| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gpmB [H]
Identifier: 158423375
GI number: 158423375
Start: 2002418
End: 2003008
Strand: Reverse
Name: gpmB [H]
Synonym: AZC_1751
Alternate gene names: 158423375
Gene position: 2003008-2002418 (Counterclockwise)
Preceding gene: 158423376
Following gene: 158423373
Centisome position: 37.3
GC content: 70.56
Gene sequence:
>591_bases ATGACGGGTCGGCGCCGCCTCTTTCTCGTTCGGCATGGCGAGACCGACTGGAACGTGGCCGGCCGGCTCCAGGGGCGGCG CGACATCCCTCTTAACAGCCTCGGGCGTGCCCAGGCGGCGCGCGTCGGCCGTGTGCTGCCGCAGCTCGCGGGTGAGGCCT CCGGCCTGCATTTCGTCTCCAGCCCGCTCGGGCGGGCGCTGGAGACCATGCGCATCCTGCGCACCACCATGAACCTGCCG GCCTCCGACTTCGCCCATGACCCGCAATTGGCCGAACTCTCCTTCGGCCAGTGGGAAGGCATGACGTGGCCCGAGATCCG CCGCCGCGACACAGAAGGGGTGCGCACCCGCGAGCGCGATCCCTGGAGTTTCGTGCCGCCGGAGGGGGAGAGCTATGCCG GCCTTGCCCACAGGGCCGGTGCCGCCATCGACCGCATCAAGGGTGATGGCGTGGTGGTGACCCATGGCGGCGTCATCCGC GCCCTGCTGCACGCCAGGGCCGGCATGCCGGCCAACGAGGCTGCCGTGGTGCCGATCCGCCAGGGCGCCATCTATGTGCT GAGCGACGGCGCCTTCGAGGTGAAGGACTAG
Upstream 100 bases:
>100_bases GCGTCGTCGTGCGCGGCAGCGGCACGGGCAAGGCCCACATCCGCGTGGCCTACCCGCCGCTCGGCCAGTGGTACGATCAT TATCTGACGCTGCCGGCGCG
Downstream 100 bases:
>100_bases GCGTTGGTCCCCGGGACGGCCCTCAGGCCGTCCGGAGCGTCTTCTGCCGGTGCAGGACCGGCGGGCGGGAGATCAGCAGC TTGTCGATGCGCCGCCCGTC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVSSPLGRALETMRILRTTMNLP ASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERDPWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIR ALLHARAGMPANEAAVVPIRQGAIYVLSDGAFEVKD
Sequences:
>Translated_196_residues MTGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVSSPLGRALETMRILRTTMNLP ASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERDPWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIR ALLHARAGMPANEAAVVPIRQGAIYVLSDGAFEVKD >Mature_195_residues TGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVSSPLGRALETMRILRTTMNLPA SDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERDPWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIRA LLHARAGMPANEAAVVPIRQGAIYVLSDGAFEVKD
Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786857, Length=183, Percent_Identity=28.9617486338798, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790856, Length=180, Percent_Identity=31.6666666666667, Blast_Score=70, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 21463; Mature: 21332
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVS CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH SPLGRALETMRILRTTMNLPASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERD HHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCC PWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIRALLHARAGMPANEAAVVPIR CCCCCCCCCCCCCCHHHHHCHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEEEC QGAIYVLSDGAFEVKD CCEEEEEECCEEEECC >Mature Secondary Structure TGRRRLFLVRHGETDWNVAGRLQGRRDIPLNSLGRAQAARVGRVLPQLAGEASGLHFVS CCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH SPLGRALETMRILRTTMNLPASDFAHDPQLAELSFGQWEGMTWPEIRRRDTEGVRTRERD HHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCC PWSFVPPEGESYAGLAHRAGAAIDRIKGDGVVVTHGGVIRALLHARAGMPANEAAVVPIR CCCCCCCCCCCCCCHHHHHCHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEEEC QGAIYVLSDGAFEVKD CCEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA