| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is nrtB [H]
Identifier: 158422385
GI number: 158422385
Start: 861102
End: 861956
Strand: Direct
Name: nrtB [H]
Synonym: AZC_0761
Alternate gene names: 158422385
Gene position: 861102-861956 (Clockwise)
Preceding gene: 158422384
Following gene: 158422386
Centisome position: 16.04
GC content: 65.61
Gene sequence:
>855_bases ATGGGGTTGCCGCTGCGTCTCAGGGCCGGGTTGCTGTCGGTCCTGATCCTCGCCGTTTTCCTGCTCGCCTGGCAGGCGGC CACCGCCGGCTTCGGCGGGGGCTCCGCCAGCCTGCCGGCGGGGATGGATCCGGAATATGCCAAGCTGATGGGGCTGACCG CCACCGCCGGCAAATCGGCCATGCCCAGCCCGCTCGAAGTGGGGCGGCAGCTCTGGACGCTGCTCTCCAACCCCTTCTAT GACAAGGGGCCGAACGACAAGGGCCTCGGCATCCAGCTCGCCTTCTCGCTGGCCCGGGTGCTCGGCGGCTACGGTCTTGC GGTGGCAGTGGCCATCCCGCTCGGCTTTGTCATTGGCATGTCGCCGCTCATGAGCCGTGCGCTCGATCCCTTCATCCAGG TTCTGAAACCCATCTCGCCCCTCGCCTGGATGCCGCTCGCCCTCTACACGATCAAGGATTCCAGTATTTCGGCGGTGTTC GTCATCTTCATCTGCTCGGTGTGGCCGATGCTGATCAACACCGCCTTCGGCGTCGCCAGCGTGCGCAAGGAGTGGCTGAA TGTCGCCCGCACGCTGGAGGTGGGGCCGCTGAAGCGCGCCTTCACCGTCATCCTGCCCGCCGCGGCTCCCACCATCCTCA CCGGCATGCGGATCTCCATCGGCATCGCCTGGCTGGTGATCGTGGCGGCCGAGATGCTCGTGGGCGGCACCGGCATCGGC TATTTCGTCTGGAACGAGTGGAATAACCTCTCGATCACCAATGTCATCATTGCGATCCTGGTGATCGGTGTCGTCGGCAT GGTCCTCGATCAGATCCTCGCCGCCGTCGCGCGGCTCGTGACCTTCCCGGAGTAG
Upstream 100 bases:
>100_bases GCTTCCGCGACCAAGACCTTCTCGGTGATGGGCAAGCCCTTCGATCCGGCGAAGCCCGAAGACTATGTGGCGAGCTTCGC CATCAAGCGGGCCTGACGCC
Downstream 100 bases:
>100_bases GCCATGGGCGAGCGTTATCTCTCCATCGAGGGCATTGCCCGTCGCTTTCCCTCGGCAAAGGGCGAGACCACCGTGTTCGA GGACCTTTGGTTCTCCATGA
Product: nitrate ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSAMPSPLEVGRQLWTLLSNPFY DKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVF VIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE
Sequences:
>Translated_284_residues MGLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSAMPSPLEVGRQLWTLLSNPFY DKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVF VIFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE >Mature_283_residues GLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSAMPSPLEVGRQLWTLLSNPFYD KGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGMSPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVFV IFICSVWPMLINTAFGVASVRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIGY FVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=221, Percent_Identity=32.579185520362, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI87081802, Length=219, Percent_Identity=28.7671232876712, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30031; Mature: 29900
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCC MPSPLEVGRQLWTLLSNPFYDKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVFVIFICSVWPMLINTAFGVAS HHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GLPLRLRAGLLSVLILAVFLLAWQAATAGFGGGSASLPAGMDPEYAKLMGLTATAGKSA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCC MPSPLEVGRQLWTLLSNPFYDKGPNDKGLGIQLAFSLARVLGGYGLAVAVAIPLGFVIGM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SPLMSRALDPFIQVLKPISPLAWMPLALYTIKDSSISAVFVIFICSVWPMLINTAFGVAS HHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRKEWLNVARTLEVGPLKRAFTVILPAAAPTILTGMRISIGIAWLVIVAAEMLVGGTGIG HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE YFVWNEWNNLSITNVIIAILVIGVVGMVLDQILAAVARLVTFPE EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]