Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158423286

Identifier: 158423286

GI number: 158423286

Start: 1900512

End: 1901948

Strand: Direct

Name: 158423286

Synonym: AZC_1662

Alternate gene names: NA

Gene position: 1900512-1901948 (Clockwise)

Preceding gene: 158423282

Following gene: 158423287

Centisome position: 35.39

GC content: 70.98

Gene sequence:

>1437_bases
ATGACGGCCATCGCGCCGGCGGATCTCGATACCGATGTGTGCGTCGTGGGCGGCACCCTTGCCGGCCTCATGACAGCGCT
CACGCTGGCGCGGCAGGGGCTCGACGTCATCCTTCTGGAGCGCAGCCTCATTGCCCCGGCGCCGCAGATCGGCCTTCTCA
CCGGCGGCCTGTCGCTGTGGCTGAGCGAGGGCACGCAGCCTCTCTCGCGGGAGAGTGCGCGCTCCGCCTTCGATCTATCG
CTGGAAGCCATGGCGGGGGCTCTCTCTTTGTTCGACGAACTGGGGCTCGATCGTCTGGGCCGCGGACTGCTCCGGGTGGG
CGCTGCCCATGAGACGGCCCGGCTCGATGCCGAGGCCGAGGCGCGGGACATGCTCGGCCTGCTGGAGCTGCGCCGCTGGC
CGCGATCTGAAATCGCCGCCATCACCGGCACCGAACGTTATGTGGGCGCCACCTACGAGCCGCACGCCATCTTCTATGAC
GCACGGGACATCAACGGCGCACTGCTGCGGGCGGTGATGGAAGCCGGTGTGCGGGTGTATCAGATGACGCCGGTGCTGGC
CGCTGATCTTGATGGTGTGCGCAAATATCTCCAGACGCCGGCGGGACGGGTGCGGGCGGACCATGTGGTGCTGTGCGCCG
GACGCCGGGCGGCGCGGATCGCGCCATGGCTCGCGGGTGCGCTCGGTGTCGCGCCTTATGTGCGCGGCGGTTTTGCGGTG
CGGGCGGTGCGACCCGATTTTTCCGGGCTCGTTGCCGAACCCGGGCCGCTGGGTGCCCGCTTCGCGCCCGGCATCGGCGA
ACTGGATTTTGAAGCGCCCGTGGCCCTGATGCCCGGCGGCGAGGTCGGGGCAGCGGTGGCCCTGCGGCGGCGCGCACGGC
AGGTCTATCCGGAACTGCGGCGTCGCATCGCCGAGCATGCCCATGCCTTCAGCCTCGACCGTGCGCCCCACGGACTGCCG
CTGATCGGGCTCAGGCGGCAGGGCCTCTGGTATGCGGCAGGGCTCGGGGGAAATGCGCTCGCCAATGCGGCGCTCGCCGC
CCATGTGATCTGTGACGGCATCGTCGCGCGGGGCGGAAAGATCGAGGAACTGGCGCCGCTCCAGCCCCGCTACGCCTATG
GCCTCGCGGGCCGGGCGGCGGCAGCGGTGCGGTTCGGCTGGCGTCGTCTCTCCGATTCCATCGCCCTTGCCCGCGCGGAG
AGGGATCCCGCCCGTGCGGCCAATCACACGCACGCGCGGTTTGAGCCGGGAATCAGCACCGCCCCCGCCCATCCAAGGCG
CGTCGATGCCCGCCAGGCCCATGCGGAGCAGGGGGCAGCCGTCCATACCGGTCATGGACCGGCCGGCACAGCCCCCGCAG
GGGAGCACCACGCGGGCGAGGTCCCGTCTGCGCCGGAGGGGGCGGACGGTAAAGGAACGCCCTTACGGCAGGCGTGA

Upstream 100 bases:

>100_bases
GCCGTAGGGAAACCGCCTTCCGCCGCGCCGTGCGGCAGGGCTGGGCATTGCGCCGGGACCGGCAGCGCGCCGGCTTGATC
AGGCTCTGGGGGCAGATGGG

Downstream 100 bases:

>100_bases
GGGCGCACGCGCCGGCAGGCGCCGTCACAAAGCGCCGCAAATCCTTGCGACACCGTTGCATTTCTACCACCACGGTCGCC
GGGCGAACGGCTAGTGTGCG

Product: glycine/D-amino acid oxidase

Products: NA

Alternate protein names: Glycine/D-Amino Acid Oxidase

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLWLSEGTQPLSRESARSAFDLS
LEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAEARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYD
ARDINGALLRAVMEAGVRVYQMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV
RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELRRRIAEHAHAFSLDRAPHGLP
LIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGKIEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAE
RDPARAANHTHARFEPGISTAPAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA

Sequences:

>Translated_478_residues
MTAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLWLSEGTQPLSRESARSAFDLS
LEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAEARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYD
ARDINGALLRAVMEAGVRVYQMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV
RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELRRRIAEHAHAFSLDRAPHGLP
LIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGKIEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAE
RDPARAANHTHARFEPGISTAPAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA
>Mature_477_residues
TAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLWLSEGTQPLSRESARSAFDLSL
EAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAEARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYDA
RDINGALLRAVMEAGVRVYQMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAVR
AVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELRRRIAEHAHAFSLDRAPHGLPL
IGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGKIEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAER
DPARAANHTHARFEPGISTAPAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50239; Mature: 50108

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLW
CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCEEECCCHHHH
LSEGTQPLSRESARSAFDLSLEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHCCCCHHHHCCCHHH
ARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYDARDINGALLRAVMEAGVRVY
HHHHHHHHHHHHCCCHHHEEEECCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEE
QMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV
EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEE
RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELR
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RRIAEHAHAFSLDRAPHGLPLIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGK
HHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
IEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAERDPARAANHTHARFEPGIST
CHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEECCCCCC
APAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA
CCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAIAPADLDTDVCVVGGTLAGLMTALTLARQGLDVILLERSLIAPAPQIGLLTGGLSLW
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCEEECCCHHHH
LSEGTQPLSRESARSAFDLSLEAMAGALSLFDELGLDRLGRGLLRVGAAHETARLDAEAE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHCCCCHHHHCCCHHH
ARDMLGLLELRRWPRSEIAAITGTERYVGATYEPHAIFYDARDINGALLRAVMEAGVRVY
HHHHHHHHHHHHCCCHHHEEEECCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEE
QMTPVLAADLDGVRKYLQTPAGRVRADHVVLCAGRRAARIAPWLAGALGVAPYVRGGFAV
EECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEE
RAVRPDFSGLVAEPGPLGARFAPGIGELDFEAPVALMPGGEVGAAVALRRRARQVYPELR
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
RRIAEHAHAFSLDRAPHGLPLIGLRRQGLWYAAGLGGNALANAALAAHVICDGIVARGGK
HHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
IEELAPLQPRYAYGLAGRAAAAVRFGWRRLSDSIALARAERDPARAANHTHARFEPGIST
CHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEECCCCCC
APAHPRRVDARQAHAEQGAAVHTGHGPAGTAPAGEHHAGEVPSAPEGADGKGTPLRQA
CCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA