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The map label for this gene is ydiU [C]

Identifier: 158423019

GI number: 158423019

Start: 1579018

End: 1580526

Strand: Direct

Name: ydiU [C]

Synonym: AZC_1395

Alternate gene names: 158423019

Gene position: 1579018-1580526 (Clockwise)

Preceding gene: 158423014

Following gene: 158423027

Centisome position: 29.41

GC content: 67.59

Gene sequence:

>1509_bases
ATGCCCATCTTGCGGACAATCCCATTCGCCCGGCAGGTCCCCATGACCATTGCGTTCGAGAACACGTTCCGCTCGCTTCC
CGACACCCTCTTCGCGCCGGTCGTGCCGAGCGCGGTACGGCAGCCCGAGCTTATCCGCCTCAATGACGAATTGGCCGGCG
AGCTGAAGCTCGATGCCGGCTGGCTGCGCAGTCCCGAGGGGCTGGCGGCGCTCTCCGGAAATGCCGTTCCCTCCGCGTCC
GATCCCATCGCGCTGGCCTATGCCGGACATCAGTTCGGCCATTTCGTTCCGCAGCTTGGAGACGGGCGGGCCATCCTTCT
CGGCGAGGTGGTGGACCGCAATGGCGTGCGGCGGGACATCCAGCTGAAGGGCGCGGGCCGCACTCCCTATTCGCGGCGGG
GGGACGGGCGCGCGGCTCTCGGGCCGGTCCTGCGGGAATATATCGTCAGCGAAGCGATGGCGGCCCTTGGCGTGCCGACG
ACGCGGGCCCTGGCGGCGGTCGCGACGGGCGAGCGCGTGCAGCGGGAGATCGGCCTTCCGGGCGCCGTCCTCACCCGCGT
CGCGGCGAGCCATATCCGTGTCGGGACCTTCCAATTCGTCGCCGCCAGGCGCGACGAAACCGCGCTGCGCAGCCTCGCGG
ACTATGTGATCGGGCGGCACTATCCCGAGGCGGCGGAGGCGGACAATCCGTATCTGGCGCTGCTGAACCTCGTTATCCGC
GCGCAGGCGCGCCTCGTCGCCCATTGGGTTTCGCTCGGCTTCATCCATGGAGTGATGAATACGGACAACATGGCCGTCTC
GGGCGAGACCATCGACTATGGCCCGTGCGCCTTCCTCGATGCCTATGATCCGAACAAGGTGTTCAGCTCCATCGACGAGT
TCGGCCGCTATGCGTTCGGCAACCAGTCGCGCGTCGCCATGTGGAATCTCGCCCGACTGGCGGAGGCTCTGCTGCCCCTC
ATCGATACCAGTCCCGATCGGGCGGTGGCACAGGCCGAAGAGGCGCTGATGACGTTCATGCCCCACTTCGATGCGGCCCG
CCTGTTCCACATGCGGGCGAAGCTGGGTCTTTCGACGGAGACCCCTGAAGATGCGGGCCTGATCGAGGATCTGCTTTCGG
CCATGCACGAAATGCAGGCCGATTTCACCCTCACGTTCCGGGCGCTCTCAAGCCTGCCGGTGGACGGTGCGCCAGTTGCG
CTCATCGGGGCGTTTGCGGAGGGGCCCCTGCGCGACTGGAGCGCGCGTTATGCCGCCCGCGTGACGCTTGACCCGCGTCC
GGCGGAGGTGCGGCGGCAGGCGATGGAAGCGGCCAATCCGCGCTTCATTCCGCGCAACCACCGCATCGAAGAGGTCATCC
GCGCCGCCGTCAGCGACGGCGACTATGTGCCGTTCCATGACATGGTCGCCGTCCTTGCCGCGCCCTATGCGGAGCAGCCG
GACAAGGCGGCGTATGCGGAACCGCCCGCGCCGGGCGAAGAGGTGCTGCGGACCTTCTGCGGCACGTGA

Upstream 100 bases:

>100_bases
TGCGGGTCCCTTCCGCACGCGCGCCGCGGCCGACCAGCACCTCGACGACCTCTGGCACCTGCCGCGCACGGGCTGATCCG
GGTTGTCCTGAAGGGCCGGG

Downstream 100 bases:

>100_bases
GGGGCCGCCGCCCCCTGGGCGGCTTCCCTCAACAGGCGTCTGTCGCGTTCACTCGCTCCGGAAGCTCAGCCACTGGCTGG
GGGGCAGATTGGCGGGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MPILRTIPFARQVPMTIAFENTFRSLPDTLFAPVVPSAVRQPELIRLNDELAGELKLDAGWLRSPEGLAALSGNAVPSAS
DPIALAYAGHQFGHFVPQLGDGRAILLGEVVDRNGVRRDIQLKGAGRTPYSRRGDGRAALGPVLREYIVSEAMAALGVPT
TRALAAVATGERVQREIGLPGAVLTRVAASHIRVGTFQFVAARRDETALRSLADYVIGRHYPEAAEADNPYLALLNLVIR
AQARLVAHWVSLGFIHGVMNTDNMAVSGETIDYGPCAFLDAYDPNKVFSSIDEFGRYAFGNQSRVAMWNLARLAEALLPL
IDTSPDRAVAQAEEALMTFMPHFDAARLFHMRAKLGLSTETPEDAGLIEDLLSAMHEMQADFTLTFRALSSLPVDGAPVA
LIGAFAEGPLRDWSARYAARVTLDPRPAEVRRQAMEAANPRFIPRNHRIEEVIRAAVSDGDYVPFHDMVAVLAAPYAEQP
DKAAYAEPPAPGEEVLRTFCGT

Sequences:

>Translated_502_residues
MPILRTIPFARQVPMTIAFENTFRSLPDTLFAPVVPSAVRQPELIRLNDELAGELKLDAGWLRSPEGLAALSGNAVPSAS
DPIALAYAGHQFGHFVPQLGDGRAILLGEVVDRNGVRRDIQLKGAGRTPYSRRGDGRAALGPVLREYIVSEAMAALGVPT
TRALAAVATGERVQREIGLPGAVLTRVAASHIRVGTFQFVAARRDETALRSLADYVIGRHYPEAAEADNPYLALLNLVIR
AQARLVAHWVSLGFIHGVMNTDNMAVSGETIDYGPCAFLDAYDPNKVFSSIDEFGRYAFGNQSRVAMWNLARLAEALLPL
IDTSPDRAVAQAEEALMTFMPHFDAARLFHMRAKLGLSTETPEDAGLIEDLLSAMHEMQADFTLTFRALSSLPVDGAPVA
LIGAFAEGPLRDWSARYAARVTLDPRPAEVRRQAMEAANPRFIPRNHRIEEVIRAAVSDGDYVPFHDMVAVLAAPYAEQP
DKAAYAEPPAPGEEVLRTFCGT
>Mature_501_residues
PILRTIPFARQVPMTIAFENTFRSLPDTLFAPVVPSAVRQPELIRLNDELAGELKLDAGWLRSPEGLAALSGNAVPSASD
PIALAYAGHQFGHFVPQLGDGRAILLGEVVDRNGVRRDIQLKGAGRTPYSRRGDGRAALGPVLREYIVSEAMAALGVPTT
RALAAVATGERVQREIGLPGAVLTRVAASHIRVGTFQFVAARRDETALRSLADYVIGRHYPEAAEADNPYLALLNLVIRA
QARLVAHWVSLGFIHGVMNTDNMAVSGETIDYGPCAFLDAYDPNKVFSSIDEFGRYAFGNQSRVAMWNLARLAEALLPLI
DTSPDRAVAQAEEALMTFMPHFDAARLFHMRAKLGLSTETPEDAGLIEDLLSAMHEMQADFTLTFRALSSLPVDGAPVAL
IGAFAEGPLRDWSARYAARVTLDPRPAEVRRQAMEAANPRFIPRNHRIEEVIRAAVSDGDYVPFHDMVAVLAAPYAEQPD
KAAYAEPPAPGEEVLRTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=418, Percent_Identity=42.822966507177, Blast_Score=275, Evalue=1e-73,
Organism=Escherichia coli, GI1787999, Length=490, Percent_Identity=39.5918367346939, Blast_Score=326, Evalue=2e-90,
Organism=Saccharomyces cerevisiae, GI6325034, Length=297, Percent_Identity=36.026936026936, Blast_Score=180, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54538; Mature: 54407

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILRTIPFARQVPMTIAFENTFRSLPDTLFAPVVPSAVRQPELIRLNDELAGELKLDAG
CCCCCCCCCHHCCCEEEEECHHHHHCCHHHHHHCCHHHHCCCCEEEECHHHCCEEEECCC
WLRSPEGLAALSGNAVPSASDPIALAYAGHQFGHFVPQLGDGRAILLGEVVDRNGVRRDI
CCCCCCCCEEECCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEHHHCCCCCCEEE
QLKGAGRTPYSRRGDGRAALGPVLREYIVSEAMAALGVPTTRALAAVATGERVQREIGLP
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
GAVLTRVAASHIRVGTFQFVAARRDETALRSLADYVIGRHYPEAAEADNPYLALLNLVIR
HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AQARLVAHWVSLGFIHGVMNTDNMAVSGETIDYGPCAFLDAYDPNKVFSSIDEFGRYAFG
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC
NQSRVAMWNLARLAEALLPLIDTSPDRAVAQAEEALMTFMPHFDAARLFHMRAKLGLSTE
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TPEDAGLIEDLLSAMHEMQADFTLTFRALSSLPVDGAPVALIGAFAEGPLRDWSARYAAR
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHEEEHHCCCCCHHHCCCEEEE
VTLDPRPAEVRRQAMEAANPRFIPRNHRIEEVIRAAVSDGDYVPFHDMVAVLAAPYAEQP
EEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
DKAAYAEPPAPGEEVLRTFCGT
CCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PILRTIPFARQVPMTIAFENTFRSLPDTLFAPVVPSAVRQPELIRLNDELAGELKLDAG
CCCCCCCCHHCCCEEEEECHHHHHCCHHHHHHCCHHHHCCCCEEEECHHHCCEEEECCC
WLRSPEGLAALSGNAVPSASDPIALAYAGHQFGHFVPQLGDGRAILLGEVVDRNGVRRDI
CCCCCCCCEEECCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEHHHCCCCCCEEE
QLKGAGRTPYSRRGDGRAALGPVLREYIVSEAMAALGVPTTRALAAVATGERVQREIGLP
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
GAVLTRVAASHIRVGTFQFVAARRDETALRSLADYVIGRHYPEAAEADNPYLALLNLVIR
HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AQARLVAHWVSLGFIHGVMNTDNMAVSGETIDYGPCAFLDAYDPNKVFSSIDEFGRYAFG
HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC
NQSRVAMWNLARLAEALLPLIDTSPDRAVAQAEEALMTFMPHFDAARLFHMRAKLGLSTE
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TPEDAGLIEDLLSAMHEMQADFTLTFRALSSLPVDGAPVALIGAFAEGPLRDWSARYAAR
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHEEEHHCCCCCHHHCCCEEEE
VTLDPRPAEVRRQAMEAANPRFIPRNHRIEEVIRAAVSDGDYVPFHDMVAVLAAPYAEQP
EEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
DKAAYAEPPAPGEEVLRTFCGT
CCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA