| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423252
Identifier: 158423252
GI number: 158423252
Start: 1859587
End: 1860468
Strand: Reverse
Name: 158423252
Synonym: AZC_1628
Alternate gene names: NA
Gene position: 1860468-1859587 (Counterclockwise)
Preceding gene: 158423254
Following gene: 158423250
Centisome position: 34.65
GC content: 68.37
Gene sequence:
>882_bases ATGACAAACGATATCGCCACCCTCACCAGCCTTCTGAGCCGGATCGCCGACGCGCTGGAGCGCGCGGCCCCGCCCGCCAC TGTCGCCCCGGATTTCGAGGCGGCGGACGCCTTCGTCTGGGCGACACAGCCGTCCCGCTTCGAGCCGGTGCCGCGTGTCA ACCGGGTGGAGATGGATCTGCTCCAGGGCATCGATCGGGTGCGCGACCAGCTGGTGGAGAACACCGAGCGCTTCGCGCGC GGGCTTGCCGCCAACAACGCCCTGCTGTGGGGTGCGCGCGGCATGGGCAAAAGCTCGCTGGTGAAGGCGGCCCATGCGCA TGTGAACCGGTCCATTACCGACCCGGCTGCCCCGCGCCTCAAGCTCGTGGAAATCCACCGCGAGGACATCGAGACCCTGC CGGCGCTGATGGCCCACGCGCGCGCCGCCCGTCACCGCTTCATCGTCTTCTGCGACGATCTCTCCTTCGATGCGGACGAC ACCTCCTACAAGTCGCTGAAGGCGGTGCTGGAGGGCGGCATCGAGGGCCGGCCGGACAATGTGATCTTCTACGCCACCTC CAACCGCCGGCACCTGCTGCCGCGCGACATGATGGAGAATGAGCGCTCCACCGCCATCAATCCCGGCGAGGCGGTGGAAG AGAAGGTCTCGCTCTCGGACCGCTTCGGGCTCTGGCTCGGCTTCCACAAGTGCAGCCAGGACGAATATCTGGCGATGGTC GAAGGCTATGTGGCCCATCACGGCCTCCCGGTCACGGAAGCCGACTGGCGTCCGCAGGCGCTGGAATGGGCCACCACGCG CGGCGCCCGCTCCGGCCGCACGGCGTGGCAGTTCGTGCAGGATCTGGCCGGCCGGCTCGGCGTGCCGCTGAAGGCCGCGT AA
Upstream 100 bases:
>100_bases GCGCCATGCATGGCTTTGGCGCAACAGCCCCGCCCCGCGCCCTTGCCGCCACCGCGCCCCGGCCCTAATCCCGCAGCGGG AGAAAACGAAGCGGCACGAG
Downstream 100 bases:
>100_bases ACGCCATCAGTTCGCTCTGAGACCCCGGCGCCACGCGCCGGGCGTCTGCCCGAAGGCGCGGCGGAACACACGGGTGAGGT GCGCCTGATCGGCAAAGCCG
Product: ATPase
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTNDIATLTSLLSRIADALERAAPPATVAPDFEAADAFVWATQPSRFEPVPRVNRVEMDLLQGIDRVRDQLVENTERFAR GLAANNALLWGARGMGKSSLVKAAHAHVNRSITDPAAPRLKLVEIHREDIETLPALMAHARAARHRFIVFCDDLSFDADD TSYKSLKAVLEGGIEGRPDNVIFYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEYLAMV EGYVAHHGLPVTEADWRPQALEWATTRGARSGRTAWQFVQDLAGRLGVPLKAA
Sequences:
>Translated_293_residues MTNDIATLTSLLSRIADALERAAPPATVAPDFEAADAFVWATQPSRFEPVPRVNRVEMDLLQGIDRVRDQLVENTERFAR GLAANNALLWGARGMGKSSLVKAAHAHVNRSITDPAAPRLKLVEIHREDIETLPALMAHARAARHRFIVFCDDLSFDADD TSYKSLKAVLEGGIEGRPDNVIFYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEYLAMV EGYVAHHGLPVTEADWRPQALEWATTRGARSGRTAWQFVQDLAGRLGVPLKAA >Mature_292_residues TNDIATLTSLLSRIADALERAAPPATVAPDFEAADAFVWATQPSRFEPVPRVNRVEMDLLQGIDRVRDQLVENTERFARG LAANNALLWGARGMGKSSLVKAAHAHVNRSITDPAAPRLKLVEIHREDIETLPALMAHARAARHRFIVFCDDLSFDADDT SYKSLKAVLEGGIEGRPDNVIFYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEYLAMVE GYVAHHGLPVTEADWRPQALEWATTRGARSGRTAWQFVQDLAGRLGVPLKAA
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32490; Mature: 32359
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDIATLTSLLSRIADALERAAPPATVAPDFEAADAFVWATQPSRFEPVPRVNRVEMDL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHH LQGIDRVRDQLVENTERFARGLAANNALLWGARGMGKSSLVKAAHAHVNRSITDPAAPRL HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCE KLVEIHREDIETLPALMAHARAARHRFIVFCDDLSFDADDTSYKSLKAVLEGGIEGRPDN EEHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC VIFYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEYLAMV EEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EGYVAHHGLPVTEADWRPQALEWATTRGARSGRTAWQFVQDLAGRLGVPLKAA HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TNDIATLTSLLSRIADALERAAPPATVAPDFEAADAFVWATQPSRFEPVPRVNRVEMDL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHH LQGIDRVRDQLVENTERFARGLAANNALLWGARGMGKSSLVKAAHAHVNRSITDPAAPRL HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCE KLVEIHREDIETLPALMAHARAARHRFIVFCDDLSFDADDTSYKSLKAVLEGGIEGRPDN EEHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC VIFYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEYLAMV EEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EGYVAHHGLPVTEADWRPQALEWATTRGARSGRTAWQFVQDLAGRLGVPLKAA HHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA