| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422713
Identifier: 158422713
GI number: 158422713
Start: 1217858
End: 1218376
Strand: Direct
Name: 158422713
Synonym: AZC_1089
Alternate gene names: NA
Gene position: 1217858-1218376 (Clockwise)
Preceding gene: 158422712
Following gene: 158422714
Centisome position: 22.68
GC content: 73.8
Gene sequence:
>519_bases ATGCCCCGCCGTGCGGCCTCCGGTCGCCACCCGCCTGCGCGCACCGCAGCTCCGGTCGTCACCGATGAGAGCCCGCTCGA CTGGCTCGCCCGCCGCAGGGGGCGCGACGGCACGCCCCTGATCACTCCGGCCCAGCAGGGCGCCGGAGAACGGCTGCGGC GGGATTTCACGCAGGCCGGCCTCACGCCCCGCGTCACCGCCAACTGGTCGGCGCTCGGCACGGGGGCGGCCGGTGCCGCG GGCAGCCCCGGCAGCTTCAGCGACGTGGTGCTTGCGGCCAAGACGCGCTTTGCGCTGGCGATGCGCGCGCTCGGTCCGGA ACTCTCGGGTACTGTCGTCGATGTTTGCTGTTTTCTGAAAGGACTGGAAACCGTGGAAAGCGAGCGGCGCTGGCCGCCGC GCACCGCGAAGGTCGTGCTCGGGCTGGGTCTCGACCGGCTGGCCCGTCACTACGGCCTTGCCTCGCAGGCGCAGGGACGG GGCACGGCGCCGACGCGGGCCTGGCATGCGGGGGAGTGA
Upstream 100 bases:
>100_bases GCCTGCGCATCGAGGAGCGGCGGGAGGCGCCGGCCTTCGACGGCGACGTGACCGTGCTGGAGGCAGGCCTGCGCTGGGTG GCCGCGCGATGAGCCGGGCC
Downstream 100 bases:
>100_bases TCGTCTGTGCATCGCGGCAGGCCGGATCATTCCACCGCTTGACCATCAGCCATGGGGCGGGGTCATCATGGGTGGTCCGA ACGTGGTGGGGGCATGGATG
Product: translation initiation factor IF-2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPRRAASGRHPPARTAAPVVTDESPLDWLARRRGRDGTPLITPAQQGAGERLRRDFTQAGLTPRVTANWSALGTGAAGAA GSPGSFSDVVLAAKTRFALAMRALGPELSGTVVDVCCFLKGLETVESERRWPPRTAKVVLGLGLDRLARHYGLASQAQGR GTAPTRAWHAGE
Sequences:
>Translated_172_residues MPRRAASGRHPPARTAAPVVTDESPLDWLARRRGRDGTPLITPAQQGAGERLRRDFTQAGLTPRVTANWSALGTGAAGAA GSPGSFSDVVLAAKTRFALAMRALGPELSGTVVDVCCFLKGLETVESERRWPPRTAKVVLGLGLDRLARHYGLASQAQGR GTAPTRAWHAGE >Mature_171_residues PRRAASGRHPPARTAAPVVTDESPLDWLARRRGRDGTPLITPAQQGAGERLRRDFTQAGLTPRVTANWSALGTGAAGAAG SPGSFSDVVLAAKTRFALAMRALGPELSGTVVDVCCFLKGLETVESERRWPPRTAKVVLGLGLDRLARHYGLASQAQGRG TAPTRAWHAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18173; Mature: 18042
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRAASGRHPPARTAAPVVTDESPLDWLARRRGRDGTPLITPAQQGAGERLRRDFTQAG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHC LTPRVTANWSALGTGAAGAAGSPGSFSDVVLAAKTRFALAMRALGPELSGTVVDVCCFLK CCCCEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GLETVESERRWPPRTAKVVLGLGLDRLARHYGLASQAQGRGTAPTRAWHAGE HHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRRAASGRHPPARTAAPVVTDESPLDWLARRRGRDGTPLITPAQQGAGERLRRDFTQAG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHC LTPRVTANWSALGTGAAGAAGSPGSFSDVVLAAKTRFALAMRALGPELSGTVVDVCCFLK CCCCEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GLETVESERRWPPRTAKVVLGLGLDRLARHYGLASQAQGRGTAPTRAWHAGE HHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA