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The map label for this gene is lspL [H]

Identifier: 158423586

GI number: 158423586

Start: 2264494

End: 2265456

Strand: Reverse

Name: lspL [H]

Synonym: AZC_1962

Alternate gene names: 158423586

Gene position: 2265456-2264494 (Counterclockwise)

Preceding gene: 158423587

Following gene: 158423585

Centisome position: 42.19

GC content: 71.75

Gene sequence:

>963_bases
GTGCGGGTTGTGGTGGCGGGCGGAACCGGCTTCGTCGGCTTGAACATCGCGGCCGCCTTCCATGGCGCCGGCCATGAGGT
CGTTCTGTTCGACCGTTCGGCGCCGCCGCCGCTGTTCACCCTCCCCATCCGCTTTGAGCAGGGCGATGTGCGCGACCCGC
AGGCGGTGGTCCGCGCCATGTCCGCCGGCACGGATCTGCTGATCCTCGGGGCCGCCATCACCGCCGGGGCGGAGCGCGAG
ACGCGCGAGCCGGAGACGATCCTCTCCGTCAATCTCGGCGCCCTGCCCGGCCTCATGGAAGCCGCGCGCGCGGCCGGGGC
GCGCCGCATCATCAATCTCAGCTCCGCCGCCGCCTACGGGGCCGCCGCATCGGTGGCGGACGTTATGGATGAGGCCGTCG
CCTGCGATCCGCAGGGGCTCTACAGCATCACCAAGTTCGCTTCCGAGCGGGTGGTTGCCCGGCTCGCGGACCTCTGGGGC
CTGGAAGCCGTCAGCGTCCGGCTCAGTGCCGTCTTCGGTCCCTGGGAGCGGGCGACGGGCGTGCGGGACACGCTGAGCCC
TCAGGCGCAGATGCTGGATGCGGCACGCAACAGGCAGCCTGCCTTGCTCGCCCGCCCCGGCCTGCGAGACTGGATCTATG
CGCCCGACGTTGCGGAGGCAGTGCTGGCGCTCGCCACCGCGCCGCATTGGACCGCGCCCGTCTACAACGTCTCGACCGGC
ACACGCTGGAGCACCCTGGACTGGGGCCGCGCGCTCGCCGCTCACATGCCCGGCTTCACTTGCCGTCTCGCAGAGGCGGG
CGAGACGCCGACAATCGACCTGCACTCCGCCACCGACCGGCCGCCGCTGGCGGTCCATCGCCTTGCCGCCGACATCGGCT
GGAACGCGCGCTTCGGCTGCGCCGACAGCGCCAGCCATCTCGCCCATTGGGCGCGCACGCTCCAGAACGAGGCCATCGCA
TGA

Upstream 100 bases:

>100_bases
TAATTATATTAATCGCCTGTCATTGACCCAGTAGTCCCGCTGACCGACCCTCCCTCTCGAAGACTTGCCTTTCGGGCGGG
CTGACCTCGGGGGGTAGACA

Downstream 100 bases:

>100_bases
CGCTTCAAGGCCGCATCGCCGTCATCACCGGCGCCGCTTCCGGGATCGGCCGCGCCACCGCTGCCCGCCTTGCTGACGCG
GGAGCCGCCGTGGCGCTGGT

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: UDP-glucuronic acid epimerase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRVVVAGGTGFVGLNIAAAFHGAGHEVVLFDRSAPPPLFTLPIRFEQGDVRDPQAVVRAMSAGTDLLILGAAITAGAERE
TREPETILSVNLGALPGLMEAARAAGARRIINLSSAAAYGAAASVADVMDEAVACDPQGLYSITKFASERVVARLADLWG
LEAVSVRLSAVFGPWERATGVRDTLSPQAQMLDAARNRQPALLARPGLRDWIYAPDVAEAVLALATAPHWTAPVYNVSTG
TRWSTLDWGRALAAHMPGFTCRLAEAGETPTIDLHSATDRPPLAVHRLAADIGWNARFGCADSASHLAHWARTLQNEAIA

Sequences:

>Translated_320_residues
MRVVVAGGTGFVGLNIAAAFHGAGHEVVLFDRSAPPPLFTLPIRFEQGDVRDPQAVVRAMSAGTDLLILGAAITAGAERE
TREPETILSVNLGALPGLMEAARAAGARRIINLSSAAAYGAAASVADVMDEAVACDPQGLYSITKFASERVVARLADLWG
LEAVSVRLSAVFGPWERATGVRDTLSPQAQMLDAARNRQPALLARPGLRDWIYAPDVAEAVLALATAPHWTAPVYNVSTG
TRWSTLDWGRALAAHMPGFTCRLAEAGETPTIDLHSATDRPPLAVHRLAADIGWNARFGCADSASHLAHWARTLQNEAIA
>Mature_320_residues
MRVVVAGGTGFVGLNIAAAFHGAGHEVVLFDRSAPPPLFTLPIRFEQGDVRDPQAVVRAMSAGTDLLILGAAITAGAERE
TREPETILSVNLGALPGLMEAARAAGARRIINLSSAAAYGAAASVADVMDEAVACDPQGLYSITKFASERVVARLADLWG
LEAVSVRLSAVFGPWERATGVRDTLSPQAQMLDAARNRQPALLARPGLRDWIYAPDVAEAVLALATAPHWTAPVYNVSTG
TRWSTLDWGRALAAHMPGFTCRLAEAGETPTIDLHSATDRPPLAVHRLAADIGWNARFGCADSASHLAHWARTLQNEAIA

Specific function: Galactose metabolism; third step. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Escherichia coli, GI1786974, Length=278, Percent_Identity=25.5395683453237, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI48994969, Length=264, Percent_Identity=23.1060606060606, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR008089 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.12 [H]

Molecular weight: Translated: 33808; Mature: 33808

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVVAGGTGFVGLNIAAAFHGAGHEVVLFDRSAPPPLFTLPIRFEQGDVRDPQAVVRAM
CEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHH
SAGTDLLILGAAITAGAERETREPETILSVNLGALPGLMEAARAAGARRIINLSSAAAYG
HCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHEEECCHHHHHH
AAASVADVMDEAVACDPQGLYSITKFASERVVARLADLWGLEAVSVRLSAVFGPWERATG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEHHHCCCHHHHCC
VRDTLSPQAQMLDAARNRQPALLARPGLRDWIYAPDVAEAVLALATAPHWTAPVYNVSTG
CHHHCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCC
TRWSTLDWGRALAAHMPGFTCRLAEAGETPTIDLHSATDRPPLAVHRLAADIGWNARFGC
CEECCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
ADSASHLAHWARTLQNEAIA
CCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVVVAGGTGFVGLNIAAAFHGAGHEVVLFDRSAPPPLFTLPIRFEQGDVRDPQAVVRAM
CEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHH
SAGTDLLILGAAITAGAERETREPETILSVNLGALPGLMEAARAAGARRIINLSSAAAYG
HCCCCEEEEEHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHEEECCHHHHHH
AAASVADVMDEAVACDPQGLYSITKFASERVVARLADLWGLEAVSVRLSAVFGPWERATG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEHHHCCCHHHHCC
VRDTLSPQAQMLDAARNRQPALLARPGLRDWIYAPDVAEAVLALATAPHWTAPVYNVSTG
CHHHCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCC
TRWSTLDWGRALAAHMPGFTCRLAEAGETPTIDLHSATDRPPLAVHRLAADIGWNARFGC
CEECCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
ADSASHLAHWARTLQNEAIA
CCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9765575; 11481430 [H]