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The map label for this gene is 158422874

Identifier: 158422874

GI number: 158422874

Start: 1400316

End: 1400783

Strand: Reverse

Name: 158422874

Synonym: AZC_1250

Alternate gene names: NA

Gene position: 1400783-1400316 (Counterclockwise)

Preceding gene: 158422875

Following gene: 158422871

Centisome position: 26.09

GC content: 72.01

Gene sequence:

>468_bases
ATGCGGCACCCCCTCCTCTCCATCGCTCTCGGCGTCGGCATCGGCGCCTGCGCGGTCGCTCTGGCATGGCGGTTCTGGCC
GGGCTTCGCGCCGAGCCAGCGCCCGCCCCGGCCGGTGCCGGAAAACGCCACCCTCGCCGACCTGCTCCGCGATGCGGACC
CGGCCGCCGGAGCGCAGGTCTTCCGCATCTGCGGATCCTGCCATTCCGTCGGACGCGCCGGCGGCAATCTCGACGGACCG
AACCTCCATGGCGTGATGGGCAGCCTGATCGGCCGGAACAGCCCGCGCTTCAGCTACACCGCTGCCCTGCAAGCGGTGGG
CGGACGCTGGACGCTCGAGCGGATGGATGCCTGGCTGAAGGACCCGCAAGCCTTTGCGCCCGGCACCAGCATGGGCTTTG
CCGGGCTTGAGTCCGCCCGCGACCGGGCCGACGTCATCGCCTACCTGATGCGGCAGACGGGGCCCTGA

Upstream 100 bases:

>100_bases
CAACACCAACACCGGCGTACTGACGCCCGAGATGTTCCGCGCCGTCTTCTCGCAGGTCCGAAGCTTCCTCGACGCTGCCT
GAGGGGGCCACGGGGCGGAC

Downstream 100 bases:

>100_bases
GACCCGTCAGAACAGCGTGCGCATGGAGACGAGATCGAACGGCACCGCGTGACCCGCAAGGTTCCACATGCCCGCGGTCT
CGCGGATGACCAGGAAGAAG

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRHPLLSIALGVGIGACAVALAWRFWPGFAPSQRPPRPVPENATLADLLRDADPAAGAQVFRICGSCHSVGRAGGNLDGP
NLHGVMGSLIGRNSPRFSYTAALQAVGGRWTLERMDAWLKDPQAFAPGTSMGFAGLESARDRADVIAYLMRQTGP

Sequences:

>Translated_155_residues
MRHPLLSIALGVGIGACAVALAWRFWPGFAPSQRPPRPVPENATLADLLRDADPAAGAQVFRICGSCHSVGRAGGNLDGP
NLHGVMGSLIGRNSPRFSYTAALQAVGGRWTLERMDAWLKDPQAFAPGTSMGFAGLESARDRADVIAYLMRQTGP
>Mature_155_residues
MRHPLLSIALGVGIGACAVALAWRFWPGFAPSQRPPRPVPENATLADLLRDADPAAGAQVFRICGSCHSVGRAGGNLDGP
NLHGVMGSLIGRNSPRFSYTAALQAVGGRWTLERMDAWLKDPQAFAPGTSMGFAGLESARDRADVIAYLMRQTGP

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=102, Percent_Identity=39.2156862745098, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=98, Percent_Identity=40.8163265306122, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320796, Length=96, Percent_Identity=38.5416666666667, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=96, Percent_Identity=38.5416666666667, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137204, Length=98, Percent_Identity=41.8367346938776, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137228, Length=102, Percent_Identity=39.2156862745098, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 16396; Mature: 16396

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPLLSIALGVGIGACAVALAWRFWPGFAPSQRPPRPVPENATLADLLRDADPAAGAQV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHH
FRICGSCHSVGRAGGNLDGPNLHGVMGSLIGRNSPRFSYTAALQAVGGRWTLERMDAWLK
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHC
DPQAFAPGTSMGFAGLESARDRADVIAYLMRQTGP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHPLLSIALGVGIGACAVALAWRFWPGFAPSQRPPRPVPENATLADLLRDADPAAGAQV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHH
FRICGSCHSVGRAGGNLDGPNLHGVMGSLIGRNSPRFSYTAALQAVGGRWTLERMDAWLK
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHC
DPQAFAPGTSMGFAGLESARDRADVIAYLMRQTGP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]