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The map label for this gene is trg [C]

Identifier: 158422702

GI number: 158422702

Start: 1205652

End: 1207856

Strand: Direct

Name: trg [C]

Synonym: AZC_1078

Alternate gene names: 158422702

Gene position: 1205652-1207856 (Clockwise)

Preceding gene: 158422701

Following gene: 158422707

Centisome position: 22.45

GC content: 66.98

Gene sequence:

>2205_bases
TTGTTCTTATGGAATAATGTGCGGGTCCTCAGGATTTGCGCGGCCGTCGTGCGGACGGTGCGCGCATCGGGCGATCCGTC
TTCTTGCGTGGGGATGGATATGAGCTTCGCCAGCCGGTTGTCGATCAAGTGGTCGCTGGGCCTTTTCCTCGGTGTTCTGG
GCGTCATCGTCTTCATCTATGCGGGCATTGATCTTGCCGGCGCGCTGAAGCGGCAGGCGGCCTCCGAGCGGGTGCTGACG
CTGGCGCAGGCCAGCCGCACGGCGCTGAAGACCCTGCTCGGCACGCGCCTCGAACGCGGCTCGCTCAACATCGCGCTCTC
CGGCGAAGGCCCGGCGGATGCCGCCATCACCGGCAATATCGCCAATTATCGCAAGACGGTGGAGGCCGGATACGGGGCGC
TCGTCGCTTCCATCGAGGCCGCCGGCATCGCCAAGCCCATCTCGACGCTTCCGGCGCTGAAGCAGGCGCATGACGCCATG
GTGGCGCTCCAGTCGCGTCTCGATGCGGATGCCGGGCGGCCGAAGTCCGCCCGCGATCCGCAGTCGCACGGGGCGTCGCA
GACCACCTACCAGAATTTCCTCAATGCCCTGACAGCGACCACCGACGCGGTGGACGCCTCCATCTTGAATGCGGACAAGG
GCGTGGACCGCTATCTGGCGGTCAAGCGCGCGGCCTGGGCGGCACGGGCACAGTATGGCGCGGCGCTTGTGCGACTGGAG
ACGGTGGTGGCGGCCAATCGCGGCTTCACCCCGGTTGAGGCGGGTCTCGCCTTCGAGGAGCGGGGCAAGACGGCCAGTTT
CTGGAGCGTGCTTCAGGATGCGGTGAATGCTGATGACATGGCCCCCGCGGTGCGTGAGGCTTTCAACAAGGCAAACACAG
CTGCCTTCACCGGGCAGGTCTGGGAAGACACCAAGGCCGCCTACGACACGCTGGCCGCCGGCAAGCCGCTGCCCATCGCC
GCGAAGGACCTTCAGGTGCAAAACACGTTGAAGGCCGGGCTGGTGGTGGAGGTGGCCAATGTCGCGCTCGACCAACTGGT
ACAGAGGGCGGAGGCCGTGGTCTCGGAATCCCGCGCCGACTTCTTCCTGTCGCTCGCTTGTCTCATCGGCTCGGCGCTCA
TCGTCGTCGCCGGCCTTGCCTTCACCCTCCTGCGCGTGACGCGGCCGATCCAGAAGCTCAACGACACCATGCGCAGCCTT
GCCGATGGCGATACCGAAGCCGAGGTGGGGAGCCTCGATCGCGGCGACGAGATCGGCGAGATGGCCCGCGCCGTGCAGTT
CTTCAAGGAGAACCTCCAGCGCAACAAGGAACTGGAGGAGGATGCGAAGCGCATCGCCCGCGAGGCGGAAGAGGCGCGCC
GCGCCGGCATGCTGAAGCTTGCGGATGATCTCGAGCGCTCGGTGGGCGCCATCGTCGCCGCCGTCTCCTCGTCCGCGACA
CAGATGGAGGCGACGGCGCAGGCCATGTCCTATTCCGCGTCCACCACGCTGTCCCAGTCCACCTCGGTCTCTTCGGCGGC
GACGCAGGCCTCCGCCAATGTGGCGGCGGTGGCGGGCGCGACGGAGGAGCTGGGCTCCTCGGTGAGCGAGATCGGCCGCC
AGGTCGAGCATTCGGTCAACAAGGCGCAGTCGGCGGTGACGGAGGCGGAGAACGCCAGCGGCGTCATCATGGAGCTCAAT
CAGGCGGCGGCGCGCATCAGCACCATCGTCGATCTCATCTCGCAGATCGCCGGCCAGACGAATCTTCTTGCCCTCAATGC
CACCATCGAGGCGGCACGCGCGGGCGATGCGGGCAAGGGCTTCGCCGTCGTCGCCTCCGAGGTGAAGGGCCTCGCGGAGC
AGACGTCAAAGGCCACGACGGAGATCGCGCAGCAGGTGGCGAGCATCCAGGGCACCACCAATCAGGCGGTGGCGGCCATT
GACCACGTGATGAACACCATCCGCGACATCAACACGGCGGCCCGGCAGATCTCCACCACGGTGGAGCAGCAGTCGCAGGC
CACCATGGAGATCGTGCAGAACATCAGCCAGGCGTCCGTGGGCGCGAACGAGGTGAACTCCATCATCACCAGCGTGGCGC
AGGCGGCGGGCGAGACGGGCGATGGCGCGCGGCAGGTGCTGGACGTGTCCTCGGAACTGGCCGGGCGCGCCGCTTCGCTC
CAGAGCCAGATGAAGAGCTTCCTCGCCACCATCCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
CTATCGCATCTGAGCTGGCGAGGTGCAGCGCATTCGTCAGTCGTGCTGATAGTATTGCGGTTCGATACCTCCATTTACAT
CAGGTTCGCGCAAGCCAGCG

Downstream 100 bases:

>100_bases
GCGTCAGACCGTCGGAATAACGAAAAGGCCGGGCGGGCTGGCTGAACCCGCCCGGCCTTTCGTCGTTCAGGGCGTGAGCG
TCGCCAGGGCAGGATCGCGG

Product: histidine kinase

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MFLWNNVRVLRICAAVVRTVRASGDPSSCVGMDMSFASRLSIKWSLGLFLGVLGVIVFIYAGIDLAGALKRQAASERVLT
LAQASRTALKTLLGTRLERGSLNIALSGEGPADAAITGNIANYRKTVEAGYGALVASIEAAGIAKPISTLPALKQAHDAM
VALQSRLDADAGRPKSARDPQSHGASQTTYQNFLNALTATTDAVDASILNADKGVDRYLAVKRAAWAARAQYGAALVRLE
TVVAANRGFTPVEAGLAFEERGKTASFWSVLQDAVNADDMAPAVREAFNKANTAAFTGQVWEDTKAAYDTLAAGKPLPIA
AKDLQVQNTLKAGLVVEVANVALDQLVQRAEAVVSESRADFFLSLACLIGSALIVVAGLAFTLLRVTRPIQKLNDTMRSL
ADGDTEAEVGSLDRGDEIGEMARAVQFFKENLQRNKELEEDAKRIAREAEEARRAGMLKLADDLERSVGAIVAAVSSSAT
QMEATAQAMSYSASTTLSQSTSVSSAATQASANVAAVAGATEELGSSVSEIGRQVEHSVNKAQSAVTEAENASGVIMELN
QAAARISTIVDLISQIAGQTNLLALNATIEAARAGDAGKGFAVVASEVKGLAEQTSKATTEIAQQVASIQGTTNQAVAAI
DHVMNTIRDINTAARQISTTVEQQSQATMEIVQNISQASVGANEVNSIITSVAQAAGETGDGARQVLDVSSELAGRAASL
QSQMKSFLATIRAA

Sequences:

>Translated_734_residues
MFLWNNVRVLRICAAVVRTVRASGDPSSCVGMDMSFASRLSIKWSLGLFLGVLGVIVFIYAGIDLAGALKRQAASERVLT
LAQASRTALKTLLGTRLERGSLNIALSGEGPADAAITGNIANYRKTVEAGYGALVASIEAAGIAKPISTLPALKQAHDAM
VALQSRLDADAGRPKSARDPQSHGASQTTYQNFLNALTATTDAVDASILNADKGVDRYLAVKRAAWAARAQYGAALVRLE
TVVAANRGFTPVEAGLAFEERGKTASFWSVLQDAVNADDMAPAVREAFNKANTAAFTGQVWEDTKAAYDTLAAGKPLPIA
AKDLQVQNTLKAGLVVEVANVALDQLVQRAEAVVSESRADFFLSLACLIGSALIVVAGLAFTLLRVTRPIQKLNDTMRSL
ADGDTEAEVGSLDRGDEIGEMARAVQFFKENLQRNKELEEDAKRIAREAEEARRAGMLKLADDLERSVGAIVAAVSSSAT
QMEATAQAMSYSASTTLSQSTSVSSAATQASANVAAVAGATEELGSSVSEIGRQVEHSVNKAQSAVTEAENASGVIMELN
QAAARISTIVDLISQIAGQTNLLALNATIEAARAGDAGKGFAVVASEVKGLAEQTSKATTEIAQQVASIQGTTNQAVAAI
DHVMNTIRDINTAARQISTTVEQQSQATMEIVQNISQASVGANEVNSIITSVAQAAGETGDGARQVLDVSSELAGRAASL
QSQMKSFLATIRAA
>Mature_734_residues
MFLWNNVRVLRICAAVVRTVRASGDPSSCVGMDMSFASRLSIKWSLGLFLGVLGVIVFIYAGIDLAGALKRQAASERVLT
LAQASRTALKTLLGTRLERGSLNIALSGEGPADAAITGNIANYRKTVEAGYGALVASIEAAGIAKPISTLPALKQAHDAM
VALQSRLDADAGRPKSARDPQSHGASQTTYQNFLNALTATTDAVDASILNADKGVDRYLAVKRAAWAARAQYGAALVRLE
TVVAANRGFTPVEAGLAFEERGKTASFWSVLQDAVNADDMAPAVREAFNKANTAAFTGQVWEDTKAAYDTLAAGKPLPIA
AKDLQVQNTLKAGLVVEVANVALDQLVQRAEAVVSESRADFFLSLACLIGSALIVVAGLAFTLLRVTRPIQKLNDTMRSL
ADGDTEAEVGSLDRGDEIGEMARAVQFFKENLQRNKELEEDAKRIAREAEEARRAGMLKLADDLERSVGAIVAAVSSSAT
QMEATAQAMSYSASTTLSQSTSVSSAATQASANVAAVAGATEELGSSVSEIGRQVEHSVNKAQSAVTEAENASGVIMELN
QAAARISTIVDLISQIAGQTNLLALNATIEAARAGDAGKGFAVVASEVKGLAEQTSKATTEIAQQVASIQGTTNQAVAAI
DHVMNTIRDINTAARQISTTVEQQSQATMEIVQNISQASVGANEVNSIITSVAQAAGETGDGARQVLDVSSELAGRAASL
QSQMKSFLATIRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=360, Percent_Identity=28.3333333333333, Blast_Score=92, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=488, Percent_Identity=25.8196721311475, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI2367378, Length=347, Percent_Identity=24.4956772334294, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1788194, Length=207, Percent_Identity=30.9178743961353, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788195, Length=233, Percent_Identity=26.6094420600858, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 76629; Mature: 76629

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLWNNVRVLRICAAVVRTVRASGDPSSCVGMDMSFASRLSIKWSLGLFLGVLGVIVFIY
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDLAGALKRQAASERVLTLAQASRTALKTLLGTRLERGSLNIALSGEGPADAAITGNI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCH
ANYRKTVEAGYGALVASIEAAGIAKPISTLPALKQAHDAMVALQSRLDADAGRPKSARDP
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QSHGASQTTYQNFLNALTATTDAVDASILNADKGVDRYLAVKRAAWAARAQYGAALVRLE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVVAANRGFTPVEAGLAFEERGKTASFWSVLQDAVNADDMAPAVREAFNKANTAAFTGQV
HHHHHCCCCCCHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCHH
WEDTKAAYDTLAAGKPLPIAAKDLQVQNTLKAGLVVEVANVALDQLVQRAEAVVSESRAD
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLSLACLIGSALIVVAGLAFTLLRVTRPIQKLNDTMRSLADGDTEAEVGSLDRGDEIGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHH
MARAVQFFKENLQRNKELEEDAKRIAREAEEARRAGMLKLADDLERSVGAIVAAVSSSAT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
QMEATAQAMSYSASTTLSQSTSVSSAATQASANVAAVAGATEELGSSVSEIGRQVEHSVN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
KAQSAVTEAENASGVIMELNQAAARISTIVDLISQIAGQTNLLALNATIEAARAGDAGKG
HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCC
FAVVASEVKGLAEQTSKATTEIAQQVASIQGTTNQAVAAIDHVMNTIRDINTAARQISTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQQSQATMEIVQNISQASVGANEVNSIITSVAQAAGETGDGARQVLDVSSELAGRAASL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QSQMKSFLATIRAA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MFLWNNVRVLRICAAVVRTVRASGDPSSCVGMDMSFASRLSIKWSLGLFLGVLGVIVFIY
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDLAGALKRQAASERVLTLAQASRTALKTLLGTRLERGSLNIALSGEGPADAAITGNI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCH
ANYRKTVEAGYGALVASIEAAGIAKPISTLPALKQAHDAMVALQSRLDADAGRPKSARDP
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QSHGASQTTYQNFLNALTATTDAVDASILNADKGVDRYLAVKRAAWAARAQYGAALVRLE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TVVAANRGFTPVEAGLAFEERGKTASFWSVLQDAVNADDMAPAVREAFNKANTAAFTGQV
HHHHHCCCCCCHHHCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCHH
WEDTKAAYDTLAAGKPLPIAAKDLQVQNTLKAGLVVEVANVALDQLVQRAEAVVSESRAD
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLSLACLIGSALIVVAGLAFTLLRVTRPIQKLNDTMRSLADGDTEAEVGSLDRGDEIGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHH
MARAVQFFKENLQRNKELEEDAKRIAREAEEARRAGMLKLADDLERSVGAIVAAVSSSAT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
QMEATAQAMSYSASTTLSQSTSVSSAATQASANVAAVAGATEELGSSVSEIGRQVEHSVN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
KAQSAVTEAENASGVIMELNQAAARISTIVDLISQIAGQTNLLALNATIEAARAGDAGKG
HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCC
FAVVASEVKGLAEQTSKATTEIAQQVASIQGTTNQAVAAIDHVMNTIRDINTAARQISTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQQSQATMEIVQNISQASVGANEVNSIITSVAQAAGETGDGARQVLDVSSELAGRAASL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
QSQMKSFLATIRAA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]