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The map label for this gene is potC [H]

Identifier: 158423593

GI number: 158423593

Start: 2271266

End: 2272069

Strand: Reverse

Name: potC [H]

Synonym: AZC_1969

Alternate gene names: 158423593

Gene position: 2272069-2271266 (Counterclockwise)

Preceding gene: 158423594

Following gene: 158423591

Centisome position: 42.31

GC content: 66.17

Gene sequence:

>804_bases
ATGCGGCGCGACTGGGAAACCTTCTCCTTCCACCTCGTCATCGGCCTCATCGCGGTGCTGGCGCTGATCCTGCTGGTGGC
CCCGACGGCGATCGTGCTCATCGTCTCCTTCACCAGCGGCTTCTCCCTGCGCTTTCCTCCGCCCGGCTATTCGCTGCGCT
GGTATGCGGCGCTGTGGGATGCCTGGCAGCTCCAGTTCGCCGCCATGAACAGCCTGAAGGTCGCCGCGTGGGCGACGGGG
CTCTCCATCCTCTTCGGCACGGCGGCGGGGCTCGGCATCTCCCGTTCCTCCCGGCTGTCAGCCAAGCTGATGGACGGGCT
GTTCATGTCGCCCCTCATCCTGCCGGCGCTCGCCTTCGGCCTGTCGTCGCTGATGTTCTTCTCGGCGCTCGGGCTTCCCG
TCTCGCCCTTCACCCTCATCATCGGCCACACGGTGGTGTGCGTGCCCTATGTGGTGCGCAATACGGTGGCGGCGCTCTCC
CAGCTCGATCCGACGCTACTGGAATGCTCCTCAAGCCTCGGGGCGGGCAAGGTCTATACCTTCCGCCGCATCACCCTGCC
GCTGATCCGACCGGGCATCCTCGCCGGCGGGTTCATCGCCTTCATGTCGTCCTTCGACAATGTGCCGGTGTCGCTGTTCC
TGCGCGATGCCGCCACCGACATGCTGCCCATCCGCATGTGGCAGGATCTGGAAGGCAAGCTGGACGTGACCATCGCCGCC
CTCTCCGGCGTTCTGATCGTCTTCACCGTCGCCCTCATCATGGTGATGGAGCGCTTCACCGGCCTGTCGCGGCGCCTCGC
CTGA

Upstream 100 bases:

>100_bases
CATTTCCATCATCTTCCTCGTCGCCGTGCTGGCGGTGGTGATGGTGTTCAACCTGCTCGGCCGCCTGTCGCGCGGCTATG
CCAGCACCTGAGGACGAGCC

Downstream 100 bases:

>100_bases
TCACACGCCGCGAAACAGCTGGATGCCCCAGGGCGTGAACTTGAACGGCAGATGGTAATGCTCCTCCACCCGCGTGACGA
CGAAGCGGAACGGCACGATG

Product: ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRRDWETFSFHLVIGLIAVLALILLVAPTAIVLIVSFTSGFSLRFPPPGYSLRWYAALWDAWQLQFAAMNSLKVAAWATG
LSILFGTAAGLGISRSSRLSAKLMDGLFMSPLILPALAFGLSSLMFFSALGLPVSPFTLIIGHTVVCVPYVVRNTVAALS
QLDPTLLECSSSLGAGKVYTFRRITLPLIRPGILAGGFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVTIAA
LSGVLIVFTVALIMVMERFTGLSRRLA

Sequences:

>Translated_267_residues
MRRDWETFSFHLVIGLIAVLALILLVAPTAIVLIVSFTSGFSLRFPPPGYSLRWYAALWDAWQLQFAAMNSLKVAAWATG
LSILFGTAAGLGISRSSRLSAKLMDGLFMSPLILPALAFGLSSLMFFSALGLPVSPFTLIIGHTVVCVPYVVRNTVAALS
QLDPTLLECSSSLGAGKVYTFRRITLPLIRPGILAGGFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVTIAA
LSGVLIVFTVALIMVMERFTGLSRRLA
>Mature_267_residues
MRRDWETFSFHLVIGLIAVLALILLVAPTAIVLIVSFTSGFSLRFPPPGYSLRWYAALWDAWQLQFAAMNSLKVAAWATG
LSILFGTAAGLGISRSSRLSAKLMDGLFMSPLILPALAFGLSSLMFFSALGLPVSPFTLIIGHTVVCVPYVVRNTVAALS
QLDPTLLECSSSLGAGKVYTFRRITLPLIRPGILAGGFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVTIAA
LSGVLIVFTVALIMVMERFTGLSRRLA

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=209, Percent_Identity=25.8373205741627, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787714, Length=232, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787081, Length=240, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28936; Mature: 28936

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDWETFSFHLVIGLIAVLALILLVAPTAIVLIVSFTSGFSLRFPPPGYSLRWYAALWD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCEEHHHHHHH
AWQLQFAAMNSLKVAAWATGLSILFGTAAGLGISRSSRLSAKLMDGLFMSPLILPALAFG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSSLMFFSALGLPVSPFTLIIGHTVVCVPYVVRNTVAALSQLDPTLLECSSSLGAGKVYT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEE
FRRITLPLIRPGILAGGFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVTIAA
EHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHCCCCCCEEHHHH
LSGVLIVFTVALIMVMERFTGLSRRLA
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRDWETFSFHLVIGLIAVLALILLVAPTAIVLIVSFTSGFSLRFPPPGYSLRWYAALWD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCEEHHHHHHH
AWQLQFAAMNSLKVAAWATGLSILFGTAAGLGISRSSRLSAKLMDGLFMSPLILPALAFG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSSLMFFSALGLPVSPFTLIIGHTVVCVPYVVRNTVAALSQLDPTLLECSSSLGAGKVYT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEE
FRRITLPLIRPGILAGGFIAFMSSFDNVPVSLFLRDAATDMLPIRMWQDLEGKLDVTIAA
EHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHCCCCCCEEHHHH
LSGVLIVFTVALIMVMERFTGLSRRLA
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]