| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is insC1 [C]
Identifier: 158422907
GI number: 158422907
Start: 1437617
End: 1438057
Strand: Direct
Name: insC1 [C]
Synonym: AZC_1283
Alternate gene names: 158422907
Gene position: 1437617-1438057 (Clockwise)
Preceding gene: 158422906
Following gene: 158422908
Centisome position: 26.77
GC content: 68.03
Gene sequence:
>441_bases ATGACGATTTCAGAGCTTACGCTTAAATCTAGCGCCGAGGAGCCGGTGCGGCGGTTCGAGGTTTTCACCGGAGCCGGGCG TCGCCGAGAGTGGGCTCCCGAGGAGAAGGCGCGGATTGTCACCGAGAGCTTTGAGCCTGGAGCCACGGTGAGTGCAGTGG CGCGCCGCCACGGACTGTCGCCGCAGCAGTTGTTCACGTGGCGCCGTGAGGCGCGGAAAGCGAGCGAGACGATCCCGGCT TTCGTGCCGGCGGTGGTCGCTCCGGAACCGGTTCCCGCATCTGAGCCGTCCGCCCAACCGTCACGGCCGAAGCCGCGTGA TCGGCAACGTCGCGCGGCAGCCATCGAGGTCGACGTCGCCGGGGTCAGGGTGACGATTGAGAACGGGGCCTCGCCCGCCA CCATCGCAGCGGTGCTCGGCGCGCTGAAGGCCGGATCGTGA
Upstream 100 bases:
>100_bases TTCGCTGCGCTGGTCACAAACGGCGTAAGCGTCGTCCTACCCCCACCTTTCGCCGGCGAGGCTGAGGGGGCGATGTTCCG AGCCTGGAGGGCTTGGACAT
Downstream 100 bases:
>100_bases TCGGCCCGAGCGGCGCGGTCCGGGTCATGGTGGCGACACGGCCGGTGGACTTCCGCAAGGGGGCGGAGGGTCTCGCCGCT TTGGTGCGCGAGACCATGGG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTISELTLKSSAEEPVRRFEVFTGAGRRREWAPEEKARIVTESFEPGATVSAVARRHGLSPQQLFTWRREARKASETIPA FVPAVVAPEPVPASEPSAQPSRPKPRDRQRRAAAIEVDVAGVRVTIENGASPATIAAVLGALKAGS
Sequences:
>Translated_146_residues MTISELTLKSSAEEPVRRFEVFTGAGRRREWAPEEKARIVTESFEPGATVSAVARRHGLSPQQLFTWRREARKASETIPA FVPAVVAPEPVPASEPSAQPSRPKPRDRQRRAAAIEVDVAGVRVTIENGASPATIAAVLGALKAGS >Mature_145_residues TISELTLKSSAEEPVRRFEVFTGAGRRREWAPEEKARIVTESFEPGATVSAVARRHGLSPQQLFTWRREARKASETIPAF VPAVVAPEPVPASEPSAQPSRPKPRDRQRRAAAIEVDVAGVRVTIENGASPATIAAVLGALKAGS
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
Organism=Escherichia coli, GI145693215, Length=111, Percent_Identity=38.7387387387387, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI145693180, Length=111, Percent_Identity=38.7387387387387, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI145693177, Length=111, Percent_Identity=38.7387387387387, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI145693154, Length=111, Percent_Identity=38.7387387387387, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI145693126, Length=111, Percent_Identity=38.7387387387387, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI145693097, Length=111, Percent_Identity=38.7387387387387, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 15707; Mature: 15576
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISELTLKSSAEEPVRRFEVFTGAGRRREWAPEEKARIVTESFEPGATVSAVARRHGLS CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC PQQLFTWRREARKASETIPAFVPAVVAPEPVPASEPSAQPSRPKPRDRQRRAAAIEVDVA HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEC GVRVTIENGASPATIAAVLGALKAGS EEEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TISELTLKSSAEEPVRRFEVFTGAGRRREWAPEEKARIVTESFEPGATVSAVARRHGLS CCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC PQQLFTWRREARKASETIPAFVPAVVAPEPVPASEPSAQPSRPKPRDRQRRAAAIEVDVA HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEC GVRVTIENGASPATIAAVLGALKAGS EEEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]