| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158422436
GI number: 158422436
Start: 916165
End: 917751
Strand: Reverse
Name: gsiB [H]
Synonym: AZC_0812
Alternate gene names: 158422436
Gene position: 917751-916165 (Counterclockwise)
Preceding gene: 158422438
Following gene: 158422435
Centisome position: 17.09
GC content: 63.52
Gene sequence:
>1587_bases ATGCCTAGATGTTGGGCGAACAGCACCGGCATCCAATATCAAACCCAGAGAGAGAACATGGCTTTCCTTCAGTCCCGTCT CTCACGTGCTCTCGCGGTGGCCATGTTCGCCATCGCTCCGGCGGCCGCTCACGCGGGCAAGGCCAACGACACGCTCGTCT ATGCCTCGGATTCCGAGCCGGAGAACGTCAGCCCCTATCATAACAACGTGCGGGAAGGCGTCATCATCGCCCGCCACGTG TTCGACAACCTGATCTTCCACGATCTGGCCACCGGCAAATACGAGCCGCAGCTCGCCACCAACTGGACCTGGGCGGATCC GCAGACGCTGGACCTCACCATCCGCAAGGGCGTCACCTTCCACAATGGCGACCCGCTGACCGCCGACGACGTGGTATTCA CGCTCAACTACGTGGTGTCGCCGGACTCCAAGGTGGTGACCAAGCAGAACGTCAACTGGATCAAGAGCGCCGAGAAGATT GGCGACGACAAGGTCCGCATCCACCTCGTGGGCCCGTTCCCGGCGGCCATCGAATATCTCGCCGGCCCGGTGGTCATCTA TCCGGAGAAGTACTTCAAGAAGGTCGGCCTCGACGGCTTCGCCAAGGCCCCCATCGGCTCCGGACCCTACAAGGTGACTT CGGTCACGCCCGGCAAGGGCGTGAAGATGGAAAAGAACACCAGCTACTGGAAGGACAGCCCGCTCGGCCAGCCGAAGATC GGCAAGCTGGAATTCCGCATCATCCCCGATCCGGAGACCCAGGTGGCCGAACTGATGACCGGCGGCGTGGACTGGATCTG GCGCGTGCAGGCCGACCAGGCCAAGCAGCTCGGCGCCGTGCCCAACCTCACCGTGCTCTCGGCCGAGACCATGCGCGTCG GCTTCCTCCAGTTCGACTCGCAGGGCCGTGCTCCCGGCTCCGAGCCGCTGAAGGATCCCCGCGTCCGCCAGGCCATCTCC TATGCCATCGACCGCAAGGCCATGGTGGACAATCTGGTGCGCGGCGGCGCCCGCGTCATGAACTCGGCCTGCTTCATCGA TCAGTTCGGCTGCACCGACAAGGGCGTGCCGCGCTATGACTATGATCCCGCCAAGGCCAAGAAGCTGCTGGCCGACGCCG GCTATCCCAACGGCTTCTCCATCGACCTCTACGCCTATCGCGAGCGCGAATATGCGGAAGCGGTGGTCGGCTATCTTGGC GCCGTCGGCATCAAGGCGAAGCTGAACTTCATGAAGTATGCGGCCCTGCGCGAGCTGTCCCGCTCCGGCAAGGTTCCGAT CTACTTCCAGACCTGGGGCTCCTTCTCGGTGGCCGATGCCTCCGCCTTCACCGGCGTGTGGTTCAAGGGCGACGAGGACG ACATGACCCGCGACCAGCAGGTCACGGACATGCTCAAGAAGGCGGATACGACGGTGGAGACGGAAGCGCGGCTTGCCGCC TATTCCGAGGCGTTGAAGCTCATCGCCGAGCGCGCCTACCTGCTGCCGCTCTTCTCCTATTCGTCCAACTACGCCTTCAC CAGCGACCTGAACTTCAACGCCCAGCCCGACGAGCTGCCGCGCTTCTTCAAGGCCCGCTGGCAGTGA
Upstream 100 bases:
>100_bases GTAACCCCCGGGTGCAGCGCGACAGGGCTTCATTGCCGAAACGGCAACGATAATCACGAAATATTCTAATTGCGATATCC GAAAGGCTCAATAAGCTGCC
Downstream 100 bases:
>100_bases CCTCATGGACGGCGCGCCTTGGGCGCGCCGTCCGCCGACCGTGGCGTGCCTAAAGGCCCGCCCGGCCCGTCCGCCGCGAT GGCGCTCATGCGCCCGGCGT
Product: peptide ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MPRCWANSTGIQYQTQRENMAFLQSRLSRALAVAMFAIAPAAAHAGKANDTLVYASDSEPENVSPYHNNVREGVIIARHV FDNLIFHDLATGKYEPQLATNWTWADPQTLDLTIRKGVTFHNGDPLTADDVVFTLNYVVSPDSKVVTKQNVNWIKSAEKI GDDKVRIHLVGPFPAAIEYLAGPVVIYPEKYFKKVGLDGFAKAPIGSGPYKVTSVTPGKGVKMEKNTSYWKDSPLGQPKI GKLEFRIIPDPETQVAELMTGGVDWIWRVQADQAKQLGAVPNLTVLSAETMRVGFLQFDSQGRAPGSEPLKDPRVRQAIS YAIDRKAMVDNLVRGGARVMNSACFIDQFGCTDKGVPRYDYDPAKAKKLLADAGYPNGFSIDLYAYREREYAEAVVGYLG AVGIKAKLNFMKYAALRELSRSGKVPIYFQTWGSFSVADASAFTGVWFKGDEDDMTRDQQVTDMLKKADTTVETEARLAA YSEALKLIAERAYLLPLFSYSSNYAFTSDLNFNAQPDELPRFFKARWQ
Sequences:
>Translated_528_residues MPRCWANSTGIQYQTQRENMAFLQSRLSRALAVAMFAIAPAAAHAGKANDTLVYASDSEPENVSPYHNNVREGVIIARHV FDNLIFHDLATGKYEPQLATNWTWADPQTLDLTIRKGVTFHNGDPLTADDVVFTLNYVVSPDSKVVTKQNVNWIKSAEKI GDDKVRIHLVGPFPAAIEYLAGPVVIYPEKYFKKVGLDGFAKAPIGSGPYKVTSVTPGKGVKMEKNTSYWKDSPLGQPKI GKLEFRIIPDPETQVAELMTGGVDWIWRVQADQAKQLGAVPNLTVLSAETMRVGFLQFDSQGRAPGSEPLKDPRVRQAIS YAIDRKAMVDNLVRGGARVMNSACFIDQFGCTDKGVPRYDYDPAKAKKLLADAGYPNGFSIDLYAYREREYAEAVVGYLG AVGIKAKLNFMKYAALRELSRSGKVPIYFQTWGSFSVADASAFTGVWFKGDEDDMTRDQQVTDMLKKADTTVETEARLAA YSEALKLIAERAYLLPLFSYSSNYAFTSDLNFNAQPDELPRFFKARWQ >Mature_527_residues PRCWANSTGIQYQTQRENMAFLQSRLSRALAVAMFAIAPAAAHAGKANDTLVYASDSEPENVSPYHNNVREGVIIARHVF DNLIFHDLATGKYEPQLATNWTWADPQTLDLTIRKGVTFHNGDPLTADDVVFTLNYVVSPDSKVVTKQNVNWIKSAEKIG DDKVRIHLVGPFPAAIEYLAGPVVIYPEKYFKKVGLDGFAKAPIGSGPYKVTSVTPGKGVKMEKNTSYWKDSPLGQPKIG KLEFRIIPDPETQVAELMTGGVDWIWRVQADQAKQLGAVPNLTVLSAETMRVGFLQFDSQGRAPGSEPLKDPRVRQAISY AIDRKAMVDNLVRGGARVMNSACFIDQFGCTDKGVPRYDYDPAKAKKLLADAGYPNGFSIDLYAYREREYAEAVVGYLGA VGIKAKLNFMKYAALRELSRSGKVPIYFQTWGSFSVADASAFTGVWFKGDEDDMTRDQQVTDMLKKADTTVETEARLAAY SEALKLIAERAYLLPLFSYSSNYAFTSDLNFNAQPDELPRFFKARWQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=495, Percent_Identity=27.4747474747475, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789966, Length=510, Percent_Identity=24.5098039215686, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1789887, Length=523, Percent_Identity=25.0478011472275, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1787762, Length=490, Percent_Identity=23.0612244897959, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1787551, Length=510, Percent_Identity=22.3529411764706, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87082063, Length=158, Percent_Identity=31.0126582278481, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58681; Mature: 58550
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRCWANSTGIQYQTQRENMAFLQSRLSRALAVAMFAIAPAAAHAGKANDTLVYASDSEP CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC ENVSPYHNNVREGVIIARHVFDNLIFHDLATGKYEPQLATNWTWADPQTLDLTIRKGVTF CCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCEEE HNGDPLTADDVVFTLNYVVSPDSKVVTKQNVNWIKSAEKIGDDKVRIHLVGPFPAAIEYL ECCCCCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHH AGPVVIYPEKYFKKVGLDGFAKAPIGSGPYKVTSVTPGKGVKMEKNTSYWKDSPLGQPKI CCCEEECCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCC GKLEFRIIPDPETQVAELMTGGVDWIWRVQADQAKQLGAVPNLTVLSAETMRVGFLQFDS CCEEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEEEEECCCEEEEEEEECC QGRAPGSEPLKDPRVRQAISYAIDRKAMVDNLVRGGARVMNSACFIDQFGCTDKGVPRYD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCCCC YDPAKAKKLLADAGYPNGFSIDLYAYREREYAEAVVGYLGAVGIKAKLNFMKYAALRELS CCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RSGKVPIYFQTWGSFSVADASAFTGVWFKGDEDDMTRDQQVTDMLKKADTTVETEARLAA HCCCCEEEEEECCCEEECCCCHHEEEEEECCCHHCCHHHHHHHHHHHCCCCHHHHHHHHH YSEALKLIAERAYLLPLFSYSSNYAFTSDLNFNAQPDELPRFFKARWQ HHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PRCWANSTGIQYQTQRENMAFLQSRLSRALAVAMFAIAPAAAHAGKANDTLVYASDSEP CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC ENVSPYHNNVREGVIIARHVFDNLIFHDLATGKYEPQLATNWTWADPQTLDLTIRKGVTF CCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCEEE HNGDPLTADDVVFTLNYVVSPDSKVVTKQNVNWIKSAEKIGDDKVRIHLVGPFPAAIEYL ECCCCCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHH AGPVVIYPEKYFKKVGLDGFAKAPIGSGPYKVTSVTPGKGVKMEKNTSYWKDSPLGQPKI CCCEEECCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCC GKLEFRIIPDPETQVAELMTGGVDWIWRVQADQAKQLGAVPNLTVLSAETMRVGFLQFDS CCEEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEEEEECCCEEEEEEEECC QGRAPGSEPLKDPRVRQAISYAIDRKAMVDNLVRGGARVMNSACFIDQFGCTDKGVPRYD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCCCC YDPAKAKKLLADAGYPNGFSIDLYAYREREYAEAVVGYLGAVGIKAKLNFMKYAALRELS CCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RSGKVPIYFQTWGSFSVADASAFTGVWFKGDEDDMTRDQQVTDMLKKADTTVETEARLAA HCCCCEEEEEECCCEEECCCCHHEEEEEECCCHHCCHHHHHHHHHHHCCCCHHHHHHHHH YSEALKLIAERAYLLPLFSYSSNYAFTSDLNFNAQPDELPRFFKARWQ HHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA