| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422848
Identifier: 158422848
GI number: 158422848
Start: 1372954
End: 1373862
Strand: Direct
Name: 158422848
Synonym: AZC_1224
Alternate gene names: NA
Gene position: 1372954-1373862 (Clockwise)
Preceding gene: 158422846
Following gene: 158422852
Centisome position: 25.57
GC content: 66.89
Gene sequence:
>909_bases GTGCGCGCGTGGGACTGTGATGTTCAGGTCACGGTCTTGCCTCAATTGACACCGAACAGAGCGGCGTTACAGAGGCGGAA TGCAACGCCGCCAATTCGAGTCTCGCGCTCGGCGACCGGCATGACAGGGAAGATGGGAATGACGACAGCCACCATTTTGC GTCGCGCGAGCGCTCTCGCCGTCGCCGCGATGACGCTTGGTGTTGCGAGCGGGGCCCTGGCCCAGAACGCGGCCCCGGCC AAGCCGGCTCCGGCCAAGCCCGCGCAGGGCCAGCAGGCGCCTGCGCAGGCTCAGCAGCAGCAGGCTGCCGGTCCGCAGTC CGTGGCCGTGCCCGGCATCAACACTCCCTGGACCAAGGTCTGCGGCACCGATCAGGCCGCCAACAAGCAGATCTGCATGA CCACGCAGGACTTCACCGCCGAGACCGGCCAGCCGCTGGCCTCTGCCGCCATCCGCGAGATGCAGGACGATCCGGTCAAG AAGTTCATCGTGTCGGTTCCGATCGGCATGCTGATCCAGCCCGGCACCCGCGTGGTGATCGACAAGGAAGCGCCGCTTTC GCTCAAGTACGAAATCTGCTTCCCCAACGGCTGCTTCGCCAGCATGGACGTGAATGCCGAATTCGTGACCAAGCTCAAGA AGGCGCAGAACATCACCATCCAGGCGCTGCAGATGGGCGGTCGCACGCTCAACTTCGTGCTGCCGGCCAAGGACTTCGCC AAGGCCTATGACGGCGCCCCGTCCGATCCGAACGTGGTTGCGGCCGAGCGTCAGAAGCTGGCGGAAGAGCTTCAGAAGCG CGCCCAGAAGATGATGGAAGAGCGTGCTGCGGCCCAGGGCGGCGCCCCCGCCCAGGGTGCTGCGGCCCCGGCTCCCGCCG CGGCCCCGGCGGCTCCCGCCAAGCCCTGA
Upstream 100 bases:
>100_bases GGCTCCGGTCCAATCGTCACAGCCTCCGTCAGACGTCAGAAATCCTGCCACGCTGTCGCGTGGTGGCCGCATTCCTGTTC AAGGTAGCACGTCACACGCC
Downstream 100 bases:
>100_bases TCGCGCATCGAAGCAGCGTTGGAAAAACGAACGGCCCGCCAATCGGCGGGCCGTTCTGCATTTGCGGACCTCGACGCCTC AGGCGGTGCGGATGCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Invasion Associated Locus B; Signal Peptide; Invasion Associated Locus B Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRAWDCDVQVTVLPQLTPNRAALQRRNATPPIRVSRSATGMTGKMGMTTATILRRASALAVAAMTLGVASGALAQNAAPA KPAPAKPAQGQQAPAQAQQQQAAGPQSVAVPGINTPWTKVCGTDQAANKQICMTTQDFTAETGQPLASAAIREMQDDPVK KFIVSVPIGMLIQPGTRVVIDKEAPLSLKYEICFPNGCFASMDVNAEFVTKLKKAQNITIQALQMGGRTLNFVLPAKDFA KAYDGAPSDPNVVAAERQKLAEELQKRAQKMMEERAAAQGGAPAQGAAAPAPAAAPAAPAKP
Sequences:
>Translated_302_residues MRAWDCDVQVTVLPQLTPNRAALQRRNATPPIRVSRSATGMTGKMGMTTATILRRASALAVAAMTLGVASGALAQNAAPA KPAPAKPAQGQQAPAQAQQQQAAGPQSVAVPGINTPWTKVCGTDQAANKQICMTTQDFTAETGQPLASAAIREMQDDPVK KFIVSVPIGMLIQPGTRVVIDKEAPLSLKYEICFPNGCFASMDVNAEFVTKLKKAQNITIQALQMGGRTLNFVLPAKDFA KAYDGAPSDPNVVAAERQKLAEELQKRAQKMMEERAAAQGGAPAQGAAAPAPAAAPAAPAKP >Mature_302_residues MRAWDCDVQVTVLPQLTPNRAALQRRNATPPIRVSRSATGMTGKMGMTTATILRRASALAVAAMTLGVASGALAQNAAPA KPAPAKPAQGQQAPAQAQQQQAAGPQSVAVPGINTPWTKVCGTDQAANKQICMTTQDFTAETGQPLASAAIREMQDDPVK KFIVSVPIGMLIQPGTRVVIDKEAPLSLKYEICFPNGCFASMDVNAEFVTKLKKAQNITIQALQMGGRTLNFVLPAKDFA KAYDGAPSDPNVVAAERQKLAEELQKRAQKMMEERAAAQGGAPAQGAAAPAPAAAPAAPAKP
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31518; Mature: 31518
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAWDCDVQVTVLPQLTPNRAALQRRNATPPIRVSRSATGMTGKMGMTTATILRRASALA CCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH VAAMTLGVASGALAQNAAPAKPAPAKPAQGQQAPAQAQQQQAAGPQSVAVPGINTPWTKV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCHHHH CGTDQAANKQICMTTQDFTAETGQPLASAAIREMQDDPVKKFIVSVPIGMLIQPGTRVVI CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCEEEE DKEAPLSLKYEICFPNGCFASMDVNAEFVTKLKKAQNITIQALQMGGRTLNFVLPAKDFA ECCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCHHHH KAYDGAPSDPNVVAAERQKLAEELQKRAQKMMEERAAAQGGAPAQGAAAPAPAAAPAAPA HHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC KP CC >Mature Secondary Structure MRAWDCDVQVTVLPQLTPNRAALQRRNATPPIRVSRSATGMTGKMGMTTATILRRASALA CCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH VAAMTLGVASGALAQNAAPAKPAPAKPAQGQQAPAQAQQQQAAGPQSVAVPGINTPWTKV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCHHHH CGTDQAANKQICMTTQDFTAETGQPLASAAIREMQDDPVKKFIVSVPIGMLIQPGTRVVI CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCEEEE DKEAPLSLKYEICFPNGCFASMDVNAEFVTKLKKAQNITIQALQMGGRTLNFVLPAKDFA ECCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCHHHH KAYDGAPSDPNVVAAERQKLAEELQKRAQKMMEERAAAQGGAPAQGAAAPAPAAAPAAPA HHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC KP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA