| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mucR
Identifier: 158422710
GI number: 158422710
Start: 1216315
End: 1216857
Strand: Direct
Name: mucR
Synonym: AZC_1086
Alternate gene names: NA
Gene position: 1216315-1216857 (Clockwise)
Preceding gene: 158422707
Following gene: 158422712
Centisome position: 22.65
GC content: 61.51
Gene sequence:
>543_bases ATGAGTGGCGCCCGTCGAATCGCAGCGCTCTCGCAGCGATATCCGCGCGTTTGGCGCAAGCTCGAATTTTCCCGTCGCGG TCAGCACGCCGTTGTGAAATTTGTTTCCAAACTTGAAGAAAGACCCATGAGCGAAGCTACGGAATCGACCACCTACATCG AGCTGGCTGCGGATATCGTCTCCGCTTACGTCAGCAACAACTCGGTCGCGGCGGCAGACCTCCCCAACCTCATCAATGAG GTTCATGCAGCGCTCCAGCGTGTCTCCAAGGGCGAGAGTGAGCCGGCGCCCGAGCCGCTGAAGCCCGCGGTGCCCGTCAA GAAGTCCGTCACCCCGGATTTCATCGTCTGTCTCGAAGACGGCAAGAAGTTCAAGTCGCTGAAGCGCCACCTGCGCACGC AGTACAACATGAGCCCCGAGCAGTATCGCGAGAAGTGGGCCCTGCCGCCGGATTATCCGATGGTCGCCCCCAATTACGCG GCCGCCCGCTCCGAACTCGCCAAGCAGATGGGTCTCGGCCAGCAGCGTCGCCGCCGTCGTTGA
Upstream 100 bases:
>100_bases CTCTCGCATGGTGGAGCGCCGTTTCCAAAGAGCAGGGAAGAAGAACGTTGAAACACGCCAAAATGAACTTGCAATTCATG GCAGATCAACATAGGTAGGC
Downstream 100 bases:
>100_bases GCGCTTGCCGAACGTTATGCCAAAAGGGCACCCGGCCTTCCGCCGCGGTGCCCTTTTCTTTTGGGGCCGCTCATCTTCCG GAAGGCCTCAGGGGCAGGTG
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSGARRIAALSQRYPRVWRKLEFSRRGQHAVVKFVSKLEERPMSEATESTTYIELAADIVSAYVSNNSVAAADLPNLINE VHAALQRVSKGESEPAPEPLKPAVPVKKSVTPDFIVCLEDGKKFKSLKRHLRTQYNMSPEQYREKWALPPDYPMVAPNYA AARSELAKQMGLGQQRRRRR
Sequences:
>Translated_180_residues MSGARRIAALSQRYPRVWRKLEFSRRGQHAVVKFVSKLEERPMSEATESTTYIELAADIVSAYVSNNSVAAADLPNLINE VHAALQRVSKGESEPAPEPLKPAVPVKKSVTPDFIVCLEDGKKFKSLKRHLRTQYNMSPEQYREKWALPPDYPMVAPNYA AARSELAKQMGLGQQRRRRR >Mature_179_residues SGARRIAALSQRYPRVWRKLEFSRRGQHAVVKFVSKLEERPMSEATESTTYIELAADIVSAYVSNNSVAAADLPNLINEV HAALQRVSKGESEPAPEPLKPAVPVKKSVTPDFIVCLEDGKKFKSLKRHLRTQYNMSPEQYREKWALPPDYPMVAPNYAA ARSELAKQMGLGQQRRRRR
Specific function: Unknown
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 20407; Mature: 20275
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGARRIAALSQRYPRVWRKLEFSRRGQHAVVKFVSKLEERPMSEATESTTYIELAADIV CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SAYVSNNSVAAADLPNLINEVHAALQRVSKGESEPAPEPLKPAVPVKKSVTPDFIVCLED HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC GKKFKSLKRHLRTQYNMSPEQYREKWALPPDYPMVAPNYAAARSELAKQMGLGQQRRRRR CHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure SGARRIAALSQRYPRVWRKLEFSRRGQHAVVKFVSKLEERPMSEATESTTYIELAADIV CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SAYVSNNSVAAADLPNLINEVHAALQRVSKGESEPAPEPLKPAVPVKKSVTPDFIVCLED HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC GKKFKSLKRHLRTQYNMSPEQYREKWALPPDYPMVAPNYAAARSELAKQMGLGQQRRRRR CHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9204561; 11481432 [H]