| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422659
Identifier: 158422659
GI number: 158422659
Start: 1162529
End: 1162993
Strand: Reverse
Name: 158422659
Synonym: AZC_1035
Alternate gene names: NA
Gene position: 1162993-1162529 (Counterclockwise)
Preceding gene: 158422660
Following gene: 158422658
Centisome position: 21.66
GC content: 61.94
Gene sequence:
>465_bases ATGGCCGATACGCTGGAACTTGAAGCCAATCCCGCCGAAGCCCCCTTCATCAAGGAATTGATCAAGGTGTGGCGTGCCCA GGACAGCCACGGCGCCTGGGACAGCAAGGGCGATCTCGATCTTCTGGAGCCCTATATTCTCGATAAGGAGAAGCGCCGGG CCCTGCCCATCGTGGGCGATCCGGACCCGGAGACGCTGTGGCGGCTGGAGCTCTATTACAACGCCATCTGCCTCTCCATC GAGAAGGCGACCGGCGTCATGATCACGCCCATGATGAAGATGAGCCACGAGGGCTTCGGCCGCATGGTGCTCATCGGCGG CCGCCTGATCGTGGTCAACAAGCAGCTGCGCGACGTGCACCGCTTCGGTTTCGACAGCCTCGCCAAGCTCGCCGAGGAAG GCGCCAAGCAGGTGCAGGCCGGCATCGACATGATCACCAAGTTCGAGGCTGTGGCACGTTACTGA
Upstream 100 bases:
>100_bases GCTGGAAGGCGTGCTCAAGGGCGCCCCGCCCCCCTGGCTGCGCAAGGCCCTCGCCAAGGGCCAGGAACGCAGCTTCGACT TCGACGAGTGAGGACGACCC
Downstream 100 bases:
>100_bases GCGACACCGCATCTATGTAAGCGGCGGAGAGCCCTCTCCCGCTTGCGGGGGAGGGTTGGGGGGGGCGACGGCCGAAGGCC GGCAGCGCGGCCTTTGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MADTLELEANPAEAPFIKELIKVWRAQDSHGAWDSKGDLDLLEPYILDKEKRRALPIVGDPDPETLWRLELYYNAICLSI EKATGVMITPMMKMSHEGFGRMVLIGGRLIVVNKQLRDVHRFGFDSLAKLAEEGAKQVQAGIDMITKFEAVARY
Sequences:
>Translated_154_residues MADTLELEANPAEAPFIKELIKVWRAQDSHGAWDSKGDLDLLEPYILDKEKRRALPIVGDPDPETLWRLELYYNAICLSI EKATGVMITPMMKMSHEGFGRMVLIGGRLIVVNKQLRDVHRFGFDSLAKLAEEGAKQVQAGIDMITKFEAVARY >Mature_153_residues ADTLELEANPAEAPFIKELIKVWRAQDSHGAWDSKGDLDLLEPYILDKEKRRALPIVGDPDPETLWRLELYYNAICLSIE KATGVMITPMMKMSHEGFGRMVLIGGRLIVVNKQLRDVHRFGFDSLAKLAEEGAKQVQAGIDMITKFEAVARY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0460 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004952 [H]
Pfam domain/function: PF03270 DUF269 [H]
EC number: NA
Molecular weight: Translated: 17388; Mature: 17257
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTLELEANPAEAPFIKELIKVWRAQDSHGAWDSKGDLDLLEPYILDKEKRRALPIVGD CCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCC PDPETLWRLELYYNAICLSIEKATGVMITPMMKMSHEGFGRMVLIGGRLIVVNKQLRDVH CCHHHHHHHHHHHHHHHEEEECCCCEEEEHHHHHCCCCCCEEEEECCEEEEECHHHHHHH RFGFDSLAKLAEEGAKQVQAGIDMITKFEAVARY HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADTLELEANPAEAPFIKELIKVWRAQDSHGAWDSKGDLDLLEPYILDKEKRRALPIVGD CCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCC PDPETLWRLELYYNAICLSIEKATGVMITPMMKMSHEGFGRMVLIGGRLIVVNKQLRDVH CCHHHHHHHHHHHHHHHEEEECCCCEEEEHHHHHCCCCCCEEEEECCEEEEECHHHHHHH RFGFDSLAKLAEEGAKQVQAGIDMITKFEAVARY HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2747620; 2708314 [H]