Click here to switch to the map view.

The map label for this gene is yfdH [C]

Identifier: 158423096

GI number: 158423096

Start: 1671292

End: 1672317

Strand: Direct

Name: yfdH [C]

Synonym: AZC_1472

Alternate gene names: 158423096

Gene position: 1671292-1672317 (Clockwise)

Preceding gene: 158423094

Following gene: 158423097

Centisome position: 31.12

GC content: 67.54

Gene sequence:

>1026_bases
TTGAGGCCTCCCCCGGTAATACGCATGACCCCTGACCTCAGCATCGTCGTTCCCTGCTACAACGAGGCCACCGGCCTGCC
GTTCTTCCACGAGCGCCTCAGCGCCCATGCGCGGAAGGTGGCGGAAGCGCGCGGCATGCGTATCGAGATCGTCTATGTGG
ACGACGGCAGCCGCGACCAGACCGCCGCCGTGGCGCTCGCCCTGAAGCCTCAGGGCACGGACGTGCAGGTGGTGGCGCTG
TCGCGCAACTTCGGCAAGGAAGCCGCGCTGATGGCGGGGCTCGACCACGCCCGCGGCGATGCGCTGCTGTTCATGGACGG
CGACGGCCAGCATCCGCCGGAGATGATCGAGACCTTCGTCGGCCTCTGGAAGGACGAGGGCTATGACGTCGCCTATGCCA
TCAAGGCTGATCGCATGGACGAGCCGGCCGCCCGCCGCACCTTCGTGAAGATCTTCTACTGGCTGCTCAACTTCGGCGCG
CAAAGCCGCATTCCCGAGGACGCCGCCGACTTCCGCCTGCTCTCGCCCCGCGCCGCTGCCGCTTTGCGGCGCCTGCCGGA
GCGCAACCGCTTCTTCAAGGGCCTGTCGAGCTGGATCGGCTTCCGCCAGAAGGCAGTGCCCTACCGGCCGGCGGCGCGCG
AGCATGGCACCTCGTCCTGGAGCTTCCTGCGCCTCCTCGGCCTTTCCATGGAGGGCCTCACCTCCTTCTCGCCCGCGCCG
CTGCGCCTCGCGGGCATGGTCGGCGCGGCGCTCGCCGCCGCCGCCTTCCTCTATGGCTCCTGGATCGTCATAGAGCGCCT
GGTCTGGGGCATTCCCCTGCCGGGCTATCCCTCGCTCGTCGTCGGATTGATGGTCATCGGCGGCGTGCAGCTGCTGGTGA
TCGGCATCATGGGCGAATACATCGCTCGCATTCTGTCCGAAATCAAAGCGCGTCCGGTCTATTTCGTCGCTGATCATGCG
GTCCGCCATGCGGAAGCCGCCGGCGACCGTCCGGTCGGCTTGGAGTTGCCCAAGGCTTTGCCGTGA

Upstream 100 bases:

>100_bases
TCCAGAACGCCCCGGCACGGGTCCGGTTCCCCAGCGCGGTGAAAAATTTTCGCGGGGATCACGCCTGCGGATAAACACAT
TTAAGCCTTCCCATGGCAGC

Downstream 100 bases:

>100_bases
AGCGTATTGTCATCTGCGCGGACGACTACGGGATCGCTCCCGGCGTCTCCGCTGCCATCCGTGCCCTGTTGGCGGAGCGG
CGCATCAACGCCACCTCGGT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRPPPVIRMTPDLSIVVPCYNEATGLPFFHERLSAHARKVAEARGMRIEIVYVDDGSRDQTAAVALALKPQGTDVQVVAL
SRNFGKEAALMAGLDHARGDALLFMDGDGQHPPEMIETFVGLWKDEGYDVAYAIKADRMDEPAARRTFVKIFYWLLNFGA
QSRIPEDAADFRLLSPRAAAALRRLPERNRFFKGLSSWIGFRQKAVPYRPAAREHGTSSWSFLRLLGLSMEGLTSFSPAP
LRLAGMVGAALAAAAFLYGSWIVIERLVWGIPLPGYPSLVVGLMVIGGVQLLVIGIMGEYIARILSEIKARPVYFVADHA
VRHAEAAGDRPVGLELPKALP

