Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158422319

Identifier: 158422319

GI number: 158422319

Start: 771040

End: 772035

Strand: Direct

Name: 158422319

Synonym: AZC_0695

Alternate gene names: NA

Gene position: 771040-772035 (Clockwise)

Preceding gene: 158422318

Following gene: 158422320

Centisome position: 14.36

GC content: 72.19

Gene sequence:

>996_bases
ATGACCGCCTCCCGCGCCCGCTTCCTCCGATTGCTCATTCTGGCATGTGTGGGGGCGGGTACGGCGCTTGCCCTTGCGGA
GCCCGCCGTGGCTCAGGCCTTCGGGCAGGCGGGAGCCAAGACGACCCCCTTCGGCCTCGGCGGGGGCGGCCCGGCGCCCA
CCGGCTTCACCGGCTATCTCATCGCCAAGCAGAGCGAGTTCTATCGCGCCCTCATCCAGGCCGTGCGTGCCGCCAAGGCG
GATGGCCATGCGCTCTATTTGCTGGCGGGCCTCTCCTTCGGTTATGGCGTCTTCCACGCCGCCGGCCCCGGCCACGGCAA
GGCGGTGATCTCCTCTTATCTGCTGGCGGACGGCGGCACGCTGCGGCGGGGCGCGCTGCTGGCGCTGGGTTCGGGCATGG
TGCAGGCCATCGCCGCCGTGCTGTTCGTGGGTGTGATGGCGCTGCTGCTCGGCTCCACCGCCGCCACCATGGCGCAGGCG
ATGAACTGGGTGGAGATCGCGGCCTATGGCGGCATCGCCCTCTTCGGCGCGCTGCTGGCGCTCACCAAGGCGCGGGCGCT
CATCGGCGTGCTGCGCGGCAGCCCCACCCATGTGCATGACGCCGAATGCGGCTGCGGTGACAGCCATGCGCCGGACCCGC
GCCTGCTGGACGGGCGCGGCGGCTGGAAGCGGGCGGCGGTGGCGGTGATCTCCGCCGGCGCGCGGCCCTGCTCGGGCGCC
ATCCTCGTGCTCACCTTCGCTTTGTCGCAGGGCGTGTTCCTGACCGGCGTTGCGTCCGCCTTCGCCATGGGGCTCGGTAC
GGCGCTCACCGTCACCGCCATCGCGGCGCTGGCGGTGTACGGCAAGCGGCTCGCGGTGCGCCTTGCGGTGCTCGCCTCCG
GACGGGGCACGGCGCTGATGCTGGTGGTGGAACTGGGCGCGGCCGTGCTCGTCTGCCTGTTCGGCCTTGCCCTCCTCACC
GGCTATGCGGTGAGCGAGCGTCTGCTGCCGGGCTGA

Upstream 100 bases:

>100_bases
CGCAGACCATGCAGGTGGACGAGAGCTTCTTCACGAACCTCACCTCGTCCAGCACCTATGGCGCCCAATATGCCGACAAG
ATCCTGGTGAAGTGTCCCTG

Downstream 100 bases:

>100_bases
CGGGCGCTTGAGTCCGGCCGATGGCTCAGGCTGAATGCCGCCGGGGAGGACGCCATGGCCGACGACATCATCCGCACGCT
GACGCCCGCCGAGGTGGACC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTASRARFLRLLILACVGAGTALALAEPAVAQAFGQAGAKTTPFGLGGGGPAPTGFTGYLIAKQSEFYRALIQAVRAAKA
DGHALYLLAGLSFGYGVFHAAGPGHGKAVISSYLLADGGTLRRGALLALGSGMVQAIAAVLFVGVMALLLGSTAATMAQA
MNWVEIAAYGGIALFGALLALTKARALIGVLRGSPTHVHDAECGCGDSHAPDPRLLDGRGGWKRAAVAVISAGARPCSGA
ILVLTFALSQGVFLTGVASAFAMGLGTALTVTAIAALAVYGKRLAVRLAVLASGRGTALMLVVELGAAVLVCLFGLALLT
GYAVSERLLPG

Sequences:

>Translated_331_residues
MTASRARFLRLLILACVGAGTALALAEPAVAQAFGQAGAKTTPFGLGGGGPAPTGFTGYLIAKQSEFYRALIQAVRAAKA
DGHALYLLAGLSFGYGVFHAAGPGHGKAVISSYLLADGGTLRRGALLALGSGMVQAIAAVLFVGVMALLLGSTAATMAQA
MNWVEIAAYGGIALFGALLALTKARALIGVLRGSPTHVHDAECGCGDSHAPDPRLLDGRGGWKRAAVAVISAGARPCSGA
ILVLTFALSQGVFLTGVASAFAMGLGTALTVTAIAALAVYGKRLAVRLAVLASGRGTALMLVVELGAAVLVCLFGLALLT
GYAVSERLLPG
>Mature_330_residues
TASRARFLRLLILACVGAGTALALAEPAVAQAFGQAGAKTTPFGLGGGGPAPTGFTGYLIAKQSEFYRALIQAVRAAKAD
GHALYLLAGLSFGYGVFHAAGPGHGKAVISSYLLADGGTLRRGALLALGSGMVQAIAAVLFVGVMALLLGSTAATMAQAM
NWVEIAAYGGIALFGALLALTKARALIGVLRGSPTHVHDAECGCGDSHAPDPRLLDGRGGWKRAAVAVISAGARPCSGAI
LVLTFALSQGVFLTGVASAFAMGLGTALTVTAIAALAVYGKRLAVRLAVLASGRGTALMLVVELGAAVLVCLFGLALLTG
YAVSERLLPG

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 33086; Mature: 32955

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASRARFLRLLILACVGAGTALALAEPAVAQAFGQAGAKTTPFGLGGGGPAPTGFTGYL
CCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
IAKQSEFYRALIQAVRAAKADGHALYLLAGLSFGYGVFHAAGPGHGKAVISSYLLADGGT
EECHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCC
LRRGALLALGSGMVQAIAAVLFVGVMALLLGSTAATMAQAMNWVEIAAYGGIALFGALLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LTKARALIGVLRGSPTHVHDAECGCGDSHAPDPRLLDGRGGWKRAAVAVISAGARPCSGA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCH
ILVLTFALSQGVFLTGVASAFAMGLGTALTVTAIAALAVYGKRLAVRLAVLASGRGTALM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH
LVVELGAAVLVCLFGLALLTGYAVSERLLPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TASRARFLRLLILACVGAGTALALAEPAVAQAFGQAGAKTTPFGLGGGGPAPTGFTGYL
CCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
IAKQSEFYRALIQAVRAAKADGHALYLLAGLSFGYGVFHAAGPGHGKAVISSYLLADGGT
EECHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCC
LRRGALLALGSGMVQAIAAVLFVGVMALLLGSTAATMAQAMNWVEIAAYGGIALFGALLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LTKARALIGVLRGSPTHVHDAECGCGDSHAPDPRLLDGRGGWKRAAVAVISAGARPCSGA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCH
ILVLTFALSQGVFLTGVASAFAMGLGTALTVTAIAALAVYGKRLAVRLAVLASGRGTALM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH
LVVELGAAVLVCLFGLALLTGYAVSERLLPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]