| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158422745
Identifier: 158422745
GI number: 158422745
Start: 1245311
End: 1245976
Strand: Direct
Name: 158422745
Synonym: AZC_1121
Alternate gene names: NA
Gene position: 1245311-1245976 (Clockwise)
Preceding gene: 158422744
Following gene: 158422748
Centisome position: 23.19
GC content: 72.07
Gene sequence:
>666_bases ATGGAGACGAGCGATCCCGTTTCGCTGGCCCTCACCGCCGACACGTCCGGCTTCACCGCCGGCCTGGCGGAAGCGGAGGC CTCCGCCCGCAACTTCAGCGCCGGCGTGACCTCGGCTTTCTCCGCCGCCGAAGTGCCGGCGCGGGGTTTTTCCAGCGCGC TGGGGGATGCCTTCGCCAGCGTCGCTGTGAAGGGGCGCGATCTCGATACGGTGCTGGCGGGGCTGGGCCAGCGGCTTTCC GGCATGGCGCTGAATGCGGCGCTGAAGCCGCTGGAGCAGGGGATCAGCAACAGCATCGGCCAGCTCTTCTCCGGCGCCTT CGCAAACGGCGGGGTGCTGGAGGCGGGCGCGGTGCGCGCCTTCGCGGACGGCGGCGTGGTGTCCGGTGTCCGGGCCTTTG CCGAGGGCGGGGTGGTGGCGGCGCCGACCTATTTTCCCATGGCGTCCGGCGTCGGCCTCATGGGGGAGGCGGGGGCGGAA GCCATCCTGCCTCTGGCGCGTGGGGCGGACGGGGCGCTCGGCGTACGCACACAGGCGAGCGGCGGTGGGACGACGACGGT GAATGTCTCGGTATCAACGCCCGATGCGGGCGCCTTCCGCCGCTCCGATGCCTATCTGTCCGGGCTCATTGCCCGCGCCG TGGCGCGCGGTCAGCGCAGCCTGTGA
Upstream 100 bases:
>100_bases CCTGCCGCCCGCCCGCTGCCACGTCTTCCGGCCTCGATCGCGCTGGCCTCGCCGCGCTGATGGCCCGCTTTCCCGACACG ACACGGAGATAGAGATAGAG
Downstream 100 bases:
>100_bases GACGGTGGGCGGTTCCTTCAGCGCATCTGCTTCCAGGGATCACCGGCCGGTGCCGGCGTGCCGGACGCGGCGGCGGTGGG CGTGTTGGTGAAACCCTGGT
Product: gene transfer agent (GTA) orfg11
Products: NA
Alternate protein names: Tail Tape Measure Protein; Gene Transfer Agent Like Protein; Phage Tail Minor Protein; Phage-Related Minor Tail Protein-Like; PHage Minor Tail Protein H; Minor Tail Protein; Tapemeasure Protein; Phage-Related Minor Tail Protein; Phage-Related Minor Tail Protein-Like Protein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues METSDPVSLALTADTSGFTAGLAEAEASARNFSAGVTSAFSAAEVPARGFSSALGDAFASVAVKGRDLDTVLAGLGQRLS GMALNAALKPLEQGISNSIGQLFSGAFANGGVLEAGAVRAFADGGVVSGVRAFAEGGVVAAPTYFPMASGVGLMGEAGAE AILPLARGADGALGVRTQASGGGTTTVNVSVSTPDAGAFRRSDAYLSGLIARAVARGQRSL
Sequences:
>Translated_221_residues METSDPVSLALTADTSGFTAGLAEAEASARNFSAGVTSAFSAAEVPARGFSSALGDAFASVAVKGRDLDTVLAGLGQRLS GMALNAALKPLEQGISNSIGQLFSGAFANGGVLEAGAVRAFADGGVVSGVRAFAEGGVVAAPTYFPMASGVGLMGEAGAE AILPLARGADGALGVRTQASGGGTTTVNVSVSTPDAGAFRRSDAYLSGLIARAVARGQRSL >Mature_221_residues METSDPVSLALTADTSGFTAGLAEAEASARNFSAGVTSAFSAAEVPARGFSSALGDAFASVAVKGRDLDTVLAGLGQRLS GMALNAALKPLEQGISNSIGQLFSGAFANGGVLEAGAVRAFADGGVVSGVRAFAEGGVVAAPTYFPMASGVGLMGEAGAE AILPLARGADGALGVRTQASGGGTTTVNVSVSTPDAGAFRRSDAYLSGLIARAVARGQRSL
Specific function: Unknown
COG id: COG5281
COG function: function code S; Phage-related minor tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21602; Mature: 21602
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSDPVSLALTADTSGFTAGLAEAEASARNFSAGVTSAFSAAEVPARGFSSALGDAFAS CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH VAVKGRDLDTVLAGLGQRLSGMALNAALKPLEQGISNSIGQLFSGAFANGGVLEAGAVRA HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEE FADGGVVSGVRAFAEGGVVAAPTYFPMASGVGLMGEAGAEAILPLARGADGALGVRTQAS CCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECC GGGTTTVNVSVSTPDAGAFRRSDAYLSGLIARAVARGQRSL CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure METSDPVSLALTADTSGFTAGLAEAEASARNFSAGVTSAFSAAEVPARGFSSALGDAFAS CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH VAVKGRDLDTVLAGLGQRLSGMALNAALKPLEQGISNSIGQLFSGAFANGGVLEAGAVRA HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEE FADGGVVSGVRAFAEGGVVAAPTYFPMASGVGLMGEAGAEAILPLARGADGALGVRTQAS CCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECC GGGTTTVNVSVSTPDAGAFRRSDAYLSGLIARAVARGQRSL CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA