| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is bcpB [C]
Identifier: 158422872
GI number: 158422872
Start: 1398102
End: 1398812
Strand: Direct
Name: bcpB [C]
Synonym: AZC_1248
Alternate gene names: 158422872
Gene position: 1398102-1398812 (Clockwise)
Preceding gene: 158422869
Following gene: 158422873
Centisome position: 26.04
GC content: 67.51
Gene sequence:
>711_bases ATGTTGCTGCAAGGTCTGCGCAAGCCTTCCATGTTGCGCGCTCGATGCGGGGCGCTGACGGTGCGGCCGGAGGCGGGCAA ACCTCTGGCGGCGGTGTCAGGCTGCGCTACAATCGGGCGCGTTTGGATACCGTCACCCGGAGCATGTCAGATGAGTGCCC TCGATCCCGCCGCCTTGCCCGTGCCCGAGGATGACGGCGCCGCAGACCATCTGCCGGGGCTGGAGCTGCCGATCATCCGG CTCATGGGCACCCATGGCCATCCGGTGGATCTCTCCGACCTGTCCGGTCGTGCGGTGGTCTATGTCTATCCGCGCACCGC GCGGCCGGGCGAGCCGCCGCTGGAGGGGTGGGACGAAATACCTGGCGCCCGCGGCTGCACCGTGCAGTCCTGCGCGTTCC GGGACCATCTGGAGGATCTGCGGGCCGTCGGCATCGAGCACGTCTTCGGCCTCTCGGCGCAGGACACGGAACATCAGAAG GAAGTGGCCACACGCCTCAACCTGCCGTTTCCGCTGCTCTCCGACCATGGCCTGCAACTGGCCCGCGCCATCCGGCTCCC CACCTTCGAGGTCGGCGGGCTCAAACTCCTCAAGCGGCTCACGCTGGTCGTGGAAGATGGGGCCATCGCCCACACCTTCT ATCCCGTGTTTCCGCCCGAGGAGAGCGCGCGGCAGGTGGTCGAGTTCTTCCGGACCTATGACAGGGGCTGA
Upstream 100 bases:
>100_bases TGTATTCGGGACGCTACGGCAAGCAGGGATACTTTCCGAGATCGGACGGATATTTTTAATCCGGCCGTAATCTTCAGGCC GTTGCGGCAGGTTTGCGTGC
Downstream 100 bases:
>100_bases CCGGATCATCCGACCTTCCCCGGAGGTTGCGGGTTAAGGCATTGAGGAAGCGATGGATTTATCGCTTCTCCCCCCCCTCT GTCCGGCGCTAGCCTTCGCC
Product: BcpB protein
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: BcpB Protein; Redoxin; Peroxiredoxin; Thiol-Specific Antioxidant Related Protein; Transcriptional Regulator; HxlR Family Transcriptional Regulator; Antioxidant; Redoxin Domain Protein; Bacterioferritin Comigratory Protein; Bacterioferritin Comigratory Protein BcpB; Anti-Oxidant AhpCTSA Family Protein; Thiol-Specific Antioxidant Related Protein/Peroxidoxin BcpB; Thioredoxin Peroxidase Family Protein; Redoxin Superfamily; Peroxiredoxin Family
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MLLQGLRKPSMLRARCGALTVRPEAGKPLAAVSGCATIGRVWIPSPGACQMSALDPAALPVPEDDGAADHLPGLELPIIR LMGTHGHPVDLSDLSGRAVVYVYPRTARPGEPPLEGWDEIPGARGCTVQSCAFRDHLEDLRAVGIEHVFGLSAQDTEHQK EVATRLNLPFPLLSDHGLQLARAIRLPTFEVGGLKLLKRLTLVVEDGAIAHTFYPVFPPEESARQVVEFFRTYDRG
Sequences:
>Translated_236_residues MLLQGLRKPSMLRARCGALTVRPEAGKPLAAVSGCATIGRVWIPSPGACQMSALDPAALPVPEDDGAADHLPGLELPIIR LMGTHGHPVDLSDLSGRAVVYVYPRTARPGEPPLEGWDEIPGARGCTVQSCAFRDHLEDLRAVGIEHVFGLSAQDTEHQK EVATRLNLPFPLLSDHGLQLARAIRLPTFEVGGLKLLKRLTLVVEDGAIAHTFYPVFPPEESARQVVEFFRTYDRG >Mature_236_residues MLLQGLRKPSMLRARCGALTVRPEAGKPLAAVSGCATIGRVWIPSPGACQMSALDPAALPVPEDDGAADHLPGLELPIIR LMGTHGHPVDLSDLSGRAVVYVYPRTARPGEPPLEGWDEIPGARGCTVQSCAFRDHLEDLRAVGIEHVFGLSAQDTEHQK EVATRLNLPFPLLSDHGLQLARAIRLPTFEVGGLKLLKRLTLVVEDGAIAHTFYPVFPPEESARQVVEFFRTYDRG
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25576; Mature: 25576
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQGLRKPSMLRARCGALTVRPEAGKPLAAVSGCATIGRVWIPSPGACQMSALDPAALP CCCCCCCCCHHHHHHHCEEEECCCCCCCHHHHHHHHHHCEEECCCCCCEEECCCCCCCCC VPEDDGAADHLPGLELPIIRLMGTHGHPVDLSDLSGRAVVYVYPRTARPGEPPLEGWDEI CCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHC PGARGCTVQSCAFRDHLEDLRAVGIEHVFGLSAQDTEHQKEVATRLNLPFPLLSDHGLQL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH ARAIRLPTFEVGGLKLLKRLTLVVEDGAIAHTFYPVFPPEESARQVVEFFRTYDRG HHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLQGLRKPSMLRARCGALTVRPEAGKPLAAVSGCATIGRVWIPSPGACQMSALDPAALP CCCCCCCCCHHHHHHHCEEEECCCCCCCHHHHHHHHHHCEEECCCCCCEEECCCCCCCCC VPEDDGAADHLPGLELPIIRLMGTHGHPVDLSDLSGRAVVYVYPRTARPGEPPLEGWDEI CCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHC PGARGCTVQSCAFRDHLEDLRAVGIEHVFGLSAQDTEHQKEVATRLNLPFPLLSDHGLQL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH ARAIRLPTFEVGGLKLLKRLTLVVEDGAIAHTFYPVFPPEESARQVVEFFRTYDRG HHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA