Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is nrtB [H]

Identifier: 158422385

GI number: 158422385

Start: 861102

End: 861956

Strand: Direct

Name: nrtB [H]

Synonym: AZC_0761

Alternate gene names: 158422385

Gene position: 861102-861956 (Clockwise)

Preceding gene: 158422384

Following gene: 158422386

Centisome position: 16.04

GC content: 65.61

Gene sequence:

>855_bases
ATGGGGTTGCCGCTGCGTCTCAGGGCCGGGTTGCTGTCGGTCCTGATCCTCGCCGTTTTCCTGCTCGCCTGGCAGGCGGC
CACCGCCGGCTTCGGCGGGGGCTCCGCCAGCCTGCCGGCGGGGATGGATCCGGAATATGCCAAGCTGATGGGGCTGACCG
CCACCGCCGGCAAATCGGCCATGCCCAGCCCGCTCGAAGTGGGGCGGCAGCTCTGGACGCTGCTCTCCAACCCCTTCTAT
GACAAGGGGCCGAACGACAAGGGCCTCGGCATCCAGCTCGCCTTCTCGCTGGCCCGGGTGCTCGGCGGCTACGGTCTTGC
GGTGGCAGTGGCCATCCCGCTCGGCTTTGTCATTGGCATGTCGCCGCTCATGAGCCGTGCGCTCGATCCCTTCATCCAGG
TTCTGAAACCCATCTCGCCCCTCGCCTGGATGCCGCTCGCCCTCTACACGATCAAGGATTCCAGTATTTCGGCGGTGTTC
GTCATCTTCATCTGCTCGGTGTGGCCGATGCTGATCAACACCGCCTTCGGCGTCGCCAGCGTGCGCAAGGAGTGGCTGAA
TGTCGCCCGCACGCTGGAGGTGGGGCCGCTGAAGCGCGCCTTCACCGTCATCCTGCCCGCCGCGGCTCCCACCATCCTCA
CCGGCATGCGGATCTCCATCGGCATCGCCTGGCTGGTGATCGTGGCGGCCGAGATGCTCGTGGGCGGCACCGGCATCGGC
TATTTCGTCTGGAACGAGTGGAATAACCTCTCGATCACCAATGTCATCATTGCGATCCTGGTGATCGGTGTCGTCGGCAT
GGTCCTCGATCAGATCCTCGCCGCCGTCGCGCGGCTCGTGACCTTCCCGGAGTAG

Upstream 100 bases:

>100_bases
GCTTCCGCGACCAAGACCTTCTCGGTGATGGGCAAGCCCTTCGATCCGGCGAAGCCCGAAGACTATGTGGCGAGCTTCGC
CATCAAGCGGGCCTGACGCC

Downstream 100 bases:

>100_bases
GCCATGGGCGAGCGTTATCTCTCCATCGAGGGCATTGCCCGTCGCTTTCCCTCGGCAAAGGGCGAGACCACCGTGTTCGA
GGACCTTTGGTTCTCCATGA

Product: nitrate ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MGLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSAMPSPLEVGRQLWTLLSNPFY
DKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVF
VIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG
YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE

Sequences:

>Translated_284_residues
MGLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSAMPSPLEVGRQLWTLLSNPFY
DKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVF
VIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG
YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE
>Mature_283_residues
GLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSAMPSPLEVGRQLWTLLSNPFYD
KGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVFV
IFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIGY
FVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=221, Percent_Identity=32.579185520362, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI87081802, Length=219, Percent_Identity=28.7671232876712, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30031; Mature: 29900

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCC
MPSPLEVGRQLWTLLSNPFYDKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVFVIFICSVWPMLINTAFGVAS
HHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG
HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCC
MPSPLEVGRQLWTLLSNPFYDKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVFVIFICSVWPMLINTAFGVAS
HHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG
HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]