTGCTGTCCATGGATGCCAATTACAAACCGCAGCCGCAGATGGCG
GAGTACAAGGTCTCCGACGACGGGCTGACCTACACGCTCACCCTGCGCGACGGCCTGCTGTGGCACGATGGCACGCCGGT
CACCGCCGAAGACTGCGTCGCCTCCCTGAAGCGCTGGGCGCAGCGCGATACCGGCGGCCAGATGCTCATGGACTACGCCG
AGAGCCTCACCGCCGCCGATGCCAAGACCATTGTTCTGAAGCTCAAGAAGCCCTTCGGCCCGACGCTCGAGATGCTGGCC
AAGCCCTCGTCGGTCGTGCCCTTCATGATGCCGAAGCGCATCGCGGAGACGCCCGCCAGCGAGAGCATCACCGACCAGAT
CGGCTCCGGCCCCTTCAAGTTCGTGAAGGCGGAGTTCCAGCCCGGCGTGAAGGTGGTCTACGAGAAGTTCGACAAATACG
TGCCCCGCAAGGAGCCCCCGAGCTGGACCGCCGGCGGCAAGGTCGCCTACGTGGACCGCGTGGAATGGGTGAACATGCCC
GACGCGCAGACGGCGCTGAACGCCATCAACAATGGCGAGATCGATTATATGGAGGCCCCGCCGGTGGACCTCCTGCCGCT
GGCCGAAGCCAATCCGGACATCAAGAAGTTCCGCTGGACGCCCCTCAACACCCAGACCATGGGGCAGATGAACGTCCTTT
ATCCGCCCTTCGACAATGTGAAGATCCGCCGCGCCGCCATGCTGGCGCTCGGGCAGAACGACGTGCTCGCCGCCCTCATC
GGCAATCCCGAATATTTCGCGGCCTGCCCGTCCATGTATGGCTGCGGCGTCCCGCTCTCCACGGATGCCGGCGCGCCCAA
GACCTTCGCCACGGGCGACATCAAGGCCGCGCAGGCGCTGCTGAAGGAGGCGGGCTATGACGGCACCCCCGTCGTCATCC
TCCAGCCCACCGACGTCATCACGGTCGCTCCCCAGCCGGTGGTGGCGGCTCAGGCCCTGCGCAATGCTGGCTTCAAGGTC
ACGCTCCAGCCCATGGACTGGCAGACCCTGGTGACCCGACGCGCCAGCCAGGCCCCGCTGGCCGAAGGCGGATGGAGCCT
GTTCTTCACCAACTGGATCGGCGCCGAAGTCTGGACGCCCCTCGTCAACCCCATGCTCAACACGCGTGGCAAGAAGGGCG
GCTTCTTCGGCTGGCTGGACGATCCGGAAATCATCAAGATGCGCGAGGAGTTCGCCGCGGCCAAGACGCTCGACGAGCAG
AAGGCGGTCGCCACAAAGATCCAGCAGCGCGCCTATGACGACGCGGCCTACGTGCCGCTCGGCAGCTACTACATTCCGGC
CCTTTACCGCACCTCGCTTTCCGGGCTGATCCAGGGACCGGCGCCGCTGTTCTGGAACATCAAGAAAGCCAACTGA

Upstream 100 bases:

>100_bases
GCAGCACCGGGAGAGACCGGATCGATCCGGCACCGAAGGAGCAACCGCCCCGGAAACTCTCAGGTCAAAGGACCGGTGCC
TGCCAGAAGACGTCCGGAGA

Downstream 100 bases:

>100_bases
CGCCGCTGCGCCCGGCCCGCACCGGCCGGGCGCAGCCCCGTTTCCCAGCGAGGGCGATCCATGCTCGCTTATGTTCTCCG
GCGCGTGCTCGCCGCCATCC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MTGPAGPPKEQAASAVNLSGPERTGRPSSHGPATAPPRGGHTSHGKRPDKTQDRRSHLPDHPTIPIRGDCCMNWFKTEVS
GPRRKALKTLTMASVLALGLSSLAPAAHAAGTTIRAVMHSGLRVLDPIITTAHITRNHGYMIYDTLLSMDANYKPQPQMA
EYKVSDDGLTYTLTLRDGLLWHDGTPVTAEDCVASLKRWAQRDTGGQMLMDYAESLTAADAKTIVLKLKKPFGPTLEMLA
KPSSVVPFMMPKRIAETPASESITDQIGSGPFKFVKAEFQPGVKVVYEKFDKYVPRKEPPSWTAGGKVAYVDRVEWVNMP
DAQTALNAINNGEIDYMEAPPVDLLPLAEANPDIKKFRWTPLNTQTMGQMNVLYPPFDNVKIRRAAMLALGQNDVLAALI
GNPEYFAACPSMYGCGVPLSTDAGAPKTFATGDIKAAQALLKEAGYDGTPVVILQPTDVITVAPQPVVAAQALRNAGFKV
TLQPMDWQTLVTRRASQAPLAEGGWSLFFTNWIGAEVWTPLVNPMLNTRGKKGGFFGWLDDPEIIKMREEFAAAKTLDEQ
KAVATKIQQRAYDDAAYVPLGSYYIPALYRTSLSGLIQGPAPLFWNIKKAN

Sequences:

>Translated_611_residues
MTGPAGPPKEQAASAVNLSGPERTGRPSSHGPATAPPRGGHTSHGKRPDKTQDRRSHLPDHPTIPIRGDCCMNWFKTEVS
GPRRKALKTLTMASVLALGLSSLAPAAHAAGTTIRAVMHSGLRVLDPIITTAHITRNHGYMIYDTLLSMDANYKPQPQMA
EYKVSDDGLTYTLTLRDGLLWHDGTPVTAEDCVASLKRWAQRDTGGQMLMDYAESLTAADAKTIVLKLKKPFGPTLEMLA
KPSSVVPFMMPKRIAETPASESITDQIGSGPFKFVKAEFQPGVKVVYEKFDKYVPRKEPPSWTAGGKVAYVDRVEWVNMP
DAQTALNAINNGEIDYMEAPPVDLLPLAEANPDIKKFRWTPLNTQTMGQMNVLYPPFDNVKIRRAAMLALGQNDVLAALI
GNPEYFAACPSMYGCGVPLSTDAGAPKTFATGDIKAAQALLKEAGYDGTPVVILQPTDVITVAPQPVVAAQALRNAGFKV
TLQPMDWQTLVTRRASQAPLAEGGWSLFFTNWIGAEVWTPLVNPMLNTRGKKGGFFGWLDDPEIIKMREEFAAAKTLDEQ
KAVATKIQQRAYDDAAYVPLGSYYIPALYRTSLSGLIQGPAPLFWNIKKAN
>Mature_610_residues
TGPAGPPKEQAASAVNLSGPERTGRPSSHGPATAPPRGGHTSHGKRPDKTQDRRSHLPDHPTIPIRGDCCMNWFKTEVSG
PRRKALKTLTMASVLALGLSSLAPAAHAAGTTIRAVMHSGLRVLDPIITTAHITRNHGYMIYDTLLSMDANYKPQPQMAE
YKVSDDGLTYTLTLRDGLLWHDGTPVTAEDCVASLKRWAQRDTGGQMLMDYAESLTAADAKTIVLKLKKPFGPTLEMLAK
PSSVVPFMMPKRIAETPASESITDQIGSGPFKFVKAEFQPGVKVVYEKFDKYVPRKEPPSWTAGGKVAYVDRVEWVNMPD
AQTALNAINNGEIDYMEAPPVDLLPLAEANPDIKKFRWTPLNTQTMGQMNVLYPPFDNVKIRRAAMLALGQNDVLAALIG
NPEYFAACPSMYGCGVPLSTDAGAPKTFATGDIKAAQALLKEAGYDGTPVVILQPTDVITVAPQPVVAAQALRNAGFKVT
LQPMDWQTLVTRRASQAPLAEGGWSLFFTNWIGAEVWTPLVNPMLNTRGKKGGFFGWLDDPEIIKMREEFAAAKTLDEQK
AVATKIQQRAYDDAAYVPLGSYYIPALYRTSLSGLIQGPAPLFWNIKKAN

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=431, Percent_Identity=27.8422273781903, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1789397, Length=420, Percent_Identity=25.952380952381, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787495, Length=559, Percent_Identity=25.9391771019678, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1789966, Length=391, Percent_Identity=25.0639386189258, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787762, Length=529, Percent_Identity=23.6294896030246, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66500; Mature: 66369

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPAGPPKEQAASAVNLSGPERTGRPSSHGPATAPPRGGHTSHGKRPDKTQDRRSHLPD
CCCCCCCCHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
HPTIPIRGDCCMNWFKTEVSGPRRKALKTLTMASVLALGLSSLAPAAHAAGTTIRAVMHS
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHC
GLRVLDPIITTAHITRNHGYMIYDTLLSMDANYKPQPQMAEYKVSDDGLTYTLTLRDGLL
CHHHHHHHHHHHEEECCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCEEEEEEEECCEE
WHDGTPVTAEDCVASLKRWAQRDTGGQMLMDYAESLTAADAKTIVLKLKKPFGPTLEMLA
EECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHC
KPSSVVPFMMPKRIAETPASESITDQIGSGPFKFVKAEFQPGVKVVYEKFDKYVPRKEPP
CCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC
SWTAGGKVAYVDRVEWVNMPDAQTALNAINNGEIDYMEAPPVDLLPLAEANPDIKKFRWT
CCCCCCEEEEEECEEECCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCHHHEEEC
PLNTQTMGQMNVLYPPFDNVKIRRAAMLALGQNDVLAALIGNPEYFAACPSMYGCGVPLS
CCCCCCCCCEEEECCCCCCCEEHHHHHHHCCCCCEEEEEECCCHHHHCCCCHHCCCCCCC
TDAGAPKTFATGDIKAAQALLKEAGYDGTPVVILQPTDVITVAPQPVVAAQALRNAGFKV
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCCCCEE
TLQPMDWQTLVTRRASQAPLAEGGWSLFFTNWIGAEVWTPLVNPMLNTRGKKGGFFGWLD
EECCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
DPEIIKMREEFAAAKTLDEQKAVATKIQQRAYDDAAYVPLGSYYIPALYRTSLSGLIQGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APLFWNIKKAN
CCEEEEEEECC
>Mature Secondary Structure 
TGPAGPPKEQAASAVNLSGPERTGRPSSHGPATAPPRGGHTSHGKRPDKTQDRRSHLPD
CCCCCCCHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
HPTIPIRGDCCMNWFKTEVSGPRRKALKTLTMASVLALGLSSLAPAAHAAGTTIRAVMHS
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHC
GLRVLDPIITTAHITRNHGYMIYDTLLSMDANYKPQPQMAEYKVSDDGLTYTLTLRDGLL
CHHHHHHHHHHHEEECCCCEEEEEHHHHCCCCCCCCCCCEEEEECCCCEEEEEEEECCEE
WHDGTPVTAEDCVASLKRWAQRDTGGQMLMDYAESLTAADAKTIVLKLKKPFGPTLEMLA
EECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHC
KPSSVVPFMMPKRIAETPASESITDQIGSGPFKFVKAEFQPGVKVVYEKFDKYVPRKEPP
CCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC
SWTAGGKVAYVDRVEWVNMPDAQTALNAINNGEIDYMEAPPVDLLPLAEANPDIKKFRWT
CCCCCCEEEEEECEEECCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCCCCCHHHEEEC
PLNTQTMGQMNVLYPPFDNVKIRRAAMLALGQNDVLAALIGNPEYFAACPSMYGCGVPLS
CCCCCCCCCEEEECCCCCCCEEHHHHHHHCCCCCEEEEEECCCHHHHCCCCHHCCCCCCC
TDAGAPKTFATGDIKAAQALLKEAGYDGTPVVILQPTDVITVAPQPVVAAQALRNAGFKV
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCHHHHHHHHCCCCEE
TLQPMDWQTLVTRRASQAPLAEGGWSLFFTNWIGAEVWTPLVNPMLNTRGKKGGFFGWLD
EECCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
DPEIIKMREEFAAAKTLDEQKAVATKIQQRAYDDAAYVPLGSYYIPALYRTSLSGLIQGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APLFWNIKKAN
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]