Click here to switch to the map view.

The map label for this gene is hyaC [C]

Identifier: 158423446

GI number: 158423446

Start: 2084360

End: 2085079

Strand: Reverse

Name: hyaC [C]

Synonym: AZC_1822

Alternate gene names: 158423446

Gene position: 2085079-2084360 (Counterclockwise)

Preceding gene: 158423448

Following gene: 158423442

Centisome position: 38.83

GC content: 66.81

Gene sequence:

>720_bases
TTGGCGGCGCGAGAGGGATACGCAAGAGACGGTCTCGAAACGAGAGGGGTTCTGATGTCGAGCACGCCGCTGCGCAAGGT
CACGGTCTGGGACGCGCCCACGCGCCTGTTCCACTGGTCGCTGGTCCTGCTGATCGCCGCCGCCTATCTGACGGCCGAGT
TCGGCCTGATCGACTGGCACTTCCGCGCCGGCTACGCGATCATCGCTTTGCTGCTGTTCCGTCTGGCCTGGGGATTCGTG
GGCAGCGACACGGCGCGCTTCTCGCGCTTCCTCCAGAACCCGCTGAAGGCCATCCAGCACCTCGCCCACTTCACCCGCCG
CGAGCCGGACACCGAGATCGGCCACAACGCCGCCGGCGGCTGGATGGTGCTGGTCCTGCTGGCGCTGCTGCTCATCCAGG
TGGGCACGGGCCTGTTCTCGAACGATCAGGTCTTCTCGGAAGGCCCGCTCGCCAAATATGTGGGCTCCGCCATGAGCGAC
CGTCTCACGGGCCTACACGAGCTCAATTTCAACCTGATCCTGATCGCGGTGATCCTGCACGTCCTGGCCGTGATGGCCTA
TGCGCTGGTGAAGCGCCACGATCTGGTCCGGCCCATGGTGACGGGCTGGAAGCGCCTGCCGGAGAGCATGCCCGCGCCGC
GCATGGCCAATGCCGGGCTCGCGGTCGTCCTGTTCGCGGTGGCGGCGGGCATCGCCTGGTTCATCTCGACCCTCGGCTGA

Upstream 100 bases:

>100_bases
ACGTAACGTCGCCTCCCTTGATATGGGACAAGGGCGATGCCGGCCGCCGATCATTTCGACGTGCGCGCGCCAAAGGCCGT
GAAATTCACGCTTTTGTCGC

Downstream 100 bases:

>100_bases
GGCCCAAACGAAAAGGGCCGCACCCGAAGGCGCGGCCCGATTGCCCTGACCGGTGAATGCGCTCAGCGCTGCTGGTAGCT
CTGGTGGCAGGCGCGGCACT

Product: hydrogenase cytochrome b-type subunit protein

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAAREGYARDGLETRGVLMSSTPLRKVTVWDAPTRLFHWSLVLLIAAAYLTAEFGLIDWHFRAGYAIIALLLFRLAWGFV
GSDTARFSRFLQNPLKAIQHLAHFTRREPDTEIGHNAAGGWMVLVLLALLLIQVGTGLFSNDQVFSEGPLAKYVGSAMSD
RLTGLHELNFNLILIAVILHVLAVMAYALVKRHDLVRPMVTGWKRLPESMPAPRMANAGLAVVLFAVAAGIAWFISTLG

Sequences:

>Translated_239_residues
MAAREGYARDGLETRGVLMSSTPLRKVTVWDAPTRLFHWSLVLLIAAAYLTAEFGLIDWHFRAGYAIIALLLFRLAWGFV
GSDTARFSRFLQNPLKAIQHLAHFTRREPDTEIGHNAAGGWMVLVLLALLLIQVGTGLFSNDQVFSEGPLAKYVGSAMSD
RLTGLHELNFNLILIAVILHVLAVMAYALVKRHDLVRPMVTGWKRLPESMPAPRMANAGLAVVLFAVAAGIAWFISTLG
>Mature_238_residues
AAREGYARDGLETRGVLMSSTPLRKVTVWDAPTRLFHWSLVLLIAAAYLTAEFGLIDWHFRAGYAIIALLLFRLAWGFVG
SDTARFSRFLQNPLKAIQHLAHFTRREPDTEIGHNAAGGWMVLVLLALLLIQVGTGLFSNDQVFSEGPLAKYVGSAMSDR
LTGLHELNFNLILIAVILHVLAVMAYALVKRHDLVRPMVTGWKRLPESMPAPRMANAGLAVVLFAVAAGIAWFISTLG

Specific function: Probable B-Type Cytochrome. [C]

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26320; Mature: 26189

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAREGYARDGLETRGVLMSSTPLRKVTVWDAPTRLFHWSLVLLIAAAYLTAEFGLIDWH
CCCCCCCCCCCCHHCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEHH
FRAGYAIIALLLFRLAWGFVGSDTARFSRFLQNPLKAIQHLAHFTRREPDTEIGHNAAGG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
WMVLVLLALLLIQVGTGLFSNDQVFSEGPLAKYVGSAMSDRLTGLHELNFNLILIAVILH
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VLAVMAYALVKRHDLVRPMVTGWKRLPESMPAPRMANAGLAVVLFAVAAGIAWFISTLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAREGYARDGLETRGVLMSSTPLRKVTVWDAPTRLFHWSLVLLIAAAYLTAEFGLIDWH
CCCCCCCCCCCHHCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEHH
FRAGYAIIALLLFRLAWGFVGSDTARFSRFLQNPLKAIQHLAHFTRREPDTEIGHNAAGG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
WMVLVLLALLLIQVGTGLFSNDQVFSEGPLAKYVGSAMSDRLTGLHELNFNLILIAVILH
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VLAVMAYALVKRHDLVRPMVTGWKRLPESMPAPRMANAGLAVVLFAVAAGIAWFISTLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA