Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is gpmB [H]

Identifier: 158423375

GI number: 158423375

Start: 2002418

End: 2003008

Strand: Reverse

Name: gpmB [H]

Synonym: AZC_1751

Alternate gene names: 158423375

Gene position: 2003008-2002418 (Counterclockwise)

Preceding gene: 158423376

Following gene: 158423373

Centisome position: 37.3

GC content: 70.56

Gene sequence:

>591_bases
ATGACGGGTCGGCGCCGCCTCTTTCTCGTTCGGCATGGCGAGACCGACTGGAACGTGGCCGGCCGGCTCCAGGGGCGGCG
CGACATCCCTCTTAACAGCCTCGGGCGTGCCCAGGCGGCGCGCGTCGGCCGTGTGCTGCCGCAGCTCGCGGGTGAGGCCT
CCGGCCTGCATTTCGTCTCCAGCCCGCTCGGGCGGGCGCTGGAGACCATGCGCATCCTGCGCACCACCATGAACCTGCCG
GCCTCCGACTTCGCCCATGACCCGCAATTGGCCGAACTCTCCTTCGGCCAGTGGGAAGGCATGACGTGGCCCGAGATCCG
CCGCCGCGACACAGAAGGGGTGCGCACCCGCGAGCGCGATCCCTGGAGTTTCGTGCCGCCGGAGGGGGAGAGCTATGCCG
GCCTTGCCCACAGGGCCGGTGCCGCCATCGACCGCATCAAGGGTGATGGCGTGGTGGTGACCCATGGCGGCGTCATCCGC
GCCCTGCTGCACGCCAGGGCCGGCATGCCGGCCAACGAGGCTGCCGTGGTGCCGATCCGCCAGGGCGCCATCTATGTGCT
GAGCGACGGCGCCTTCGAGGTGAAGGACTAG

Upstream 100 bases:

>100_bases
GCGTCGTCGTGCGCGGCAGCGGCACGGGCAAGGCCCACATCCGCGTGGCCTACCCGCCGCTCGGCCAGTGGTACGATCAT
TATCTGACGCTGCCGGCGCG

Downstream 100 bases:

>100_bases
GCGTTGGTCCCCGGGACGGCCCTCAGGCCGTCCGGAGCGTCTTCTGCCGGTGCAGGACCGGCGGGCGGGAGATCAGCAGC
TTGTCGATGCGCCGCCCGTC

Product: phosphoglycerate mutase

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVSSPLGRALETMRILRTTMNLP
ASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERDPWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIR
ALLHARAGMPANEAAVVPIRQGAIYVLSDGAFEVKD

Sequences:

>Translated_196_residues
MTGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVSSPLGRALETMRILRTTMNLP
ASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERDPWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIR
ALLHARAGMPANEAAVVPIRQGAIYVLSDGAFEVKD
>Mature_195_residues
TGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVSSPLGRALETMRILRTTMNLPA
SDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERDPWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIRA
LLHARAGMPANEAAVVPIRQGAIYVLSDGAFEVKD

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786857, Length=183, Percent_Identity=28.9617486338798, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790856, Length=180, Percent_Identity=31.6666666666667, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 21463; Mature: 21332

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVS
CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
SPLGRALETMRILRTTMNLPASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERD
HHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
PWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIRALLHARAGMPANEAAVVPIR
CCCCCCCCCCCCCCHHHHHCHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEEEC
QGAIYVLSDGAFEVKD
CCEEEEEECCEEEECC
>Mature Secondary Structure 
TGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVS
CCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
SPLGRALETMRILRTTMNLPASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERD
HHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
PWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIRALLHARAGMPANEAAVVPIR
CCCCCCCCCCCCCCHHHHHCHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEEEC
QGAIYVLSDGAFEVKD
CCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA