| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ywrB [H]
Identifier: 158422593
GI number: 158422593
Start: 1080081
End: 1080686
Strand: Direct
Name: ywrB [H]
Synonym: AZC_0969
Alternate gene names: 158422593
Gene position: 1080081-1080686 (Clockwise)
Preceding gene: 158422592
Following gene: 158422594
Centisome position: 20.11
GC content: 67.82
Gene sequence:
>606_bases GTGCTCACCATCTTTCTCGTCTTCCTCTCCATCGGGGCGACGAGCTTCGGCGGCGGTGTCGTGGCCTATCTGCGTTCCGC GCTGGTGGGTCGTCACCGCTGGGTGGATGACGAGACCTTCCTCGAACTCCTGTCCATCTGCCAGAGCCTGCCGGGGCTCA ATGCCTCCAACATGGCGATCCTGGTGGGCGACCGGCTGAAGGGCACGGCGGGGGCCGCCGCCGCGCTGGTGGGCATCTGC CTGCCCGGCGGCATCATGATGGTCGCCGCCGCGCTTCTCTACAGCACCAACGAGAGCAAGGGCGGCGTCGTGAACGCCAT GCTGCACGGCGTCTCCGCGGCGGCGGTGGGCATGGTGCTGGCGGTCTCCGTCCAGCTCGGCCTCAAGACGCTGAAGCGTT ATGCGGATCTGGTGTTCGTCGCCCTCACCATCATCGGCGTCGAGGTGCTGCACCAGTCGGTGCTCGTGGTGCTGGCGGTG GTCGGGGCTCTCGCGATCATCTGGTACCGGCCCGGCGGTGCGCCGCACGGGGGCGATCTGTTCGACCGCTTCACCAAGCC CAAGCCGAAGCCGCACCACGACCTCGATCACCACGGAGGCGTGTGA
Upstream 100 bases:
>100_bases GGTGCCGTGTACCGGCTGAAGGGCGCGCCCCCGCATTCCCATGAGTGACGTTCTGTCCGACGGCGCACCCTGCGAGGAAA CCATCGTCCCGCAGCCGAGC
Downstream 100 bases:
>100_bases TGGGCCAATTGCTCCCGCTCGTCGCGGTCTTCTCCTATCTGTCCCTGCTCACCGTGGGCGGCGGCATGGCCGCCTTTCCG GAACTCAAATACCTGACGGT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MLTIFLVFLSIGATSFGGGVVAYLRSALVGRHRWVDDETFLELLSICQSLPGLNASNMAILVGDRLKGTAGAAAALVGIC LPGGIMMVAAALLYSTNESKGGVVNAMLHGVSAAAVGMVLAVSVQLGLKTLKRYADLVFVALTIIGVEVLHQSVLVVLAV VGALAIIWYRPGGAPHGGDLFDRFTKPKPKPHHDLDHHGGV
Sequences:
>Translated_201_residues MLTIFLVFLSIGATSFGGGVVAYLRSALVGRHRWVDDETFLELLSICQSLPGLNASNMAILVGDRLKGTAGAAAALVGIC LPGGIMMVAAALLYSTNESKGGVVNAMLHGVSAAAVGMVLAVSVQLGLKTLKRYADLVFVALTIIGVEVLHQSVLVVLAV VGALAIIWYRPGGAPHGGDLFDRFTKPKPKPHHDLDHHGGV >Mature_201_residues MLTIFLVFLSIGATSFGGGVVAYLRSALVGRHRWVDDETFLELLSICQSLPGLNASNMAILVGDRLKGTAGAAAALVGIC LPGGIMMVAAALLYSTNESKGGVVNAMLHGVSAAAVGMVLAVSVQLGLKTLKRYADLVFVALTIIGVEVLHQSVLVVLAV VGALAIIWYRPGGAPHGGDLFDRFTKPKPKPHHDLDHHGGV
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20903; Mature: 20903
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIFLVFLSIGATSFGGGVVAYLRSALVGRHRWVDDETFLELLSICQSLPGLNASNMAI CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE LVGDRLKGTAGAAAALVGICLPGGIMMVAAALLYSTNESKGGVVNAMLHGVSAAAVGMVL EECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AVSVQLGLKTLKRYADLVFVALTIIGVEVLHQSVLVVLAVVGALAIIWYRPGGAPHGGDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH FDRFTKPKPKPHHDLDHHGGV HHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTIFLVFLSIGATSFGGGVVAYLRSALVGRHRWVDDETFLELLSICQSLPGLNASNMAI CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEE LVGDRLKGTAGAAAALVGICLPGGIMMVAAALLYSTNESKGGVVNAMLHGVSAAAVGMVL EECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AVSVQLGLKTLKRYADLVFVALTIIGVEVLHQSVLVVLAVVGALAIIWYRPGGAPHGGDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH FDRFTKPKPKPHHDLDHHGGV HHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]