| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422324
Identifier: 158422324
GI number: 158422324
Start: 778658
End: 779383
Strand: Reverse
Name: 158422324
Synonym: AZC_0700
Alternate gene names: NA
Gene position: 779383-778658 (Counterclockwise)
Preceding gene: 158422325
Following gene: 158422323
Centisome position: 14.51
GC content: 66.8
Gene sequence:
>726_bases ATGACCGCTCAGGATCTGCCGCTGCCCCATTCCTCCGCCCCCGGCGCGCGCGGCTTCGATCAGGTGGAGACCTGGGTCTT CGACCTCGACAACACGCTCTATCCCGCCCAGCACGACCTCTGGGGCCAGATCGACGCGCGGATGCGCGACTATATCGCCG GCCTTTTGAACATCAGCCGCGAGGAAGCCTTCGCGCGGCAAAAGGACTATTATCGGCGCTACGGCACCTCGCTCCGCGGC CTGATGATCGAGCACGGCATCGACGCCCATGCCTTCCTCGACCATGTGCATGAGGTGGACCTCTCGACGCTGGAACCCTC CCCCCGCCTCGCGGCGGCGCTGGAGGGGCTGCCGGGCACCAAGCTCGTCTATACCAACGGTTCCGAGCGCCACGCCCTGA ACGTGCTCGGCAAGCTGGGGCTCGATACCCACTTCTCGGCCATTCACGACATCGTGGCCGCCGAATTCCACCCCAAGCCC ACCGAGGAAGCCTATCTGCGCTTCCTGCGCGCCCACGGGGTGGAGCCGACCCGCGCCGCCATGTTCGAGGACCTCGCCCG CAACCTCGAAGTGCCGCACCGCCTCGGCATGACCACCATCCTCGTGGTGCCGCCCACCGAGCAGATCGAGAGCCGCGAGA GCTGGGAATTCGAAGGCCGCGAAGCCGCCTTCGTTGACCACGTGACCGAAGACCTCGCCGGCTTCCTGGAAACGCTCGGC GGCTGA
Upstream 100 bases:
>100_bases TGCTGGAGCTGCTGACCGACCACGGCATCGGCACCCTCATCACCCGCTGACATCCCGGGCGCGCCCCTCTCCGGGCGCGC CCTTTTCACACGGAACACCC
Downstream 100 bases:
>100_bases GCGCTCAGGCCGCCACGCGGCCGGCTTCCCCATCGACATCCGCCCCCGCACCGCACCCATTTTCGGGTGCGATGCGCCAA AATGCGTCAAGCCTGCTTTT
Product: pyrimidine 5-nucleotidase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTAQDLPLPHSSAPGARGFDQVETWVFDLDNTLYPAQHDLWGQIDARMRDYIAGLLNISREEAFARQKDYYRRYGTSLRG LMIEHGIDAHAFLDHVHEVDLSTLEPSPRLAAALEGLPGTKLVYTNGSERHALNVLGKLGLDTHFSAIHDIVAAEFHPKP TEEAYLRFLRAHGVEPTRAAMFEDLARNLEVPHRLGMTTILVVPPTEQIESRESWEFEGREAAFVDHVTEDLAGFLETLG G
Sequences:
>Translated_241_residues MTAQDLPLPHSSAPGARGFDQVETWVFDLDNTLYPAQHDLWGQIDARMRDYIAGLLNISREEAFARQKDYYRRYGTSLRG LMIEHGIDAHAFLDHVHEVDLSTLEPSPRLAAALEGLPGTKLVYTNGSERHALNVLGKLGLDTHFSAIHDIVAAEFHPKP TEEAYLRFLRAHGVEPTRAAMFEDLARNLEVPHRLGMTTILVVPPTEQIESRESWEFEGREAAFVDHVTEDLAGFLETLG G >Mature_240_residues TAQDLPLPHSSAPGARGFDQVETWVFDLDNTLYPAQHDLWGQIDARMRDYIAGLLNISREEAFARQKDYYRRYGTSLRGL MIEHGIDAHAFLDHVHEVDLSTLEPSPRLAAALEGLPGTKLVYTNGSERHALNVLGKLGLDTHFSAIHDIVAAEFHPKPT EEAYLRFLRAHGVEPTRAAMFEDLARNLEVPHRLGMTTILVVPPTEQIESRESWEFEGREAAFVDHVTEDLAGFLETLGG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27009; Mature: 26877
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQDLPLPHSSAPGARGFDQVETWVFDLDNTLYPAQHDLWGQIDARMRDYIAGLLNISR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EEAFARQKDYYRRYGTSLRGLMIEHGIDAHAFLDHVHEVDLSTLEPSPRLAAALEGLPGT HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCCC KLVYTNGSERHALNVLGKLGLDTHFSAIHDIVAAEFHPKPTEEAYLRFLRAHGVEPTRAA EEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH MFEDLARNLEVPHRLGMTTILVVPPTEQIESRESWEFEGREAAFVDHVTEDLAGFLETLG HHHHHHHCCCCCHHCCCEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure TAQDLPLPHSSAPGARGFDQVETWVFDLDNTLYPAQHDLWGQIDARMRDYIAGLLNISR CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EEAFARQKDYYRRYGTSLRGLMIEHGIDAHAFLDHVHEVDLSTLEPSPRLAAALEGLPGT HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCCC KLVYTNGSERHALNVLGKLGLDTHFSAIHDIVAAEFHPKPTEEAYLRFLRAHGVEPTRAA EEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH MFEDLARNLEVPHRLGMTTILVVPPTEQIESRESWEFEGREAAFVDHVTEDLAGFLETLG HHHHHHHCCCCCHHCCCEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA