| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is catB1 [H]
Identifier: 158422443
GI number: 158422443
Start: 923278
End: 924408
Strand: Direct
Name: catB1 [H]
Synonym: AZC_0819
Alternate gene names: 158422443
Gene position: 923278-924408 (Clockwise)
Preceding gene: 158422442
Following gene: 158422444
Centisome position: 17.19
GC content: 67.9
Gene sequence:
>1131_bases ATGAGCTGGGACAGCGTCGTCGAGCGTATCCGCATCTTCCTCGTGGAGAGCCCCATCAAGATGGCCCGCCTTCAGGGCGT CGGCAATGTGAAGGGCTCCGTGAAGCGCGTGCTGCTGGAAGTGACCAGCGCCGACGGCATCGTGGGCTGGGGCGAGGCGG CCCCGTGGGAGGTGTTCACCGGCACGCCGGAAGCCGCCTTCTCCGCCCTCGACATCTACCTGCGTCCGCTCATCCTCGGC GCGCCCATCAAGCGTGTGCGCGAGCTGATGGCGCGCATGGACAAGATGCTGGTCGGCCATGGCGAGGCCAAGGCGGCGGT CGAGATGGCGCTGCTGGACATCCTCGGCAAGGCGACGGGCCTCTCCGTGGCGGACCTGCTGGGCGGGCGGGTGCGAGACC GCATCCCGCTGTCCTTCTCCATTGCGGACCCGGACTTCGACGCGGATCTCGAGCGGATGCGCGCCATGGTCCCAGCCGGG CACACCGTCTTCAAGATGAAGACCGGCGTGAAGCCGCACGCGGAAGAGCTGCGCATCCTGGAGACCATGCGGGGCGAATT CGGCGAGCGGATCGACCTGCGGCTCGACTTCAATCAGGCCCTGACGCCGTTCGGCGCCATGAAGATCCTGCGGGATGTGG ACGCCTTCCGCCCCACCTTCATCGAGCAGCCGGTGCCGCGTCGCCACCTCGACGCCATGGCCGGCTTCGCCGCCGCGCTC GACACGCCCATCCTCGCGGATGAAAGCTGCTTCGATGCGGTGGACCTGATGGAGGTGGTGCGCCGGCAGGCGGCGGATGC CATCTCGGTCAAGATCATGAAGTGCGGCGGCCTCATGAAGGCGCAGTCCCTCATGGCCATTGCCGACACCGCCGGCCTGC CGGGCTATGGCGGCACGCTGTGGGAAGGCGGCATTGCGCTCGCCGCCGGCACGCAACTCATCGCCGCGACGCCGGGCATC TCGCTCGGCTGCGAATTCTACATGCCCCACCATGTGCTCACCGAGGACGTGCTGGAAGAGCGCATCGCTAACAGCGCGGG TCATGTGATCGTGCCCGATGGTCCCGGCCTCGGCATCTCCATCAGCGAGGCCTCGCTGCGCGGCAACGCCAAGATCCTCG CCGAGCGCTGA
Upstream 100 bases:
>100_bases GCCTTCCTGTCCCACTTCCACAAGCGCGGCGAGGCCCCGGCGCCGAGCGCCTGATCCCTGGCCTCCGGCCGCACCCCTAT CTGCCTGAAAGGACCCCGCG
Downstream 100 bases:
>100_bases AGCCTCTTTCCGGACCAGACCCATGAGCCTCCATATCGTCGTCATCGGTGCCGGCATCGTCGGCGCCTCAACCGCGCTTG AACTCCAGCGGGACGGCCAT
Product: muconate cycloisomerase
Products: NA
Alternate protein names: Cis,cis-muconate lactonizing enzyme I 1; MLE 1; Muconate cycloisomerase I 1 [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSWDSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFTGTPEAAFSALDIYLRPLILG APIKRVRELMARMDKMLVGHGEAKAAVEMALLDILGKATGLSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVPAG HTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAAL DTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGGIALAAGTQLIAATPGI SLGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGISISEASLRGNAKILAER
Sequences:
>Translated_376_residues MSWDSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFTGTPEAAFSALDIYLRPLILG APIKRVRELMARMDKMLVGHGEAKAAVEMALLDILGKATGLSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVPAG HTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAAL DTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGGIALAAGTQLIAATPGI SLGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGISISEASLRGNAKILAER >Mature_375_residues SWDSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFTGTPEAAFSALDIYLRPLILGA PIKRVRELMARMDKMLVGHGEAKAAVEMALLDILGKATGLSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVPAGH TVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAALD TPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGGIALAAGTQLIAATPGIS LGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGISISEASLRGNAKILAER
Specific function: Catalyzes a syn cycloisomerization [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994953, Length=360, Percent_Identity=26.1111111111111, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1787864, Length=370, Percent_Identity=23.5135135135135, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013370 - InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =5.5.1.1 [H]
Molecular weight: Translated: 40493; Mature: 40362
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00908 MR_MLE_1 ; PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWDSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFT CCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEEEC GTPEAAFSALDIYLRPLILGAPIKRVRELMARMDKMLVGHGEAKAAVEMALLDILGKATG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC LSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRIL CHHHHHHCCHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH ETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAAL HHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH DTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTL CCCCCCCCHHHHHHHHHHHHHHHHCHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCH WEGGIALAAGTQLIAATPGISLGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGIS HCCCEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE ISEASLRGNAKILAER EEHHHCCCCCEEEECC >Mature Secondary Structure SWDSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFT CHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEEEC GTPEAAFSALDIYLRPLILGAPIKRVRELMARMDKMLVGHGEAKAAVEMALLDILGKATG CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC LSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRIL CHHHHHHCCHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH ETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAAL HHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH DTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTL CCCCCCCCHHHHHHHHHHHHHHHHCHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCH WEGGIALAAGTQLIAATPGISLGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGIS HCCCEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE ISEASLRGNAKILAER EEHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9473520; 9260969 [H]