| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422750
Identifier: 158422750
GI number: 158422750
Start: 1249007
End: 1249444
Strand: Direct
Name: 158422750
Synonym: AZC_1126
Alternate gene names: NA
Gene position: 1249007-1249444 (Clockwise)
Preceding gene: 158422749
Following gene: 158422751
Centisome position: 23.26
GC content: 73.74
Gene sequence:
>438_bases GTGACGGGCGCCGCGCGCCGCGCCGCCATCGTAGCGGAAGCCCGTGCCTGGATCGGCACGCCCTATCATCACCGGGCCTC CGTGAGGGGCGAGGGGACCGATTGCCTCGGCCTGGTGCGCGGCGTCTGGCGGGCGGTGATGGGCGCGGAGCCCGAGCCTC TTCCGCCCTATGCCGCCGACTGGGCGGAGGCGTCGCGCACGGAGACGCTCATCGCCGCCGCCGGCCGCCATCTGGTGCCG GTCCAGACGGCAGCCATGCAGCCCGGCGACGTGCTGCTCTTCCGCTTCCGCACCCACCTTCCCGCCAAGCACTGCGCCCT GTTGAGCGCACCGGGGCGGATGATCCATGCCTATGACGGCGCGGCGGTGTGCGAGGGCGACTTCGCCCCGTGGTGGCAGC GGCATCTGGCGGCGGTCTTCGCCTTTCCGGGCCGCTGA
Upstream 100 bases:
>100_bases ACGCCCGCAATTTTCGCGGCTGCCCGCACATGCCGGGCAATGACTTCGTCTTCTCCGTCGCTGCGCTCGGGGAGGCCGCC TATGACGGCGGCACCCTCGC
Downstream 100 bases:
>100_bases GCCGGCGCGGCCTGCCTTCCTGAACTCCGGAGACACATCATGGCGACGCTCCTTCTCGGCGCGGCGGGCAGCGCCGTCGG CAGCCTGTTTGGTCCCATCG
Product: phage cell wall peptidase
Products: NA
Alternate protein names: NlpC/P60 Family Phage Cell Wall Peptidase; Phage Cell Wall Peptidase NlpC/P; Phage Cell Wall Peptidase Of NlpC/P60 Family; Spr-Family Cell Wall-Associated Hydrolase; Phage Cell Wall Peptidase
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTGAARRAAIVAEARAWIGTPYHHRASVRGEGTDCLGLVRGVWRAVMGAEPEPLPPYAADWAEASRTETLIAAAGRHLVP VQTAAMQPGDVLLFRFRTHLPAKHCALLSAPGRMIHAYDGAAVCEGDFAPWWQRHLAAVFAFPGR
Sequences:
>Translated_145_residues MTGAARRAAIVAEARAWIGTPYHHRASVRGEGTDCLGLVRGVWRAVMGAEPEPLPPYAADWAEASRTETLIAAAGRHLVP VQTAAMQPGDVLLFRFRTHLPAKHCALLSAPGRMIHAYDGAAVCEGDFAPWWQRHLAAVFAFPGR >Mature_144_residues TGAARRAAIVAEARAWIGTPYHHRASVRGEGTDCLGLVRGVWRAVMGAEPEPLPPYAADWAEASRTETLIAAAGRHLVPV QTAAMQPGDVLLFRFRTHLPAKHCALLSAPGRMIHAYDGAAVCEGDFAPWWQRHLAAVFAFPGR
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15676; Mature: 15545
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAARRAAIVAEARAWIGTPYHHRASVRGEGTDCLGLVRGVWRAVMGAEPEPLPPYAAD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC WAEASRTETLIAAAGRHLVPVQTAAMQPGDVLLFRFRTHLPAKHCALLSAPGRMIHAYDG HHHHHHHHHHHHHCCCCEEECHHHHCCCCCEEEEEEHHHCCHHHHHEECCCCCEEEECCC AAVCEGDFAPWWQRHLAAVFAFPGR CEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TGAARRAAIVAEARAWIGTPYHHRASVRGEGTDCLGLVRGVWRAVMGAEPEPLPPYAAD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC WAEASRTETLIAAAGRHLVPVQTAAMQPGDVLLFRFRTHLPAKHCALLSAPGRMIHAYDG HHHHHHHHHHHHHCCCCEEECHHHHCCCCCEEEEEEHHHCCHHHHHEECCCCCEEEECCC AAVCEGDFAPWWQRHLAAVFAFPGR CEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA