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The map label for this gene is yagA [H]

Identifier: 158422554

GI number: 158422554

Start: 1042790

End: 1043734

Strand: Reverse

Name: yagA [H]

Synonym: AZC_0930

Alternate gene names: 158422554

Gene position: 1043734-1042790 (Counterclockwise)

Preceding gene: 158422555

Following gene: 158422550

Centisome position: 19.44

GC content: 66.98

Gene sequence:

>945_bases
ATGAACATCCACAAGCATGCCCGCATGACATTCCACGGTCGAGTCCTTCTGGCGCAGCGGATCACGGTGGAAGGCTGGCG
TACGGCCGACGCGGCCGGGGCCGCCGGCATCTCGGTCCGCACCGCCTACAAATGGCTGGCCCGCTTTCGGGCGGGCGGCG
AAGCGGCCCTTCATGATGCAAGCTCGGCGCCCGGCCGAAAGCCCCGCGCCACGTCGGGCGAGACTGTGGCAGCCATCGAA
GCCCTGCGCCGGCAGCGCCTGAGCGGCCCTGCCATCGCCCACAGCCTCGGCCTGGCCCGCTCGACCGTCGGAGCCATCCT
GCGCCGGATCGGCCTCTCCCGGCTCGCCGCCCTCGATGAAAAGCGGCCCGCCAACCGCTACCAGAAGGCTATGCCGGGCG
AACTCATCCACATGGATACGAAGAAGCTCGGCCGCATCGACGGCATCGGCCACCGCATCACCGGCGACAGAACCAGGCAA
AGCAACAGGCGTGGTACCGGCTGGGAATGCCTCCACGTCGCCATCGACGATGCCTCTCGCCTTGCCTACACCGAAGTCCT
GCCCGACGAGAAGAAGGGCACCGTCTGCGCATTCACCGCCCGCGCGCTCGGCTGGTTTGCCCGCCACGGCGTCGTCACAG
CCCGGCTGATGACCGACAACGGCAGCGCCTACAAGAGCCATGACTTCCGCGATCTGCTCCGCGCTGCCGGCGTCCGTCAC
GTCCGCACCCGGCCCTATACCCCGCGCACCAACGGCAAGGCCGAGCGCTTCATCCAGACCTCCTTGCGCGAATGGGCCTA
TGCCGTCCCGTACACCTCCTCACGTCAGAGGACCCAAGCGATGCCGGGCTGGATCGACACCTACAATCTCAACCGGCCCC
ACTCCGCTCATAACGGCCTCAGCCCATGGACAAGGCTGAACAACCTTCTTGGAAACGACATCTAG

Upstream 100 bases:

>100_bases
CGCGGCTGCTCTAGATGTCGAAGCTATGAAGGTTGTTCATCCGGGGCTTGGGTGAGAGGCTTGGGTTGCGAAGCCAACAA
GTCCTGACCGGAGCACCCGG

Downstream 100 bases:

>100_bases
AGCCGCACGGCGTCACCTGCTGGTCAGGGTATCAGCAGGATCGCGCCCGCATTGGTGCGCGCTTCCGCCGTGCGGTGGGC
GGCCGCCACCTCGCCGAGCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNIHKHARMTFHGRVLLAQRITVEGWRTADAAGAAGISVRTAYKWLARFRAGGEAALHDASSAPGRKPRATSGETVAAIE
ALRRQRLSGPAIAHSLGLARSTVGAILRRIGLSRLAALDEKRPANRYQKAMPGELIHMDTKKLGRIDGIGHRITGDRTRQ
SNRRGTGWECLHVAIDDASRLAYTEVLPDEKKGTVCAFTARALGWFARHGVVTARLMTDNGSAYKSHDFRDLLRAAGVRH
VRTRPYTPRTNGKAERFIQTSLREWAYAVPYTSSRQRTQAMPGWIDTYNLNRPHSAHNGLSPWTRLNNLLGNDI

Sequences:

>Translated_314_residues
MNIHKHARMTFHGRVLLAQRITVEGWRTADAAGAAGISVRTAYKWLARFRAGGEAALHDASSAPGRKPRATSGETVAAIE
ALRRQRLSGPAIAHSLGLARSTVGAILRRIGLSRLAALDEKRPANRYQKAMPGELIHMDTKKLGRIDGIGHRITGDRTRQ
SNRRGTGWECLHVAIDDASRLAYTEVLPDEKKGTVCAFTARALGWFARHGVVTARLMTDNGSAYKSHDFRDLLRAAGVRH
VRTRPYTPRTNGKAERFIQTSLREWAYAVPYTSSRQRTQAMPGWIDTYNLNRPHSAHNGLSPWTRLNNLLGNDI
>Mature_314_residues
MNIHKHARMTFHGRVLLAQRITVEGWRTADAAGAAGISVRTAYKWLARFRAGGEAALHDASSAPGRKPRATSGETVAAIE
ALRRQRLSGPAIAHSLGLARSTVGAILRRIGLSRLAALDEKRPANRYQKAMPGELIHMDTKKLGRIDGIGHRITGDRTRQ
SNRRGTGWECLHVAIDDASRLAYTEVLPDEKKGTVCAFTARALGWFARHGVVTARLMTDNGSAYKSHDFRDLLRAAGVRH
VRTRPYTPRTNGKAERFIQTSLREWAYAVPYTSSRQRTQAMPGWIDTYNLNRPHSAHNGLSPWTRLNNLLGNDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=289, Percent_Identity=29.0657439446367, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34824; Mature: 34824

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIHKHARMTFHGRVLLAQRITVEGWRTADAAGAAGISVRTAYKWLARFRAGGEAALHDA
CCCCCCCEEEECCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCC
SSAPGRKPRATSGETVAAIEALRRQRLSGPAIAHSLGLARSTVGAILRRIGLSRLAALDE
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KRPANRYQKAMPGELIHMDTKKLGRIDGIGHRITGDRTRQSNRRGTGWECLHVAIDDASR
CCCHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCHH
LAYTEVLPDEKKGTVCAFTARALGWFARHGVVTARLMTDNGSAYKSHDFRDLLRAAGVRH
HHHHHHCCCCCCCCEEEHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCH
VRTRPYTPRTNGKAERFIQTSLREWAYAVPYTSSRQRTQAMPGWIDTYNLNRPHSAHNGL
HCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCCEECCCCCCCCCCCCCC
SPWTRLNNLLGNDI
CHHHHHHHHHCCCC
>Mature Secondary Structure
MNIHKHARMTFHGRVLLAQRITVEGWRTADAAGAAGISVRTAYKWLARFRAGGEAALHDA
CCCCCCCEEEECCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCC
SSAPGRKPRATSGETVAAIEALRRQRLSGPAIAHSLGLARSTVGAILRRIGLSRLAALDE
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KRPANRYQKAMPGELIHMDTKKLGRIDGIGHRITGDRTRQSNRRGTGWECLHVAIDDASR
CCCHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCHH
LAYTEVLPDEKKGTVCAFTARALGWFARHGVVTARLMTDNGSAYKSHDFRDLLRAAGVRH
HHHHHHCCCCCCCCEEEHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCH
VRTRPYTPRTNGKAERFIQTSLREWAYAVPYTSSRQRTQAMPGWIDTYNLNRPHSAHNGL
HCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHCCCCCEECCCCCCCCCCCCCC
SPWTRLNNLLGNDI
CHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8113168 [H]