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The map label for this gene is 158422584

Identifier: 158422584

GI number: 158422584

Start: 1072448

End: 1072870

Strand: Direct

Name: 158422584

Synonym: AZC_0960

Alternate gene names: NA

Gene position: 1072448-1072870 (Clockwise)

Preceding gene: 158422578

Following gene: 158422585

Centisome position: 19.97

GC content: 68.56

Gene sequence:

>423_bases
ATGCGGGATGGGAAAAGGCGGTCCGGTTGGCGTGAATGGCATGCCGGAGCCGTGGTGGCGGTGGTGATGGCAGGTCTCGG
CGCCCCGGCGGCGCTGGCGCAGATGGCGCTGCCGACGCAGGCGCCCCTCACCGGGGCGGAGCTCTTCAAACGCCAGTGTG
GCACCTGCCACACCACCAATGCGGCGGACCAGCCCCGGCAGGGGCCCACGCTGGCCGGGGTGTTCGGCCGCAAGGCGGGA
TCGGTGGAAGGGTTCCGCTATTCGCCGGGCTTCGCCAAGGCGGATTTCAGCTGGGACGAGGCGCATCTCGATGCCTGGCT
CACCAATCCGCAGGCGGTGATTCCCGGCGCGATCATGCCCTACCGCCAGCCCAAGCCGGACCTGAGGGCCGCTTTGATCG
GCTATCTGAAGGAGTTGAAGTGA

Upstream 100 bases:

>100_bases
GCCTGCCGTCCGGCGGTGCCTAACAGCCCGCTACTACCACGCCCCCGCCGGCCTCTCCCTATAATCGCTCCAGAAAAACA
GAAACGGAGTCGGGAGCGAG

Downstream 100 bases:

>100_bases
TGGCCAAGCCCGTTCATGTCATGCTGCGCGTCCTCGATGAAGCGCGCGCGGTCGCCTTCTACGAGACCGCTTTCGGCCTG
AAGGTCGCGGACCGATTCGA

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRDGKRRSGWREWHAGAVVAVVMAGLGAPAALAQMALPTQAPLTGAELFKRQCGTCHTTNAADQPRQGPTLAGVFGRKAG
SVEGFRYSPGFAKADFSWDEAHLDAWLTNPQAVIPGAIMPYRQPKPDLRAALIGYLKELK

Sequences:

>Translated_140_residues
MRDGKRRSGWREWHAGAVVAVVMAGLGAPAALAQMALPTQAPLTGAELFKRQCGTCHTTNAADQPRQGPTLAGVFGRKAG
SVEGFRYSPGFAKADFSWDEAHLDAWLTNPQAVIPGAIMPYRQPKPDLRAALIGYLKELK
>Mature_140_residues
MRDGKRRSGWREWHAGAVVAVVMAGLGAPAALAQMALPTQAPLTGAELFKRQCGTCHTTNAADQPRQGPTLAGVFGRKAG
SVEGFRYSPGFAKADFSWDEAHLDAWLTNPQAVIPGAIMPYRQPKPDLRAALIGYLKELK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=95, Percent_Identity=36.8421052631579, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17566554, Length=103, Percent_Identity=37.8640776699029, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322508, Length=95, Percent_Identity=41.0526315789474, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320796, Length=93, Percent_Identity=38.7096774193548, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17137204, Length=98, Percent_Identity=36.734693877551, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI17137228, Length=104, Percent_Identity=37.5, Blast_Score=76, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15057; Mature: 15057

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDGKRRSGWREWHAGAVVAVVMAGLGAPAALAQMALPTQAPLTGAELFKRQCGTCHTTN
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCC
AADQPRQGPTLAGVFGRKAGSVEGFRYSPGFAKADFSWDEAHLDAWLTNPQAVIPGAIMP
CCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
YRQPKPDLRAALIGYLKELK
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDGKRRSGWREWHAGAVVAVVMAGLGAPAALAQMALPTQAPLTGAELFKRQCGTCHTTN
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCC
AADQPRQGPTLAGVFGRKAGSVEGFRYSPGFAKADFSWDEAHLDAWLTNPQAVIPGAIMP
CCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
YRQPKPDLRAALIGYLKELK
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]