| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is narK [H]
Identifier: 158423048
GI number: 158423048
Start: 1620626
End: 1623376
Strand: Direct
Name: narK [H]
Synonym: AZC_1424
Alternate gene names: 158423048
Gene position: 1620626-1623376 (Clockwise)
Preceding gene: 158423046
Following gene: 158423049
Centisome position: 30.18
GC content: 66.92
Gene sequence:
>2751_bases ATGCCAGCGATCCACGATGTCGACCGGGGCGAGCAGCGCAGGGCGCTCGCCATGAGCACGGTGTCCTTCACCGTGTGCTT TGCGGTCTGGACCATCTTTTCCATCATCGGCATCTCCATCCGCAAGGAGCTGGGTCTCAGCGAAACCCAGTTCGGCCTGC TGGTGGGAACGCCCATCCTCACCGGCTCGCTCATCCGGGTGGTGCTCGGCATCTGGACCGATCGTTATGGCGGCCGCCTG GTCTTTACCGCCACCATGCTGGCGGCGGCCGCCGCGACCTTCCTCCTCTCCCACGCCACCACCTATCCGCAGATGCTGGC GGCGGCGCTCGGCGTCGGCATTGCTGGCGGCTCGTTCGCGGTGGGCGTCGCCTATGTGTCGCGCTGGTATCCGGCGGGCA AGCAGGGCACCGCGCTGGGCATCTTCGGGGCCGGCAACGTGGGCTCGGCCGTCACCAAGTTCCTCGCGCCCTTCGTGCTG GTCGCCTTCGGCTGGCAGATGGTGGCGCAGGTCTGGGCCGCCGCCCTTGTGGTGATGGCGGCCATCTTCTGGTTCACCAC CAACGACGACCCCGTTCAGGCGGAACGCCGCCGCACCGGCCTGCGCCCCAAGAGCGCCTGGCTTGAGCTGGAGCCGCTGA AGAACGTGCAGGTCTGGCGCTTCGCCATCTATTATTTCTTCGTCTTCGGCGCCTTCGTGGCCCTCGCGCTCTGGCTGCCG CAATATCTCATCAACGTCTACGGCCTCGACATCAAGACGGCCGGCATGATCGCCGCCTTCTTCTCGGTGCCGGCGAGCCT GTTCCGCGCCTATGGCGGGCATCTGTCGGACGTCTATGGCGCGCGGCGCGTCCTCTACTGGACGTTCCTCGTCGGCATCG CCGCCACCTTCGTCCTGTCCTATCCGCCCACCGATTATGTGGTCCACGGCACTAACGGCCCGATCGCCTTCCATATGGAA ATGGGGCTGGTGGGCTTCACGGTGAGCGTGTTCGTGCTCGGCTTCTTCATGGCTCTGGGCAAGGCTGCGGTCTACAAGCA CATCCCCGTCTATTATCCGGACCATGTGGGCTCCGTCGGCGGCCTTGTCGGCATGATCGGCGGTCTCGGCGGCTTCGTGC TGCCCATCCTGTTCGGCGTGCTCCTCGACCTCACCGGCCTCTGGACCAGCTGCTTCATGGCCCTGTTCCTGCTGGTCTCC GGTGCGCTGGTGTGGATGCACCTCGCCGTCCGCCAGATGGAGCGCGAGGCGGGGGGCGAGACCCTCGCCCGCCTGCCGCA ACTGCCCGAGATGCAGGGCCTGCCAGAGCCGAAGGTGACGGCGGTTCCGCCCAAGGCGTCCGGTGCCGTGCTCACCGACT GGCGGCCGGAGGATCCGGAGTTCTGGGCCAAGACCGGCCGCGCCATTGCCCGCCGCAACCTCTGGCTCTCCATCCCCGCG CTGCTGCTCTCCTTTGCCATCTGGCAGGTGTGGTCGGTGGTGGTGGCGAAGCTCCCGCTGGTCGGCTTCACCTACAGCAC GGACCAATTGTTCTGGCTCGCCGCGCTGCCCGGCATCTCGGGCGCCACGCTGCGCATCTTCTACTCCTTCATGGTGCCCA TCTTCGGCGGGCGGCTCTGGACGACGCTCACCACCTGGTCGCTGATCATCCCCGCGCTCGGCATCGGCTATGCGGTGCAG AACCCGGATACGCCCTATGTGGTGCTGCTCATCCTCGCGCTGCTCTGCGGCTTCGGCGGCGGCAACTTCTCCTCCTCCAT GGCCAACATCTCCTTCTTCTTCCCGAAGGCGGAGAAGGGCAATGCGCTGGCGCTCAATGCGGGCCTCGGCAATCTCGGGG TGAGCGTGGTGCAGTTCGTGGTGCCGCTCGTCATCACCGCCGGCGTGTTCGGCTGGCTGGGCGGCGATCCGGCCATGGTG AAGGGGCAGGCGGCGCCGCTGTGGCTCCAGAATGCGGGCTTCGTCTTCGTGCCCTTCATCGTGCTCTCCGCCTTCGCCTC CTGGTTCGGCATGAATGACATTGCCGATGCCAAGGCCTCCTTCGCCGAGCAGGCGGTGATCTTCCGCCGCGCGCACAACT GGATCATGTGCTGGCTCTACACCGGCACCTTCGGATCCTTCATCGGCTATTCGGCGGGCTTCCCGCTGCTGGCGAAGGCC CTGTTCCCGGATGTGAATGCGCTTCAGTTCGCCTTCCTCGGCCCGCTGGTCGGCGCACTCTCGCGCTCCGGCACCGGCTG GCTTGCGGACAAGTATGGCGGCGCCCGCGTCACCATGGGGGCCTTCGTGCTGATGATGATCGGCGTGTCGGGCGTGCTGT GGTTCATCGGCATCCGCGACCAGTCCGGCGCCTTCTGGGGCTTCTTCGCCTCCTTCCTGCTGCTGTTCTTCGCCACCGGC GTCGGCAACGCCTCCACCTTCCAGATGATCCCCGCAATCATGACCAAGGAGATGGCCCGCCTGATGCCGAAGGCTGACGC GGAGGCCCGCCGCAAGCAGGCGGAGAAGGAAAGCGCCGCCATCACCGGCTTCACCGCCGCCATCGCCGCCTTCGGGGCCT TCTTCATCCCCAAGGGCTACGGCACCTCCATCGCGCTCACCGGCGGCCCGGAGGCCGCGCTCTGGGGCTTCCTCATCTTC TACGTGAGCTGCCTCGTCCTCACCTGGGCCGTCTACACCCGCAAGGGCGGCCTGCTCCACGACGTCGAGCGCGCCAAGCG CGCCTCCATCCGCCCGGCCGCGGCCGAATAA
Upstream 100 bases:
>100_bases CTTCTATTGAAGAGTTCTGATTCAAATCAAGGAGAGCTTTGGTCGTCGGCGGAATTTTGCCCCTGCGCAGAACGGATGCG CGGACGGCGCGAGAGCAAAA
Downstream 100 bases:
>100_bases TCAAGGGCGACATCCATGTCCCACTTTCTCGATCGCCTCACCTTCTTCAACAAGACCGTGGACGACTTCTCCGACGGCTA CGGCATCGTCACCAACGAGG
Product: nitrite extrusion protein
Products: NA
Alternate protein names: Nitrite facilitator 1 [H]
Number of amino acids: Translated: 916; Mature: 915
Protein sequence:
>916_residues MPAIHDVDRGEQRRALAMSTVSFTVCFAVWTIFSIIGISIRKELGLSETQFGLLVGTPILTGSLIRVVLGIWTDRYGGRL VFTATMLAAAAATFLLSHATTYPQMLAAALGVGIAGGSFAVGVAYVSRWYPAGKQGTALGIFGAGNVGSAVTKFLAPFVL VAFGWQMVAQVWAAALVVMAAIFWFTTNDDPVQAERRRTGLRPKSAWLELEPLKNVQVWRFAIYYFFVFGAFVALALWLP QYLINVYGLDIKTAGMIAAFFSVPASLFRAYGGHLSDVYGARRVLYWTFLVGIAATFVLSYPPTDYVVHGTNGPIAFHME MGLVGFTVSVFVLGFFMALGKAAVYKHIPVYYPDHVGSVGGLVGMIGGLGGFVLPILFGVLLDLTGLWTSCFMALFLLVS GALVWMHLAVRQMEREAGGETLARLPQLPEMQGLPEPKVTAVPPKASGAVLTDWRPEDPEFWAKTGRAIARRNLWLSIPA LLLSFAIWQVWSVVVAKLPLVGFTYSTDQLFWLAALPGISGATLRIFYSFMVPIFGGRLWTTLTTWSLIIPALGIGYAVQ NPDTPYVVLLILALLCGFGGGNFSSSMANISFFFPKAEKGNALALNAGLGNLGVSVVQFVVPLVITAGVFGWLGGDPAMV KGQAAPLWLQNAGFVFVPFIVLSAFASWFGMNDIADAKASFAEQAVIFRRAHNWIMCWLYTGTFGSFIGYSAGFPLLAKA LFPDVNALQFAFLGPLVGALSRSGTGWLADKYGGARVTMGAFVLMMIGVSGVLWFIGIRDQSGAFWGFFASFLLLFFATG VGNASTFQMIPAIMTKEMARLMPKADAEARRKQAEKESAAITGFTAAIAAFGAFFIPKGYGTSIALTGGPEAALWGFLIF YVSCLVLTWAVYTRKGGLLHDVERAKRASIRPAAAE
Sequences:
>Translated_916_residues MPAIHDVDRGEQRRALAMSTVSFTVCFAVWTIFSIIGISIRKELGLSETQFGLLVGTPILTGSLIRVVLGIWTDRYGGRL VFTATMLAAAAATFLLSHATTYPQMLAAALGVGIAGGSFAVGVAYVSRWYPAGKQGTALGIFGAGNVGSAVTKFLAPFVL VAFGWQMVAQVWAAALVVMAAIFWFTTNDDPVQAERRRTGLRPKSAWLELEPLKNVQVWRFAIYYFFVFGAFVALALWLP QYLINVYGLDIKTAGMIAAFFSVPASLFRAYGGHLSDVYGARRVLYWTFLVGIAATFVLSYPPTDYVVHGTNGPIAFHME MGLVGFTVSVFVLGFFMALGKAAVYKHIPVYYPDHVGSVGGLVGMIGGLGGFVLPILFGVLLDLTGLWTSCFMALFLLVS GALVWMHLAVRQMEREAGGETLARLPQLPEMQGLPEPKVTAVPPKASGAVLTDWRPEDPEFWAKTGRAIARRNLWLSIPA LLLSFAIWQVWSVVVAKLPLVGFTYSTDQLFWLAALPGISGATLRIFYSFMVPIFGGRLWTTLTTWSLIIPALGIGYAVQ NPDTPYVVLLILALLCGFGGGNFSSSMANISFFFPKAEKGNALALNAGLGNLGVSVVQFVVPLVITAGVFGWLGGDPAMV KGQAAPLWLQNAGFVFVPFIVLSAFASWFGMNDIADAKASFAEQAVIFRRAHNWIMCWLYTGTFGSFIGYSAGFPLLAKA