| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422513
Identifier: 158422513
GI number: 158422513
Start: 996314
End: 997495
Strand: Direct
Name: 158422513
Synonym: AZC_0889
Alternate gene names: NA
Gene position: 996314-997495 (Clockwise)
Preceding gene: 158422512
Following gene: 158422516
Centisome position: 18.55
GC content: 71.57
Gene sequence:
>1182_bases TTGGGATTTTCCGCGCGTGCTCCCATAGTGACGTGCGGGCTCGCTGGGCGGCCCGCCGCACTGGGGGCAATGCCGGTGGT GATGCTGCGCGAGGAAGCTGTCGCGCTTGTAGGGCGGATCTACGAGGCGGCGGCAATTCCCGAATTCTGGCCGGGGGTGC TCGGGTCGATTTCCCGCAGCATCGACGGGGTCGGCGCCTGCCTGTTCACGCCCGATGGCCGCTGGATTGCCTCCGAGGCC TTCGCGGAGGAGGTGGACCTTTTCATTTCGCGGGGCTGGCTGGAGCGCGACACCTTCAACGCCCGACTGGAAGCGAGCGG GCGCGGCGGCTTCGTCTGCGACCTCGACCTGTTTCGCCGCGAGGAGATCGACCGCGAGCCGGTCTATGCGGACTGGCTCC ACCCGCGTGGCCTCGGCTGGGGCGCGTCCTCGCTGATGCGGCTGCCGCACGAGCGCACCGTCTTCATCAATGTGGAGCGC CGCCGGGGGCGGGGCCCGGTGGAGACGCCCTTCGTCCGGCACCTCAACCAGCTTCACCCGCACATTGCGCGGGCAGCGAT GATTTCCTCGCACCTTGCGCTGGAGCGCACGCAGGCGGCGTCCAGTGCCTTGCAGATGGTCGGCGTGCCCGCGGCGCTGC TGCGGCCGGGCGGACGGGTGGAGCATGCCAACGGCCTCTTCCTCCAGCTCCAGCCCCAGCCGGTGCGGGAGTGCAGCGCC GAGCTGGTGCTTGCCAACGCGCGGGCGCAGGCGGAGCTGGCGCTGACGCTGGCTGAGATCGAGGGCGGCCATGGGCTCGG CCGCGCCATCGCCTTGCCCGCGCAGGGCGAGCGCGGGGCCTATGTGCTGCACGTCATGCCGGTAAGGGGCGCTGCGCGGG ACGTGTTCTCCGCCTGCACGGCCATGGTTCTGGCCACGCCCGTGGTGGCGCGGCCGGTGCTGCCCGCGGACCTGCTCGTT TCGCTCTTCGATCTCACGCCCGCCGAGGCGCGCGTCGCGCACAAGATCGCCGCCGGCGCGACCGTGGAGACCATCGCGGA GACGCTGGGCGTGTCACGCGAGACGGTGCGCTCGCAGCTGAAGGCGGCGCTGGCGAAGGTGGGCCTCACCCGGCAGGCGG AACTGGTGGGGCTGCTCGCCTCCATCCCCGCCGGCCATCCCCGCATGGGGGATGCGCAGTAG
Upstream 100 bases:
>100_bases CGGCCGACGCCGCCGAGTGATCCCGTCGCAAGACCTCTGAAACGACAGGCCGCCCCCCACAGGGCGGCCTGTTTTTTTTA GGCCGGGTTTCCGCCGCCGC
Downstream 100 bases:
>100_bases GGCGCGGCCCGCAGCCGACCCCGCTTCAGAGTTCGAAGGGCGGCAGGCTCTTCGCCTTTTCCAGCACCTCGGCGACGGTG GGCTGGCCGGCGACCGCGCG
Product: DNA-binding HTH domain-containing proteins
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; HNH Endonuclease; LuxR Family Regulatory Protein; Regulatory Protein LuxR; Two-Component Response Regulator Protein
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MGFSARAPIVTCGLAGRPAALGAMPVVMLREEAVALVGRIYEAAAIPEFWPGVLGSISRSIDGVGACLFTPDGRWIASEA FAEEVDLFISRGWLERDTFNARLEASGRGGFVCDLDLFRREEIDREPVYADWLHPRGLGWGASSLMRLPHERTVFINVER RRGRGPVETPFVRHLNQLHPHIARAAMISSHLALERTQAASSALQMVGVPAALLRPGGRVEHANGLFLQLQPQPVRECSA ELVLANARAQAELALTLAEIEGGHGLGRAIALPAQGERGAYVLHVMPVRGAARDVFSACTAMVLATPVVARPVLPADLLV SLFDLTPAEARVAHKIAAGATVETIAETLGVSRETVRSQLKAALAKVGLTRQAELVGLLASIPAGHPRMGDAQ
Sequences:
