| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is nqo3 [H]
Identifier: 158423298
GI number: 158423298
Start: 1914571
End: 1916646
Strand: Direct
Name: nqo3 [H]
Synonym: AZC_1674
Alternate gene names: 158423298
Gene position: 1914571-1916646 (Clockwise)
Preceding gene: 158423297
Following gene: 158423299
Centisome position: 35.65
GC content: 69.08
Gene sequence:
>2076_bases ATGAGCAAGATCATCGTCGACGGGACAGAGGTTGACGTCCCCGCCGAGTACACGCTGCTCCAGGCGTGTGAGGTGGCGGG CGTGGAGATTCCGCGCTTCTGCTTCCATGAACGCCTGTCCATCGCCGGCAACTGCCGCATGTGCCTCGTCGAGGTGAAGG GCGGCCCGCCCAAGCCCACCGCCTCCTGCGCCATGGCGGTGAAGGATCTGCGCCCCGGCCCGAACGGCGAGCCCCCGGTC GTGCTCACCAAGAGCCCGATGGTGAAGAAGGCCCGCGAAGGGGTGATGGAGTTCCTCCTCATCAACCACCCCCTCGACTG CCCCATCTGCGACCAGGGCGGCGAGTGCGACCTTCAGGACCAGGCCATGGCCTATGGCGTGGATAGTTCTCGCTTCGCCG AGAACAAGCGCGCCGTGGAAGACAAGTACATCGGCCCGCTGGTGCGCACCTCCATGAACCGGTGCATCCACTGCACCCGC TGCGTGCGCTTCTCGACCGAAGTCGCTGGCGTGCCGGACCTCGGCGCCATCGGCCGCGGCGAGGACATGGAGATCACCAC CTATCTCGAGCACGCCATGCGCTCTGAGATGCAGGGCAATGTGGCGGACCTCTGCCCGGTGGGCGCGTTGACCCACAAGC CCTACGCCTTCCACGCCCGGCCGTGGGAACTGGCGAAGACCGAGTCCATCGACGTGATGGATGCGGTCGGCTCCAACATC CGCATCGACACCCGTGGCCGTGAGGTCATGCGCATCCTCCCCCGCGTCCATGAGGGCGTGAACGAGGAGTGGATCTCCGA CAAGACCCGCTACGTGTGGGATGGCCTGAAGACCCAGCGCCTCGATCGGCCCTACGTGCGCCAGAACGGCCGCCTCGTGC CGGCCAGCTGGAGCCAGGCCTTCGATGCCATCGCCGCCAAGGTGAAGGCGACCCCGGCGGCCCGTCTCGGCGCCATCGCC GGCGACCTCGCCACGACGGAAGAGCTGTTCGCTTTGAAGCAGCTCATGGGCAAGCTGGGAACGGCCAACGTCGACGCGCG CCAGGATGGCGCCGCCCTCGATCCGGCGCTCGGCCGCGCGTCCTACGTCTTCAATCCCGCCATCGTCGGGATCGAGGAAG CGGATGCCATCCTGCTGGTGGGCACCGATCCCCGCCACGAGGCCTCCGTCCTCAACGCCCGCATCCGCAAGCGCTGGCGC CAGGGCGGCCTCAAGGTCGCGCTCATCGGCGAGCGGGTCGATCTGACCTATCCCTATGAGTATCTCGGCGCCGGCCCGGA CACGCTCGCGGACCTCACCGGCGGCGGCACCTTTGCCGACGTTCTGAAGGGCGCGCAGCGTCCGCTGGTGATCGTTGGGC AGGGCGCCATCGCCCGCGCCGACGGCGCCGCCATCCTGTCGCTGGCCGCACGCCTCGCGGTGTCTGTGGGCGCGGTGAAG GACGGCTGGAACGGCTTTGCGGTGCTGCACACGGCGGCGAGCCGCGTCGGCGCGCTCGACATCGGCTTCGTGCCGGGGCA GGGCGGTCTCACCGCCAAGGCCATGGCCGAGGGCGGCGTGGACACGCTGTTCCTGCTCGGTGCGGATGAGATCGAGGTCG CTCCCGGCGCCTTCGTCGTCTACATCGGCACCCATGGCGACAAGGGCGCGCACCGCGCCGACGTCATCCTGCCCGGTGCC GCTTATTCCGAGAAGTCCGGCCTCTATGTGAACACGGAAGGCCGTCCGCAGTTCGCCAACCGCGCGGCCTTCCCGCCCGG TGAGGCGCGCGAGGACTGGGCCGTGCTCCGCGCCCTCTCCGAAGTGCTCGGCCAGAAGCTGCCCTACGACACGCTGTTCG CTTTGCGCGCGGCGCTGGTGTCGGCTCATCCGCACCTCGGCCGCCTCGACGAGATCGAGCCGACGGATGTCTCGGTGGTG GCCAAGGTGGCCGGCCTCGGCGGCACGCCGGACAAGGCTCCGTTCGCGCTGGCCGTGCGCGACTTCTATCTGACCAATCC CATCGCGCGGTCTTCCGCCGTGATGGCCGAATGCTCCGCGCTCCGCCTCGGCGGAACCGCCGTGGCGGCGGAGTGA
Upstream 100 bases:
>100_bases TGGGCAGCCGTCTCGACGGCATGACCATCGACGGCGTTGCGGTGACGGATCTCTTGGCTGCGTGGAACGCGGCTCAAGCG GGCGGTAAGGCGGACGAATA
Downstream 100 bases:
>100_bases GTGATGCGCGCGCAGGATCAATCTGACCGCGGGTGCCGGGCGACTGCCCGCACCGGCCGGAACTGAGGGCGAGTAGAACC CATGAGTTGGCAGGACACCC
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I, chain 3; NDH-1, chain 3 [H]
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MSKIIVDGTEVDVPAEYTLLQACEVAGVEIPRFCFHERLSIAGNCRMCLVEVKGGPPKPTASCAMAVKDLRPGPNGEPPV VLTKSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDSSRFAENKRAVEDKYIGPLVRTSMNRCIHCTR CVRFSTEVAGVPDLGAIGRGEDMEITTYLEHAMRSEMQGNVADLCPVGALTHKPYAFHARPWELAKTESIDVMDAVGSNI RIDTRGREVMRILPRVHEGVNEEWISDKTRYVWDGLKTQRLDRPYVRQNGRLVPASWSQAFDAIAAKVKATPAARLGAIA GDLATTEELFALKQLMGKLGTANVDARQDGAALDPALGRASYVFNPAIVGIEEADAILLVGTDPRHEASVLNARIRKRWR QGGLKVALIGERVDLTYPYEYLGAGPDTLADLTGGGTFADVLKGAQRPLVIVGQGAIARADGAAILSLAARLAVSVGAVK DGWNGFAVLHTAASRVGALDIGFVPGQGGLTAKAMAEGGVDTLFLLGADEIEVAPGAFVVYIGTHGDKGAHRADVILPGA AYSEKSGLYVNTEGRPQFANRAAFPPGEAREDWAVLRALSEVLGQKLPYDTLFALRAALVSAHPHLGRLDEIEPTDVSVV AKVAGLGGTPDKAPFALAVRDFYLTNPIARSSAVMAECSALRLGGTAVAAE
Sequences:
>Translated_691_residues MSKIIVDGTEVDVPAEYTLLQACEVAGVEIPRFCFHERLSIAGNCRMCLVEVKGGPPKPTASCAMAVKDLRPGPNGEPPV VLTKSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDSSRFAENKRAVEDKYIGPLVRTSMNRCIHCTR CVRFSTEVAGVPDLGAIGRGEDMEITTYLEHAMRSEMQGNVADLCPVGALTHKPYAFHARPWELAKTESIDVMDAVGSNI RIDTRGREVMRILPRVHEGVNEEWISDKTRYVWDGLKTQRLDRPYVRQNGRLVPASWSQAFDAIAAKVKATPAARLGAIA GDLATTEELFALKQLMGKLGTANVDARQDGAALDPALGRASYVFNPAIVGIEEADAILLVGTDPRHEASVLNARIRKRWR QGGLKVALIGERVDLTYPYEYLGAGPDTLADLTGGGTFADVLKGAQRPLVIVGQGAIARADGAAILSLAARLAVSVGAVK DGWNGFAVLHTAASRVGALDIGFVPGQGGLTAKAMAEGGVDTLFLLGADEIEVAPGAFVVYIGTHGDKGAHRADVILPGA AYSEKSGLYVNTEGRPQFANRAAFPPGEAREDWAVLRALSEVLGQKLPYDTLFALRAALVSAHPHLGRLDEIEPTDVSVV AKVAGLGGTPDKAPFALAVRDFYLTNPIARSSAVMAECSALRLGGTAVAAE >Mature_690_residues SKIIVDGTEVDVPAEYTLLQACEVAGVEIPRFCFHERLSIAGNCRMCLVEVKGGPPKPTASCAMAVKDLRPGPNGEPPVV LTKSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDSSRFAENKRAVEDKYIGPLVRTSMNRCIHCTRC VRFSTEVAGVPDLGAIGRGEDMEITTYLEHAMRSEMQGNVADLCPVGALTHKPYAFHARPWELAKTESIDVMDAVGSNIR IDTRGREVMRILPRVHEGVNEEWISDKTRYVWDGLKTQRLDRPYVRQNGRLVPASWSQAFDAIAAKVKATPAARLGAIAG DLATTEELFALKQLMGKLGTANVDARQDGAALDPALGRASYVFNPAIVGIEEADAILLVGTDPRHEASVLNARIRKRWRQ GGLKVALIGERVDLTYPYEYLGAGPDTLADLTGGGTFADVLKGAQRPLVIVGQGAIARADGAAILSLAARLAVSVGAVKD GWNGFAVLHTAASRVGALDIGFVPGQGGLTAKAMAEGGVDTLFLLGADEIEVAPGAFVVYIGTHGDKGAHRADVILPGAA YSEKSGLYVNTEGRPQFANRAAFPPGEAREDWAVLRALSEVLGQKLPYDTLFALRAALVSAHPHLGRLDEIEPTDVSVVA KVAGLGGTPDKAPFALAVRDFYLTNPIARSSAVMAECSALRLGGTAVAAE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=707, Percent_Identity=52.3338048090523, Blast_Score=696, Evalue=0.0, Organism=Escherichia coli, GI145693161, Length=387, Percent_Identity=30.4909560723514, Blast_Score=194, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17565758, Length=695, Percent_Identity=50.2158273381295, Blast_Score=640, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566231, Length=592, Percent_Identity=52.1959459459459, Blast_Score=580, Evalue=1e-166, Organism=Caenorhabditis elegans, GI193209088, Length=260, Percent_Identity=60.7692307692308, Blast_Score=323, Evalue=1e-88, Organism=Drosophila melanogaster, GI24640559, Length=695, Percent_Identity=52.0863309352518, Blast_Score=659, Evalue=0.0, Organism=Drosophila melanogaster, GI24640557, Length=695, Percent_Identity=52.0863309352518, Blast_Score=659, Evalue=0.0,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006656 - InterPro: IPR000283 - InterPro: IPR010228 - InterPro: IPR019574 - InterPro: IPR015405 [H]
Pfam domain/function: PF09326 DUF1982; PF00111 Fer2; PF00384 Molybdopterin; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 73645; Mature: 73514
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00642 COMPLEX1_75K_2 ; PS00643 COMPLEX1_75K_3 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIVDGTEVDVPAEYTLLQACEVAGVEIPRFCFHERLSIAGNCRMCLVEVKGGPPKPT CCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCH ASCAMAVKDLRPGPNGEPPVVLTKSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQD HHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QAMAYGVDSSRFAENKRAVEDKYIGPLVRTSMNRCIHCTRCVRFSTEVAGVPDLGAIGRG CHHEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EDMEITTYLEHAMRSEMQGNVADLCPVGALTHKPYAFHARPWELAKTESIDVMDAVGSNI CCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCE RIDTRGREVMRILPRVHEGVNEEWISDKTRYVWDGLKTQRLDRPYVRQNGRLVPASWSQA EEECCHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCHHHHHCCCCHHHCCCEEECCCHHHH FDAIAAKVKATPAARLGAIAGDLATTEELFALKQLMGKLGTANVDARQDGAALDPALGRA HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCC SYVFNPAIVGIEEADAILLVGTDPRHEASVLNARIRKRWRQGGLKVALIGERVDLTYPYE EEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECEEEEECCHH YLGAGPDTLADLTGGGTFADVLKGAQRPLVIVGQGAIARADGAAILSLAARLAVSVGAVK HHCCCCHHHHHCCCCCHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCCC DGWNGFAVLHTAASRVGALDIGFVPGQGGLTAKAMAEGGVDTLFLLGADEIEVAPGAFVV CCCCCEEHEEHHHHHCCEEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCEEECCCEEEE YIGTHGDKGAHRADVILPGAAYSEKSGLYVNTEGRPQFANRAAFPPGEAREDWAVLRALS EEECCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHH EVLGQKLPYDTLFALRAALVSAHPHLGRLDEIEPTDVSVVAKVAGLGGTPDKAPFALAVR HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEE DFYLTNPIARSSAVMAECSALRLGGTAVAAE HHHHCCCHHHHHHHHHHHHHEEECCEEECCC >Mature Secondary Structure SKIIVDGTEVDVPAEYTLLQACEVAGVEIPRFCFHERLSIAGNCRMCLVEVKGGPPKPT CCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCH ASCAMAVKDLRPGPNGEPPVVLTKSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQD HHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QAMAYGVDSSRFAENKRAVEDKYIGPLVRTSMNRCIHCTRCVRFSTEVAGVPDLGAIGRG CHHEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EDMEITTYLEHAMRSEMQGNVADLCPVGALTHKPYAFHARPWELAKTESIDVMDAVGSNI CCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCE RIDTRGREVMRILPRVHEGVNEEWISDKTRYVWDGLKTQRLDRPYVRQNGRLVPASWSQA EEECCHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCHHHHHCCCCHHHCCCEEECCCHHHH FDAIAAKVKATPAARLGAIAGDLATTEELFALKQLMGKLGTANVDARQDGAALDPALGRA HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCC SYVFNPAIVGIEEADAILLVGTDPRHEASVLNARIRKRWRQGGLKVALIGERVDLTYPYE EEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECEEEEECCHH YLGAGPDTLADLTGGGTFADVLKGAQRPLVIVGQGAIARADGAAILSLAARLAVSVGAVK HHCCCCHHHHHCCCCCHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHCCCC DGWNGFAVLHTAASRVGALDIGFVPGQGGLTAKAMAEGGVDTLFLLGADEIEVAPGAFVV CCCCCEEHEEHHHHHCCEEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCEEECCCEEEE YIGTHGDKGAHRADVILPGAAYSEKSGLYVNTEGRPQFANRAAFPPGEAREDWAVLRALS EEECCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHH EVLGQKLPYDTLFALRAALVSAHPHLGRLDEIEPTDVSVVAKVAGLGGTPDKAPFALAVR HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEE DFYLTNPIARSSAVMAECSALRLGGTAVAAE HHHHCCCHHHHHHHHHHHHHEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1605643; 8422400 [H]