| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422602
Identifier: 158422602
GI number: 158422602
Start: 1088147
End: 1088935
Strand: Reverse
Name: 158422602
Synonym: AZC_0978
Alternate gene names: NA
Gene position: 1088935-1088147 (Counterclockwise)
Preceding gene: 158422603
Following gene: 158422599
Centisome position: 20.28
GC content: 68.82
Gene sequence:
>789_bases GTGAGGGCCGGCTCAAGGCCTGCCGGCAGAGCATCAGAACCAGCGGGACGGAACAGAATGACGGAGCATACGGGCGAGGC GGCTCGGCTGCCCTCTGGAGCGGTGTTCCCGCAGGAGCGCATCCGGGCCGCATTGAACTTCGGCAACGTGCTGTTCACCA CGCAGGATGACGCGGGCGCGCCTGTGGGCCTCGGACCGGACCTCATGCACGCGCTCGCGGACCATTTCGGCCTCGGGCTC GACATCCGCTCCTATGCCCAGCCGCCGGATGTGGTGGCGGATGCCAATACGGATGCGTGGGACGTCACCATTCTGGCCAT CGAGCCGGCGCGCGAGGCATTCGTTGCCTTTGCCGCGCCGATGACGCGGATCGAGGCCACCTGCGTGGTGGACGCCGCCT ACACCGAGACCTCTCTGGCGGAACTGGATCGGCCCGGCTTCCGCCTCGCCGCCATGGATCGCAGCGGCTACGAGCTTTAC CTCAGCCGGACGCTGAAAGCGGCCACCCTCGTCAAGACCGCCTCGTTCGCCGAATCCATCGCGCGCTTCAACGCCGGGGA AGCGGATGCCGTGGCGGGCCTCGCCACCATGCTCGCCGGGCGGCTGCCGGACATGCCCCGCGGGCGCTTGATGCCGCACA GCTTCCAAACCATCCACCATGGCTTCGCAGTGCCGCACGCTCTGGCGCCCCTGCTGCCGGCGATCAATGCCTTCGTGGCG CAGAGCGCCGCTTCGGTGATCACGCAGGCCGTCTCCCGCCACGGCATTGTCGGGCTGACGCCCGCCTGA
Upstream 100 bases:
>100_bases GCACGCTGCACCCGCGCTATGACGCGACGCTGGAGAGTTTCGAGCCCGCGCACATGCAGGCGCCGACGGCGCAGGGCGAG ACCAAGGCCGCCAAGGCGGA
Downstream 100 bases:
>100_bases GCGACGGGCCTCAGCCGGCCAGCGCGCTCGCCTCGAAGTCGCGCACGAACGCGGCGACCCGCCGGTCCACCTTGATGTCC GAGGGCCGGATGGGCCGCAC
Product: amino acid ABC transporter periplasmic ligand binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MRAGSRPAGRASEPAGRNRMTEHTGEAARLPSGAVFPQERIRAALNFGNVLFTTQDDAGAPVGLGPDLMHALADHFGLGL DIRSYAQPPDVVADANTDAWDVTILAIEPAREAFVAFAAPMTRIEATCVVDAAYTETSLAELDRPGFRLAAMDRSGYELY LSRTLKAATLVKTASFAESIARFNAGEADAVAGLATMLAGRLPDMPRGRLMPHSFQTIHHGFAVPHALAPLLPAINAFVA QSAASVITQAVSRHGIVGLTPA
Sequences:
>Translated_262_residues MRAGSRPAGRASEPAGRNRMTEHTGEAARLPSGAVFPQERIRAALNFGNVLFTTQDDAGAPVGLGPDLMHALADHFGLGL DIRSYAQPPDVVADANTDAWDVTILAIEPAREAFVAFAAPMTRIEATCVVDAAYTETSLAELDRPGFRLAAMDRSGYELY LSRTLKAATLVKTASFAESIARFNAGEADAVAGLATMLAGRLPDMPRGRLMPHSFQTIHHGFAVPHALAPLLPAINAFVA QSAASVITQAVSRHGIVGLTPA >Mature_262_residues MRAGSRPAGRASEPAGRNRMTEHTGEAARLPSGAVFPQERIRAALNFGNVLFTTQDDAGAPVGLGPDLMHALADHFGLGL DIRSYAQPPDVVADANTDAWDVTILAIEPAREAFVAFAAPMTRIEATCVVDAAYTETSLAELDRPGFRLAAMDRSGYELY LSRTLKAATLVKTASFAESIARFNAGEADAVAGLATMLAGRLPDMPRGRLMPHSFQTIHHGFAVPHALAPLLPAINAFVA QSAASVITQAVSRHGIVGLTPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27595; Mature: 27595
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGSRPAGRASEPAGRNRMTEHTGEAARLPSGAVFPQERIRAALNFGNVLFTTQDDAGA CCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC PVGLGPDLMHALADHFGLGLDIRSYAQPPDVVADANTDAWDVTILAIEPAREAFVAFAAP CCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCEECCCCCCEEEEEEEECCHHHHHHHHHHH MTRIEATCVVDAAYTETSLAELDRPGFRLAAMDRSGYELYLSRTLKAATLVKTASFAESI HHHHEEEEEEECHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHH ARFNAGEADAVAGLATMLAGRLPDMPRGRLMPHSFQTIHHGFAVPHALAPLLPAINAFVA HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAASVITQAVSRHGIVGLTPA HHHHHHHHHHHHHCCCEECCCC >Mature Secondary Structure MRAGSRPAGRASEPAGRNRMTEHTGEAARLPSGAVFPQERIRAALNFGNVLFTTQDDAGA CCCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC PVGLGPDLMHALADHFGLGLDIRSYAQPPDVVADANTDAWDVTILAIEPAREAFVAFAAP CCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCEECCCCCCEEEEEEEECCHHHHHHHHHHH MTRIEATCVVDAAYTETSLAELDRPGFRLAAMDRSGYELYLSRTLKAATLVKTASFAESI HHHHEEEEEEECHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHH ARFNAGEADAVAGLATMLAGRLPDMPRGRLMPHSFQTIHHGFAVPHALAPLLPAINAFVA HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QSAASVITQAVSRHGIVGLTPA HHHHHHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA