| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is cysD [H]
Identifier: 158422551
GI number: 158422551
Start: 1038620
End: 1039414
Strand: Direct
Name: cysD [H]
Synonym: AZC_0927
Alternate gene names: 158422551
Gene position: 1038620-1039414 (Clockwise)
Preceding gene: 158422542
Following gene: 158422552
Centisome position: 19.34
GC content: 65.28
Gene sequence:
>795_bases ATGAACCGTCTGGACGCGCTTGAGGCGCAGAGCATCTTCATTTTGCGCGACGCCTTCGCCCAATTGCGGAAGGTGGCCCT GCTCTGGTCGCTGGGCAAGGATTCCAACGTCATGATCTGGCTGGCGCGCAAGGCCTTCTTCGGCCGCGTGCCCTTTCCCT GCATGCATGTGGACACCGGCCGGAAGTTCCCGGAGATGTACGACTTCCGCGACCGTTATTCGAAGGAATGGGGCCTCGAT CTTCTGCTGGAGGAATGCCCGCCCATCGAGAGCACGGACCCGACCCTGCCGCCCGCCGCCCGCTCCGCCGCCCGCAAGAC GGAAGGCCTGCGCCTCGCGCTCGCCAAGCACGGCTTTGACGGCGTGATCGCCGGCATCCGCCGCGACGAGGAGCCGACCC GCGCCAAGGAGCGCTTCTTCTCCCCGCGCGGCACCGATGGCGCGTGGAACGTGCGCGAGCAGCCCCCGGAATTCTGGGAC CAGTACAACACGGCGCTCACCCCCGGCGCCCATCTGCGCATCCATCCCATCCTGCATTGGACGGAGATGGACATCTGGGC CTACACGAAGCGCGAGAACATTCCCGTCATCCCGCTGTATTTCTCGAACGGCGGCAAGCGCTACCGCTCGCTGGGCGACA AGGACATCACTTTCCCGGTGGATTCCGACGCTTCAACCCTGGACGAAATTCTCGCGGAACTCGCCGTGACCAAGACCTCG GAACGGTCCGGCCGCGCCATGGACCATGAGAGCGAAGACGCCTTCGAGCGCCTGCGCACCGCCGGCTATCTGTGA
Upstream 100 bases:
>100_bases CCGCACCCCTGTCCCGTGCCAACCTGCCGCTCGTGGCGGATGGGCGGCGGGGGTATAAGGACCAAGGCGATGCGGGACCT TTGGGAAAGGAACGACGGGC
Downstream 100 bases:
>100_bases GGCTGCCCGATGAACGCATTGTCCGCCGCCAAGGCTCCCGCACAGACCGCCGCTTCCCTCGAAACGCCGGCCGCCTCTCC GACGCCCGCCGAGCGTGAGC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNRLDALEAQSIFILRDAFAQLRKVALLWSLGKDSNVMIWLARKAFFGRVPFPCMHVDTGRKFPEMYDFRDRYSKEWGLD LLLEECPPIESTDPTLPPAARSAARKTEGLRLALAKHGFDGVIAGIRRDEEPTRAKERFFSPRGTDGAWNVREQPPEFWD QYNTALTPGAHLRIHPILHWTEMDIWAYTKRENIPVIPLYFSNGGKRYRSLGDKDITFPVDSDASTLDEILAELAVTKTS ERSGRAMDHESEDAFERLRTAGYL
Sequences:
>Translated_264_residues MNRLDALEAQSIFILRDAFAQLRKVALLWSLGKDSNVMIWLARKAFFGRVPFPCMHVDTGRKFPEMYDFRDRYSKEWGLD LLLEECPPIESTDPTLPPAARSAARKTEGLRLALAKHGFDGVIAGIRRDEEPTRAKERFFSPRGTDGAWNVREQPPEFWD QYNTALTPGAHLRIHPILHWTEMDIWAYTKRENIPVIPLYFSNGGKRYRSLGDKDITFPVDSDASTLDEILAELAVTKTS ERSGRAMDHESEDAFERLRTAGYL >Mature_264_residues MNRLDALEAQSIFILRDAFAQLRKVALLWSLGKDSNVMIWLARKAFFGRVPFPCMHVDTGRKFPEMYDFRDRYSKEWGLD LLLEECPPIESTDPTLPPAARSAARKTEGLRLALAKHGFDGVIAGIRRDEEPTRAKERFFSPRGTDGAWNVREQPPEFWD QYNTALTPGAHLRIHPILHWTEMDIWAYTKRENIPVIPLYFSNGGKRYRSLGDKDITFPVDSDASTLDEILAELAVTKTS ERSGRAMDHESEDAFERLRTAGYL
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=299, Percent_Identity=40.4682274247492, Blast_Score=214, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 30247; Mature: 30247
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLDALEAQSIFILRDAFAQLRKVALLWSLGKDSNVMIWLARKAFFGRVPFPCMHVDTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCEEECCCC RKFPEMYDFRDRYSKEWGLDLLLEECPPIESTDPTLPPAARSAARKTEGLRLALAKHGFD CCCHHHHHHHHHHCHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHCCCC GVIAGIRRDEEPTRAKERFFSPRGTDGAWNVREQPPEFWDQYNTALTPGAHLRIHPILHW HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEE TEMDIWAYTKRENIPVIPLYFSNGGKRYRSLGDKDITFPVDSDASTLDEILAELAVTKTS EECEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCC ERSGRAMDHESEDAFERLRTAGYL CCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNRLDALEAQSIFILRDAFAQLRKVALLWSLGKDSNVMIWLARKAFFGRVPFPCMHVDTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHCCCCCCEEECCCC RKFPEMYDFRDRYSKEWGLDLLLEECPPIESTDPTLPPAARSAARKTEGLRLALAKHGFD CCCHHHHHHHHHHCHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHCCCC GVIAGIRRDEEPTRAKERFFSPRGTDGAWNVREQPPEFWDQYNTALTPGAHLRIHPILHW HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEE TEMDIWAYTKRENIPVIPLYFSNGGKRYRSLGDKDITFPVDSDASTLDEILAELAVTKTS EECEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCC ERSGRAMDHESEDAFERLRTAGYL CCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA