| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423286
Identifier: 158423286
GI number: 158423286
Start: 1900512
End: 1901948
Strand: Direct
Name: 158423286
Synonym: AZC_1662
Alternate gene names: NA
Gene position: 1900512-1901948 (Clockwise)
Preceding gene: 158423282
Following gene: 158423287
Centisome position: 35.39
GC content: 70.98
Gene sequence:
>1437_bases ATGACGGCCATCGCGCCGGCGGATCTCGATACCGATGTGTGCGTCGTGGGCGGCACCCTTGCCGGCCTCATGACAGCGCT CACGCTGGCGCGGCAGGGGCTCGACGTCATCCTTCTGGAGCGCAGCCTCATTGCCCCGGCGCCGCAGATCGGCCTTCTCA CCGGCGGCCTGTCGCTGTGGCTGAGCGAGGGCACGCAGCCTCTCTCGCGGGAGAGTGCGCGCTCCGCCTTCGATCTATCG CTGGAAGCCATGGCGGGGGCTCTCTCTTTGTTCGACGAACTGGGGCTCGATCGTCTGGGCCGCGGACTGCTCCGGGTGGG CGCTGCCCATGAGACGGCCCGGCTCGATGCCGAGGCCGAGGCGCGGGACATGCTCGGCCTGCTGGAGCTGCGCCGCTGGC CGCGATCTGAAATCGCCGCCATCACCGGCACCGAACGTTATGTGGGCGCCACCTACGAGCCGCACGCCATCTTCTATGAC GCACGGGACATCAACGGCGCACTGCTGCGGGCGGTGATGGAAGCCGGTGTGCGGGTGTATCAGATGACGCCGGTGCTGGC CGCTGATCTTGATGGTGTGCGCAAATATCTCCAGACGCCGGCGGGACGGGTGCGGGCGGACCATGTGGTGCTGTGCGCCG GACGCCGGGCGGCGCGGATCGCGCCATGGCTCGCGGGTGCGCTCGGTGTCGCGCCTTATGTGCGCGGCGGTTTTGCGGTG CGGGCGGTGCGACCCGATTTTTCCGGGCTCGTTGCCGAACCCGGGCCGCTGGGTGCCCGCTTCGCGCCCGGCATCGGCGA ACTGGATTTTGAAGCGCCCGTGGCCCTGATGCCCGGCGGCGAGGTCGGGGCAGCGGTGGCCCTGCGGCGGCGCGCACGGC AGGTCTATCCGGAACTGCGGCGTCGCATCGCCGAGCATGCCCATGCCTTCAGCCTCGACCGTGCGCCCCACGGACTGCCG CTGATCGGGCTCAGGCGGCAGGGCCTCTGGTATGCGGCAGGGCTCGGGGGAAATGCGCTCGCCAATGCGGCGCTCGCCGC CCATGTGATCTGTGACGGCATCGTCGCGCGGGGCGGAAAGATCGAGGAACTGGCGCCGCTCCAGCCCCGCTACGCCTATG GCCTCGCGGGCCGGGCGGCGGCAGCGGTGCGGTTCGGCTGGCGTCGTCTCTCCGATTCCATCGCCCTTGCCCGCGCGGAG AGGGATCCCGCCCGTGCGGCCAATCACACGCACGCGCGGTTTGAGCCGGGAATCAGCACCGCCCCCGCCCATCCAAGGCG CGTCGATGCCCGCCAGGCCCATGCGGAGCAGGGGGCAGCCGTCCATACCGGTCATGGACCGGCCGGCACAGCCCCCGCAG GGGAGCACCACGCGGGCGAGGTCCCGTCTGCGCCGGAGGGGGCGGACGGTAAAGGAACGCCCTTACGGCAGGCGTGA
Upstream 100 bases:
>100_bases GCCGTAGGGAAACCGCCTTCCGCCGCGCCGTGCGGCAGGGCTGGGCATTGCGCCGGGACCGGCAGCGCGCCGGCTTGATC AGGCTCTGGGGGCAGATGGG
Downstream 100 bases:
>100_bases GGGCGCACGCGCCGGCAGGCGCCGTCACAAAGCGCCGCAAATCCTTGCGACACCGTTGCATTTCTACCACCACGGTCGCC GGGCGAACGGCTAGTGTGCG
Product: glycine/D-amino acid oxidase
Products: NA
Alternate protein names: Glycine/D-Amino Acid Oxidase
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLWLSEGTQPLSRESARSAFDLS LEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAEARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYD ARDINGALLRAVMEAGVRVYQMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELRRRIAEHAHAFSLDRAPHGLP LIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGKIEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAE RDPARAANHTHARFEPGISTAPAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA
Sequences:
>Translated_478_residues MTAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLWLSEGTQPLSRESARSAFDLS LEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAEARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYD ARDINGALLRAVMEAGVRVYQMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELRRRIAEHAHAFSLDRAPHGLP LIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGKIEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAE RDPARAANHTHARFEPGISTAPAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA >Mature_477_residues TAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLWLSEGTQPLSRESARSAFDLSL EAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAEARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYDA RDINGALLRAVMEAGVRVYQMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAVR AVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELRRRIAEHAHAFSLDRAPHGLPL IGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGKIEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAER DPARAANHTHARFEPGISTAPAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50239; Mature: 50108
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLW CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCEEECCCHHHH LSEGTQPLSRESARSAFDLSLEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHCCCCHHHHCCCHHH ARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYDARDINGALLRAVMEAGVRVY HHHHHHHHHHHHCCCHHHEEEECCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEE QMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEE RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELR EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH RRIAEHAHAFSLDRAPHGLPLIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGK HHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC IEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAERDPARAANHTHARFEPGIST CHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEECCCCCC APAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA CCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLW CCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCEEECCCHHHH LSEGTQPLSRESARSAFDLSLEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHCCCCHHHHCCCHHH ARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYDARDINGALLRAVMEAGVRVY HHHHHHHHHHHHCCCHHHEEEECCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEE QMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEE RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELR EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH RRIAEHAHAFSLDRAPHGLPLIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGK HHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC IEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAERDPARAANHTHARFEPGIST CHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEECCCCCC APAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA CCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA