Click here to switch to the map view.

The map label for this gene is perM [C]

Identifier: 158422562

GI number: 158422562

Start: 1049199

End: 1050293

Strand: Direct

Name: perM [C]

Synonym: AZC_0938

Alternate gene names: 158422562

Gene position: 1049199-1050293 (Clockwise)

Preceding gene: 158422561

Following gene: 158422563

Centisome position: 19.54

GC content: 63.38

Gene sequence:

>1095_bases
ATGAAGCTGCAGCTGCAGTTCCGCTTCTGGATCGGGACGCTCGTCGTCCTCATCCTCGCCATGTGGGTGCTGCGCGAGAT
CCTGCTGCCCTTCGTCGTCGGGACGGCGATCGCCTATTTCCTCAATCCTCTGGTGGAGCGCCTGAGCCGGCTGGGGATCG
GGCGCATGCCCGCCGCCCTCTTCATGATCGGCCTGCTGCTGCTGGTCGTGGTGGTGCTGCTGCTCGTGGTGCTGCCCATC
ATGTCCGGCCAACTTTATGAGTTCATCCAGAACATGCCGAGCTATGTCACCCGCCTCCAGCGGCTGGTGACGGAGGAGAA
CAAGGAGTGGGTGGACCAGATCTTCGGCACCCGCCTGCCCGATATCCAGAAATCCCTCTCCGACCTGATGTCGCAGGGCG
TGAGCTATCTCCTGGGCCTGCTGTCCTCGCTGTGGTCCGGCGGGCAGGCGCTGCTGTCGGTCTTCGCGCTGGTCGTGGTG
ACGCCGGTGGTCGCCTTCTACGTGCTGTGCGACTGGAACAGCATGGTGGAAAACGTGGATTCCTGGATCCCCGTCCACCA
GCGTCCAGTGGTGCGCCGGCTCGGCCGGGAAATGGACATGGCGGTGGCCGGATTCGTGCGCGGGCAAGCGCTCGTGTGCC
TTCTGCTCGGGTCCTATTATGCCATTGCGCTGAGCATGGCCGGCCTCAACTTCGGCCTCATCATCGGGATTGTCTCCGGC
TTCATCACCTTTATTCCGTACGTGGGCTCGCTCACCGGCCTCGTGCTGGCCATGGGCGTCGCCATCGTTCAGTTCTTTCC
TGATTGGGCCATGATCGGCACCGTCTTCGGCATCTTCATCGTCGGCCAGACCATCGAGGGCTATATCCTCTCGCCCAAGC
TCGTGGGCGACAGCATCGGCGTGCATCCGGTATGGCTGATGTTCGCGCTGTTCGCCTTCGGCTATCTGTTCGGCTTCGTC
GGCCTTCTCCTGGCCGTGCCGCTCACCGCCGCCACCGGTGTGCTGGTCCGCTTTGCCTTCCGGCAGTATTTTCACAGCAC
GCTCTATACCGGCCTGCCAGAGGCGGCCGAGGAGCGGGTGGCCGACAAGGTCTGA

Upstream 100 bases:

>100_bases
CATGGATGCGCCACATGGCGCGGTGAGCCGCCTTCCGCCTTCCGCTTGCGACCGGGCCGGGGAAGCGCCGTCGCCATGCG
GGGAAGGGGACAGGCCGGCC

Downstream 100 bases:

>100_bases
GCATGTCCCCCCGCGATACCCGTCCCCGGCAGCTTCCGCTGGATCTGCCGGCCACCTCGGCCATGCAGCGCGAGGATTTT
CTCGAGGCGCCGGGCAATGC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKLQLQFRFWIGTLVVLILAMWVLREILLPFVVGTAIAYFLNPLVERLSRLGIGRMPAALFMIGLLLLVVVVLLLVVLPI
MSGQLYEFIQNMPSYVTRLQRLVTEENKEWVDQIFGTRLPDIQKSLSDLMSQGVSYLLGLLSSLWSGGQALLSVFALVVV
TPVVAFYVLCDWNSMVENVDSWIPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSG
FITFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIGVHPVWLMFALFAFGYLFGFV
GLLLAVPLTAATGVLVRFAFRQYFHSTLYTGLPEAAEERVADKV

Sequences:

>Translated_364_residues
MKLQLQFRFWIGTLVVLILAMWVLREILLPFVVGTAIAYFLNPLVERLSRLGIGRMPAALFMIGLLLLVVVVLLLVVLPI
MSGQLYEFIQNMPSYVTRLQRLVTEENKEWVDQIFGTRLPDIQKSLSDLMSQGVSYLLGLLSSLWSGGQALLSVFALVVV
TPVVAFYVLCDWNSMVENVDSWIPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSG
FITFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIGVHPVWLMFALFAFGYLFGFV
GLLLAVPLTAATGVLVRFAFRQYFHSTLYTGLPEAAEERVADKV
>Mature_364_residues
MKLQLQFRFWIGTLVVLILAMWVLREILLPFVVGTAIAYFLNPLVERLSRLGIGRMPAALFMIGLLLLVVVVLLLVVLPI
MSGQLYEFIQNMPSYVTRLQRLVTEENKEWVDQIFGTRLPDIQKSLSDLMSQGVSYLLGLLSSLWSGGQALLSVFALVVV
TPVVAFYVLCDWNSMVENVDSWIPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSG
FITFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIGVHPVWLMFALFAFGYLFGFV
GLLLAVPLTAATGVLVRFAFRQYFHSTLYTGLPEAAEERVADKV

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=305, Percent_Identity=24.9180327868852, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082271, Length=329, Percent_Identity=22.4924012158055, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40200; Mature: 40200

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQLQFRFWIGTLVVLILAMWVLREILLPFVVGTAIAYFLNPLVERLSRLGIGRMPAAL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FMIGLLLLVVVVLLLVVLPIMSGQLYEFIQNMPSYVTRLQRLVTEENKEWVDQIFGTRLP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
DIQKSLSDLMSQGVSYLLGLLSSLWSGGQALLSVFALVVVTPVVAFYVLCDWNSMVENVD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SWIPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSG
HHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FITFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCC
VHPVWLMFALFAFGYLFGFVGLLLAVPLTAATGVLVRFAFRQYFHSTLYTGLPEAAEERV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ADKV
HCCC
>Mature Secondary Structure
MKLQLQFRFWIGTLVVLILAMWVLREILLPFVVGTAIAYFLNPLVERLSRLGIGRMPAAL
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FMIGLLLLVVVVLLLVVLPIMSGQLYEFIQNMPSYVTRLQRLVTEENKEWVDQIFGTRLP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
DIQKSLSDLMSQGVSYLLGLLSSLWSGGQALLSVFALVVVTPVVAFYVLCDWNSMVENVD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SWIPVHQRPVVRRLGREMDMAVAGFVRGQALVCLLLGSYYAIALSMAGLNFGLIIGIVSG
HHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FITFIPYVGSLTGLVLAMGVAIVQFFPDWAMIGTVFGIFIVGQTIEGYILSPKLVGDSIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCC
VHPVWLMFALFAFGYLFGFVGLLLAVPLTAATGVLVRFAFRQYFHSTLYTGLPEAAEERV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ADKV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]