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The map label for this gene is acoR [H]

Identifier: 158423542

GI number: 158423542

Start: 2215584

End: 2216549

Strand: Reverse

Name: acoR [H]

Synonym: AZC_1918

Alternate gene names: 158423542

Gene position: 2216549-2215584 (Counterclockwise)

Preceding gene: 158423547

Following gene: 158423541

Centisome position: 41.28

GC content: 70.39

Gene sequence:

>966_bases
ATGAACAGGGTTTCGTCGCAGCATGCCGACAGGATCGAGACCGCCATCCGTTCCGGCGGGGCGGTGAGTTCCGCCCTTGT
TGCCTCCTGGCAGCGGTCCGTCGCCCTCTATCGCCTCGACCCCACGGAGCGGCGCTCGCCCCAGCGGCTGGAACAGCAGA
AGCTCTCCGAAGCGCGGCAGCGGCTCGAGCCCATGCTGCGGGCCGCGCAGGCGAGCCTCGACCGGCTCTTCCTCGCCGTC
GGCGGCATGGGATGCTGCGTGCTGATCGCCGACCGGGAGGGCATTCCTGTGGAACGCAGGGGCCTTGCCGGCGACGACGA
CACGTTCGAGCGGTGGGGCCTCTGGCCGGGCTGCATCTGGAGCGAGGAGCACGAGGGCACCAACGGCATCGGCACCTGCC
TTGCCGAGCAGCGGGCGCTGACCATCCATCGCGACCAGCACTTCTTCGCCCGCAACACGCTCCTGTCCTGCACCACCGTG
CCCATCCACGACCATGAGGGCCACATCGCTGCCGCCCTCGACGTCTCCTCCTGCCGGAGCGGCCTGACGGAGGAACTGGT
GAATGTGATCGCCCTCGCCACGGGCGACGCCGCCCGGCGGATCGAGGCGGAAAACTTCCGCCAGGCCTTCCCGAACGCCC
GCATCGTCGTGGCGCGCATGGATGACTGGTCGCCGCACGCTTTGCTCGCGGTGGACGGCGAGGACATCATCGTCGGCGCC
ACCCGCGCCGCACGGCAGGCCTACCGCCATCTCGGCGCAGTCATCGGCAAGCCTTTGTCGCTGACCGACGGAGCGGCAGG
CGGACAGGGCTTCGATGCGGAGCTGCGGCAGGCCGAGCGGGCCATCCTGGAACGGGCCCTCATCCGCGCGGGCGGGAACG
TCACGGCGGCCGCCCGGCAGCTCGGCCTTTCGCGGGCGACCCTTCACCGCAAGCTGGGAAAGCTCGGCCTCGAACGGGCC
AACTGA

Upstream 100 bases:

>100_bases
CGGCAAAAGACCGGTCGGACCGATGCCGTCTGTCCAGACCGACACCGCCATTCGGCGCGAAAACGCGACGCTGGCGGAGA
CCTCCGGGGAGGAGCCAGTG

Downstream 100 bases:

>100_bases
ATATTGCACCGCACAGTGTCGCAGGCCTGCGACACATGGCACCGGCGGGGCCACGCGCCCCCGCTGACAGCCGGTCCCGG
CCGACGGACCATGCCTTCAC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNRVSSQHADRIETAIRSGGAVSSALVASWQRSVALYRLDPTERRSPQRLEQQKLSEARQRLEPMLRAAQASLDRLFLAV
GGMGCCVLIADREGIPVERRGLAGDDDTFERWGLWPGCIWSEEHEGTNGIGTCLAEQRALTIHRDQHFFARNTLLSCTTV
PIHDHEGHIAAALDVSSCRSGLTEELVNVIALATGDAARRIEAENFRQAFPNARIVVARMDDWSPHALLAVDGEDIIVGA
TRAARQAYRHLGAVIGKPLSLTDGAAGGQGFDAELRQAERAILERALIRAGGNVTAAARQLGLSRATLHRKLGKLGLERA
N

Sequences:

>Translated_321_residues
MNRVSSQHADRIETAIRSGGAVSSALVASWQRSVALYRLDPTERRSPQRLEQQKLSEARQRLEPMLRAAQASLDRLFLAV
GGMGCCVLIADREGIPVERRGLAGDDDTFERWGLWPGCIWSEEHEGTNGIGTCLAEQRALTIHRDQHFFARNTLLSCTTV
PIHDHEGHIAAALDVSSCRSGLTEELVNVIALATGDAARRIEAENFRQAFPNARIVVARMDDWSPHALLAVDGEDIIVGA
TRAARQAYRHLGAVIGKPLSLTDGAAGGQGFDAELRQAERAILERALIRAGGNVTAAARQLGLSRATLHRKLGKLGLERA
N
>Mature_321_residues
MNRVSSQHADRIETAIRSGGAVSSALVASWQRSVALYRLDPTERRSPQRLEQQKLSEARQRLEPMLRAAQASLDRLFLAV
GGMGCCVLIADREGIPVERRGLAGDDDTFERWGLWPGCIWSEEHEGTNGIGTCLAEQRALTIHRDQHFFARNTLLSCTTV
PIHDHEGHIAAALDVSSCRSGLTEELVNVIALATGDAARRIEAENFRQAFPNARIVVARMDDWSPHALLAVDGEDIIVGA
TRAARQAYRHLGAVIGKPLSLTDGAAGGQGFDAELRQAERAILERALIRAGGNVTAAARQLGLSRATLHRKLGKLGLERA
N

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 34912; Mature: 34912

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVSSQHADRIETAIRSGGAVSSALVASWQRSVALYRLDPTERRSPQRLEQQKLSEARQ
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCHHCCCHHHHHHHHHHHHHH
RLEPMLRAAQASLDRLFLAVGGMGCCVLIADREGIPVERRGLAGDDDTFERWGLWPGCIW
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCCCCCHHHHCCCCCCCC
SEEHEGTNGIGTCLAEQRALTIHRDQHFFARNTLLSCTTVPIHDHEGHIAAALDVSSCRS
CCCCCCCCHHHHHHHHHCEEEEECCCHHHHHCCEEEEEEEEEECCCCCEEEEEEHHHHHC
GLTEELVNVIALATGDAARRIEAENFRQAFPNARIVVARMDDWSPHALLAVDGEDIIVGA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCEEEEEC
TRAARQAYRHLGAVIGKPLSLTDGAAGGQGFDAELRQAERAILERALIRAGGNVTAAARQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGLSRATLHRKLGKLGLERAN
HCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRVSSQHADRIETAIRSGGAVSSALVASWQRSVALYRLDPTERRSPQRLEQQKLSEARQ
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCHHCCCHHHHHHHHHHHHHH
RLEPMLRAAQASLDRLFLAVGGMGCCVLIADREGIPVERRGLAGDDDTFERWGLWPGCIW
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCCCCCHHHHCCCCCCCC
SEEHEGTNGIGTCLAEQRALTIHRDQHFFARNTLLSCTTVPIHDHEGHIAAALDVSSCRS
CCCCCCCCHHHHHHHHHCEEEEECCCHHHHHCCEEEEEEEEEECCCCCEEEEEEHHHHHC
GLTEELVNVIALATGDAARRIEAENFRQAFPNARIVVARMDDWSPHALLAVDGEDIIVGA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCEEEEEC
TRAARQAYRHLGAVIGKPLSLTDGAAGGQGFDAELRQAERAILERALIRAGGNVTAAARQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGLSRATLHRKLGKLGLERAN
HCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]