Sequences:

>Translated_341_residues
MRPPPVIRMTPDLSIVVPCYNEATGLPFFHERLSAHARKVAEARGMRIEIVYVDDGSRDQTAAVALALKPQGTDVQVVAL
SRNFGKEAALMAGLDHARGDALLFMDGDGQHPPEMIETFVGLWKDEGYDVAYAIKADRMDEPAARRTFVKIFYWLLNFGA
QSRIPEDAADFRLLSPRAAAALRRLPERNRFFKGLSSWIGFRQKAVPYRPAAREHGTSSWSFLRLLGLSMEGLTSFSPAP
LRLAGMVGAALAAAAFLYGSWIVIERLVWGIPLPGYPSLVVGLMVIGGVQLLVIGIMGEYIARILSEIKARPVYFVADHA
VRHAEAAGDRPVGLELPKALP
>Mature_341_residues
MRPPPVIRMTPDLSIVVPCYNEATGLPFFHERLSAHARKVAEARGMRIEIVYVDDGSRDQTAAVALALKPQGTDVQVVAL
SRNFGKEAALMAGLDHARGDALLFMDGDGQHPPEMIETFVGLWKDEGYDVAYAIKADRMDEPAARRTFVKIFYWLLNFGA
QSRIPEDAADFRLLSPRAAAALRRLPERNRFFKGLSSWIGFRQKAVPYRPAAREHGTSSWSFLRLLGLSMEGLTSFSPAP
LRLAGMVGAALAAAAFLYGSWIVIERLVWGIPLPGYPSLVVGLMVIGGVQLLVIGIMGEYIARILSEIKARPVYFVADHA
VRHAEAAGDRPVGLELPKALP

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI7019323, Length=185, Percent_Identity=31.3513513513514, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1788692, Length=304, Percent_Identity=38.4868421052632, Blast_Score=233, Evalue=9e-63,
Organism=Escherichia coli, GI1788588, Length=307, Percent_Identity=32.2475570032573, Blast_Score=161, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6325441, Length=122, Percent_Identity=28.6885245901639, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24582769, Length=186, Percent_Identity=32.7956989247312, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37419; Mature: 37419

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPPVIRMTPDLSIVVPCYNEATGLPFFHERLSAHARKVAEARGMRIEIVYVDDGSRDQ
CCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
TAAVALALKPQGTDVQVVALSRNFGKEAALMAGLDHARGDALLFMDGDGQHPPEMIETFV
EEEEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH
GLWKDEGYDVAYAIKADRMDEPAARRTFVKIFYWLLNFGAQSRIPEDAADFRLLSPRAAA
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEECHHHHH
ALRRLPERNRFFKGLSSWIGFRQKAVPYRPAAREHGTSSWSFLRLLGLSMEGLTSFSPAP
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCHHCCCCCCCCC
LRLAGMVGAALAAAAFLYGSWIVIERLVWGIPLPGYPSLVVGLMVIGGVQLLVIGIMGEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IARILSEIKARPVYFVADHAVRHAEAAGDRPVGLELPKALP
HHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPPPVIRMTPDLSIVVPCYNEATGLPFFHERLSAHARKVAEARGMRIEIVYVDDGSRDQ
CCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
TAAVALALKPQGTDVQVVALSRNFGKEAALMAGLDHARGDALLFMDGDGQHPPEMIETFV
EEEEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHH
GLWKDEGYDVAYAIKADRMDEPAARRTFVKIFYWLLNFGAQSRIPEDAADFRLLSPRAAA
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEECHHHHH
ALRRLPERNRFFKGLSSWIGFRQKAVPYRPAAREHGTSSWSFLRLLGLSMEGLTSFSPAP
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCHHCCCCCCCCC
LRLAGMVGAALAAAAFLYGSWIVIERLVWGIPLPGYPSLVVGLMVIGGVQLLVIGIMGEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IARILSEIKARPVYFVADHAVRHAEAAGDRPVGLELPKALP
HHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]