| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is tauC [C]
Identifier: 158423681
GI number: 158423681
Start: 2371151
End: 2371930
Strand: Reverse
Name: tauC [C]
Synonym: AZC_2057
Alternate gene names: 158423681
Gene position: 2371930-2371151 (Counterclockwise)
Preceding gene: 158423682
Following gene: 158423680
Centisome position: 44.17
GC content: 70.0
Gene sequence:
>780_bases ATGACACGCCGGTTCGCGGGATGGGGGCGCGGCCTCCTGACGACAGTCGGTCTGATCGGCCTGTGGTGGCTCATCGCGGT CGCCTTCGCGCTGCCGCCCTACATCCTGCCGACGCCGCCGCTTGTGGCGCAGGCGCTCTGGAACGGGCGCTTCTATCTCG CCGGCCACGCGGCGACGACGGCCCTCGAGATCGGCCTCGGCCTGTTCTTCGGCGTGCTCATGGGGGCATCGGTCGCCCTC GCCATGGCGGCCTCGCCCGTCGTGCAGCGGTGGCTGACGCCGCTCATCGTCGTGAGCCAGGCCATCCCGGTCTTTGCGCT GGCGCCCATCCTCGTGCTGTGGCTGGGTTTCGGGCTCGCATCCAAGGTCATGATGGCGGTGCTCATCATCTTCTTTCCCG TCGCCGCCACCTTCCATGACGGGCTGCGGCGAACAGAGCCCGGCTGGCTGGACCTTGCCCGCACCATGCGGGCCAGCCGC GCGGCCGAATTGCGCCACATCCGCCTGATGGCGGCGCTGCCGGCGCTCGGCTCCGGGCTGCGGGTCGCAGCGGCGGTCGC GCCCATCGGGGCGGTCATCGGCGAATGGGTGGGGGCGGCGGGGGGACTCGGCTATGTGATGCTGAACGCCAATGCCCGCA TGCAGACGGCCCTCTGCTTCGCAGCCCTTTTCATCCTCGCGGTGATGGCAGTGGCCTTGTGGCAATTGGTCGATGTGCTT CTCCGCCGCATCCTGTACTGGGTACCCGATGCGGCCGCCGCCAGACGCGGCCCCGACTGA
Upstream 100 bases:
>100_bases CTCCGATGACCGTGCCGGGCGCCGTCCCCCGTCCCGCGGACGCTGCGGCCGTGCTGGAAGCCCAGGGTGCCCTCCTGCGC CGCCTCATAGCGGAGGCCGC
Downstream 100 bases:
>100_bases AAGGACGTGGAATGCTCAGGAAGATGGTTCTCGGCGCGGCGCTCGCCCTGTTCGGCCTCAGCCCCGCCTTTGCGGCCGAC AAGGTGACGGTGCTGCTGGA
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTRRFAGWGRGLLTTVGLIGLWWLIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATTALEIGLGLFFGVLMGASVAL AMAASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLASKVMMAVLIIFFPVAATFHDGLRRTEPGWLDLARTMRASR AAELRHIRLMAALPALGSGLRVAAAVAPIGAVIGEWVGAAGGLGYVMLNANARMQTALCFAALFILAVMAVALWQLVDVL LRRILYWVPDAAAARRGPD
Sequences:
>Translated_259_residues MTRRFAGWGRGLLTTVGLIGLWWLIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATTALEIGLGLFFGVLMGASVAL AMAASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLASKVMMAVLIIFFPVAATFHDGLRRTEPGWLDLARTMRASR AAELRHIRLMAALPALGSGLRVAAAVAPIGAVIGEWVGAAGGLGYVMLNANARMQTALCFAALFILAVMAVALWQLVDVL LRRILYWVPDAAAARRGPD >Mature_258_residues TRRFAGWGRGLLTTVGLIGLWWLIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATTALEIGLGLFFGVLMGASVALA MAASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLASKVMMAVLIIFFPVAATFHDGLRRTEPGWLDLARTMRASRA AELRHIRLMAALPALGSGLRVAAAVAPIGAVIGEWVGAAGGLGYVMLNANARMQTALCFAALFILAVMAVALWQLVDVLL RRILYWVPDAAAARRGPD
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87081802, Length=240, Percent_Identity=28.3333333333333, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27616; Mature: 27484
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRFAGWGRGLLTTVGLIGLWWLIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECHHHHH ALEIGLGLFFGVLMGASVALAMAASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKVMMAVLIIFFPVAATFHDGLRRTEPGWLDLARTMRASRAAELRHIRLMAALPALGSGL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RVAAAVAPIGAVIGEWVGAAGGLGYVMLNANARMQTALCFAALFILAVMAVALWQLVDVL HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRILYWVPDAAAARRGPD HHHHHHHCCCHHHHCCCCC >Mature Secondary Structure TRRFAGWGRGLLTTVGLIGLWWLIAVAFALPPYILPTPPLVAQALWNGRFYLAGHAATT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECHHHHH ALEIGLGLFFGVLMGASVALAMAASPVVQRWLTPLIVVSQAIPVFALAPILVLWLGFGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKVMMAVLIIFFPVAATFHDGLRRTEPGWLDLARTMRASRAAELRHIRLMAALPALGSGL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RVAAAVAPIGAVIGEWVGAAGGLGYVMLNANARMQTALCFAALFILAVMAVALWQLVDVL HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRILYWVPDAAAARRGPD HHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]