LFPDVNALQFAFLGPLVGALSRSGTGWLADKYGGARVTMGAFVLMMIGVSGVLWFIGIRDQSGAFWGFFASFLLLFFATG VGNASTFQMIPAIMTKEMARLMPKADAEARRKQAEKESAAITGFTAAIAAFGAFFIPKGYGTSIALTGGPEAALWGFLIF YVSCLVLTWAVYTRKGGLLHDVERAKRASIRPAAAE >Mature_915_residues PAIHDVDRGEQRRALAMSTVSFTVCFAVWTIFSIIGISIRKELGLSETQFGLLVGTPILTGSLIRVVLGIWTDRYGGRLV FTATMLAAAAATFLLSHATTYPQMLAAALGVGIAGGSFAVGVAYVSRWYPAGKQGTALGIFGAGNVGSAVTKFLAPFVLV AFGWQMVAQVWAAALVVMAAIFWFTTNDDPVQAERRRTGLRPKSAWLELEPLKNVQVWRFAIYYFFVFGAFVALALWLPQ YLINVYGLDIKTAGMIAAFFSVPASLFRAYGGHLSDVYGARRVLYWTFLVGIAATFVLSYPPTDYVVHGTNGPIAFHMEM GLVGFTVSVFVLGFFMALGKAAVYKHIPVYYPDHVGSVGGLVGMIGGLGGFVLPILFGVLLDLTGLWTSCFMALFLLVSG ALVWMHLAVRQMEREAGGETLARLPQLPEMQGLPEPKVTAVPPKASGAVLTDWRPEDPEFWAKTGRAIARRNLWLSIPAL LLSFAIWQVWSVVVAKLPLVGFTYSTDQLFWLAALPGISGATLRIFYSFMVPIFGGRLWTTLTTWSLIIPALGIGYAVQN PDTPYVVLLILALLCGFGGGNFSSSMANISFFFPKAEKGNALALNAGLGNLGVSVVQFVVPLVITAGVFGWLGGDPAMVK GQAAPLWLQNAGFVFVPFIVLSAFASWFGMNDIADAKASFAEQAVIFRRAHNWIMCWLYTGTFGSFIGYSAGFPLLAKAL FPDVNALQFAFLGPLVGALSRSGTGWLADKYGGARVTMGAFVLMMIGVSGVLWFIGIRDQSGAFWGFFASFLLLFFATGV GNASTFQMIPAIMTKEMARLMPKADAEARRKQAEKESAAITGFTAAIAAFGAFFIPKGYGTSIALTGGPEAALWGFLIFY VSCLVLTWAVYTRKGGLLHDVERAKRASIRPAAAE
Specific function: Involved in excretion of nitrite produced by the dissimilatory reduction of nitrate [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=459, Percent_Identity=53.5947712418301, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1787743, Length=453, Percent_Identity=50.551876379691, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1786686, Length=273, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 98739; Mature: 98608
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIHDVDRGEQRRALAMSTVSFTVCFAVWTIFSIIGISIRKELGLSETQFGLLVGTPIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHH TGSLIRVVLGIWTDRYGGRLVFTATMLAAAAATFLLSHATTYPQMLAAALGVGIAGGSFA HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHH VGVAYVSRWYPAGKQGTALGIFGAGNVGSAVTKFLAPFVLVAFGWQMVAQVWAAALVVMA HHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIFWFTTNDDPVQAERRRTGLRPKSAWLELEPLKNVQVWRFAIYYFFVFGAFVALALWLP HHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QYLINVYGLDIKTAGMIAAFFSVPASLFRAYGGHLSDVYGARRVLYWTFLVGIAATFVLS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC YPPTDYVVHGTNGPIAFHMEMGLVGFTVSVFVLGFFMALGKAAVYKHIPVYYPDHVGSVG CCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH GLVGMIGGLGGFVLPILFGVLLDLTGLWTSCFMALFLLVSGALVWMHLAVRQMEREAGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TLARLPQLPEMQGLPEPKVTAVPPKASGAVLTDWRPEDPEFWAKTGRAIARRNLWLSIPA HHHHCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH LLLSFAIWQVWSVVVAKLPLVGFTYSTDQLFWLAALPGISGATLRIFYSFMVPIFGGRLW HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHH TTLTTWSLIIPALGIGYAVQNPDTPYVVLLILALLCGFGGGNFSSSMANISFFFPKAEKG HHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC NALALNAGLGNLGVSVVQFVVPLVITAGVFGWLGGDPAMVKGQAAPLWLQNAGFVFVPFI CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCHHHHHHH VLSAFASWFGMNDIADAKASFAEQAVIFRRAHNWIMCWLYTGTFGSFIGYSAGFPLLAKA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCHHHHHHH LFPDVNALQFAFLGPLVGALSRSGTGWLADKYGGARVTMGAFVLMMIGVSGVLWFIGIRD HCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEC QSGAFWGFFASFLLLFFATGVGNASTFQMIPAIMTKEMARLMPKADAEARRKQAEKESAA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ITGFTAAIAAFGAFFIPKGYGTSIALTGGPEAALWGFLIFYVSCLVLTWAVYTRKGGLLH HHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DVERAKRASIRPAAAE HHHHHHHCCCCCCCCC >Mature Secondary Structure PAIHDVDRGEQRRALAMSTVSFTVCFAVWTIFSIIGISIRKELGLSETQFGLLVGTPIL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHH TGSLIRVVLGIWTDRYGGRLVFTATMLAAAAATFLLSHATTYPQMLAAALGVGIAGGSFA HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHH VGVAYVSRWYPAGKQGTALGIFGAGNVGSAVTKFLAPFVLVAFGWQMVAQVWAAALVVMA HHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIFWFTTNDDPVQAERRRTGLRPKSAWLELEPLKNVQVWRFAIYYFFVFGAFVALALWLP HHHHHCCCCCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QYLINVYGLDIKTAGMIAAFFSVPASLFRAYGGHLSDVYGARRVLYWTFLVGIAATFVLS HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC YPPTDYVVHGTNGPIAFHMEMGLVGFTVSVFVLGFFMALGKAAVYKHIPVYYPDHVGSVG CCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH GLVGMIGGLGGFVLPILFGVLLDLTGLWTSCFMALFLLVSGALVWMHLAVRQMEREAGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH TLARLPQLPEMQGLPEPKVTAVPPKASGAVLTDWRPEDPEFWAKTGRAIARRNLWLSIPA HHHHCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH LLLSFAIWQVWSVVVAKLPLVGFTYSTDQLFWLAALPGISGATLRIFYSFMVPIFGGRLW HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHH TTLTTWSLIIPALGIGYAVQNPDTPYVVLLILALLCGFGGGNFSSSMANISFFFPKAEKG HHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC NALALNAGLGNLGVSVVQFVVPLVITAGVFGWLGGDPAMVKGQAAPLWLQNAGFVFVPFI CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCHHHHHHH VLSAFASWFGMNDIADAKASFAEQAVIFRRAHNWIMCWLYTGTFGSFIGYSAGFPLLAKA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCHHHHHHH LFPDVNALQFAFLGPLVGALSRSGTGWLADKYGGARVTMGAFVLMMIGVSGVLWFIGIRD HCCCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEEC QSGAFWGFFASFLLLFFATGVGNASTFQMIPAIMTKEMARLMPKADAEARRKQAEKESAA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ITGFTAAIAAFGAFFIPKGYGTSIALTGGPEAALWGFLIFYVSCLVLTWAVYTRKGGLLH HHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH DVERAKRASIRPAAAE HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2668029; 8905232; 9278503; 2657652 [H]