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The map label for this gene is msrB1 [H]

Identifier: 158422709

GI number: 158422709

Start: 1215638

End: 1216069

Strand: Reverse

Name: msrB1 [H]

Synonym: AZC_1085

Alternate gene names: 158422709

Gene position: 1216069-1215638 (Counterclockwise)

Preceding gene: 158422711

Following gene: 158422708

Centisome position: 22.65

GC content: 59.03

Gene sequence:

>432_bases
ATGACCCAAAAGGACTCCCCGGAGAAGATCGAACGTTCGGAGGAGGAGTGGCGCAACGCCCTCACCCCAGAACAATATCG
CGTGATGAGACAGCACGGCACCGAACGGGCCTTCACCGGTCCCTATTGGGACGAAAAACGGGCCGGTATCTACGAATGCG
CTGGTTGCGGAGCAGCATTGTTCAATTCGGAGACCAAATACGACTCCGGCAGCGGATGGCCCAGTTTCTACGCCCCCGTC
AGAGCAGACGCAGTCAAGAGTGTCGAAGATCGATCTCATGGCATGCATCGGGTGGAGATCCGATGCGCACGATGCGATGG
TCATCTCGGCCATGTCTTTCCGGATGGACCGCGGCCGACAGGCCTGCGTTTCTGCATGAACGGCACCGCACTGCACTTGT
CTCCCGCCGATGAGAACACACGTGACGCCTGA

Upstream 100 bases:

>100_bases
GCGCGGTTGGTTGCCGCCGGTTACCGCACACCTTGCCACGGCGCCCGCTGATGCCTACCTCTGAGCACAAGAATTTGCGC
CAATAAGTACAGAGGCGACC

Downstream 100 bases:

>100_bases
TCTTCCCGAGGCTCCCCGCCGTCCGACCGCCCGCACGCTGCACGGCGTCACGGTCCATGATGATTACGCCTGGTTGCGGG
CCGACAACTGGCGCGACGTC

Product: methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase 1 [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTQKDSPEKIERSEEEWRNALTPEQYRVMRQHGTERAFTGPYWDEKRAGIYECAGCGAALFNSETKYDSGSGWPSFYAPV
RADAVKSVEDRSHGMHRVEIRCARCDGHLGHVFPDGPRPTGLRFCMNGTALHLSPADENTRDA

Sequences:

>Translated_143_residues
MTQKDSPEKIERSEEEWRNALTPEQYRVMRQHGTERAFTGPYWDEKRAGIYECAGCGAALFNSETKYDSGSGWPSFYAPV
RADAVKSVEDRSHGMHRVEIRCARCDGHLGHVFPDGPRPTGLRFCMNGTALHLSPADENTRDA
>Mature_142_residues
TQKDSPEKIERSEEEWRNALTPEQYRVMRQHGTERAFTGPYWDEKRAGIYECAGCGAALFNSETKYDSGSGWPSFYAPVR
ADAVKSVEDRSHGMHRVEIRCARCDGHLGHVFPDGPRPTGLRFCMNGTALHLSPADENTRDA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=131, Percent_Identity=53.4351145038168, Blast_Score=158, Evalue=2e-39,
Organism=Homo sapiens, GI301336162, Length=131, Percent_Identity=53.4351145038168, Blast_Score=158, Evalue=2e-39,
Organism=Homo sapiens, GI73089054, Length=131, Percent_Identity=53.4351145038168, Blast_Score=158, Evalue=2e-39,
Organism=Homo sapiens, GI37620216, Length=131, Percent_Identity=53.4351145038168, Blast_Score=157, Evalue=3e-39,
Organism=Homo sapiens, GI117606353, Length=134, Percent_Identity=45.5223880597015, Blast_Score=125, Evalue=2e-29,
Organism=Homo sapiens, GI7706511, Length=95, Percent_Identity=36.8421052631579, Blast_Score=64, Evalue=5e-11,
Organism=Escherichia coli, GI1788077, Length=122, Percent_Identity=54.0983606557377, Blast_Score=151, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17553450, Length=139, Percent_Identity=43.8848920863309, Blast_Score=124, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI115532676, Length=139, Percent_Identity=43.8848920863309, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6319816, Length=129, Percent_Identity=42.6356589147287, Blast_Score=103, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24645799, Length=140, Percent_Identity=45.7142857142857, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI45553335, Length=134, Percent_Identity=47.0149253731343, Blast_Score=127, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21356369, Length=134, Percent_Identity=47.0149253731343, Blast_Score=127, Evalue=3e-30,
Organism=Drosophila melanogaster, GI221378662, Length=132, Percent_Identity=45.4545454545455, Blast_Score=126, Evalue=6e-30,
Organism=Drosophila melanogaster, GI221378664, Length=125, Percent_Identity=48.8, Blast_Score=125, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24645801, Length=151, Percent_Identity=42.3841059602649, Blast_Score=123, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24645804, Length=145, Percent_Identity=43.448275862069, Blast_Score=122, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16120; Mature: 15989

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKDSPEKIERSEEEWRNALTPEQYRVMRQHGTERAFTGPYWDEKRAGIYECAGCGAAL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHCCCCHHH
FNSETKYDSGSGWPSFYAPVRADAVKSVEDRSHGMHRVEIRCARCDGHLGHVFPDGPRPT
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCC
GLRFCMNGTALHLSPADENTRDA
CEEEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TQKDSPEKIERSEEEWRNALTPEQYRVMRQHGTERAFTGPYWDEKRAGIYECAGCGAAL
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHCCCCHHH
FNSETKYDSGSGWPSFYAPVRADAVKSVEDRSHGMHRVEIRCARCDGHLGHVFPDGPRPT
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCC
GLRFCMNGTALHLSPADENTRDA
CEEEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]