>Translated_393_residues MGFSARAPIVTCGLAGRPAALGAMPVVMLREEAVALVGRIYEAAAIPEFWPGVLGSISRSIDGVGACLFTPDGRWIASEA FAEEVDLFISRGWLERDTFNARLEASGRGGFVCDLDLFRREEIDREPVYADWLHPRGLGWGASSLMRLPHERTVFINVER RRGRGPVETPFVRHLNQLHPHIARAAMISSHLALERTQAASSALQMVGVPAALLRPGGRVEHANGLFLQLQPQPVRECSA ELVLANARAQAELALTLAEIEGGHGLGRAIALPAQGERGAYVLHVMPVRGAARDVFSACTAMVLATPVVARPVLPADLLV SLFDLTPAEARVAHKIAAGATVETIAETLGVSRETVRSQLKAALAKVGLTRQAELVGLLASIPAGHPRMGDAQ >Mature_392_residues GFSARAPIVTCGLAGRPAALGAMPVVMLREEAVALVGRIYEAAAIPEFWPGVLGSISRSIDGVGACLFTPDGRWIASEAF AEEVDLFISRGWLERDTFNARLEASGRGGFVCDLDLFRREEIDREPVYADWLHPRGLGWGASSLMRLPHERTVFINVERR RGRGPVETPFVRHLNQLHPHIARAAMISSHLALERTQAASSALQMVGVPAALLRPGGRVEHANGLFLQLQPQPVRECSAE LVLANARAQAELALTLAEIEGGHGLGRAIALPAQGERGAYVLHVMPVRGAARDVFSACTAMVLATPVVARPVLPADLLVS LFDLTPAEARVAHKIAAGATVETIAETLGVSRETVRSQLKAALAKVGLTRQAELVGLLASIPAGHPRMGDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41975; Mature: 41844
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSARAPIVTCGLAGRPAALGAMPVVMLREEAVALVGRIYEAAAIPEFWPGVLGSISRS CCCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IDGVGACLFTPDGRWIASEAFAEEVDLFISRGWLERDTFNARLEASGRGGFVCDLDLFRR HCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEHHHHHH EEIDREPVYADWLHPRGLGWGASSLMRLPHERTVFINVERRRGRGPVETPFVRHLNQLHP HHCCCCCCEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH HIARAAMISSHLALERTQAASSALQMVGVPAALLRPGGRVEHANGLFLQLQPQPVRECSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCCEEEEECCCHHHHCCH ELVLANARAQAELALTLAEIEGGHGLGRAIALPAQGERGAYVLHVMPVRGAARDVFSACT HEEEECCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCEEEEEEEECCCHHHHHHHHHH AMVLATPVVARPVLPADLLVSLFDLTPAEARVAHKIAAGATVETIAETLGVSRETVRSQL HHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH KAALAKVGLTRQAELVGLLASIPAGHPRMGDAQ HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GFSARAPIVTCGLAGRPAALGAMPVVMLREEAVALVGRIYEAAAIPEFWPGVLGSISRS CCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IDGVGACLFTPDGRWIASEAFAEEVDLFISRGWLERDTFNARLEASGRGGFVCDLDLFRR HCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEHHHHHH EEIDREPVYADWLHPRGLGWGASSLMRLPHERTVFINVERRRGRGPVETPFVRHLNQLHP HHCCCCCCEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH HIARAAMISSHLALERTQAASSALQMVGVPAALLRPGGRVEHANGLFLQLQPQPVRECSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCCCEEEEECCCHHHHCCH ELVLANARAQAELALTLAEIEGGHGLGRAIALPAQGERGAYVLHVMPVRGAARDVFSACT HEEEECCCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCEEEEEEEECCCHHHHHHHHHH AMVLATPVVARPVLPADLLVSLFDLTPAEARVAHKIAAGATVETIAETLGVSRETVRSQL HHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH KAALAKVGLTRQAELVGLLASIPAGHPRMGDAQ HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA