| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is nrtB [H]
Identifier: 158422309
GI number: 158422309
Start: 756480
End: 757388
Strand: Reverse
Name: nrtB [H]
Synonym: AZC_0685
Alternate gene names: 158422309
Gene position: 757388-756480 (Counterclockwise)
Preceding gene: 158422310
Following gene: 158422308
Centisome position: 14.1
GC content: 69.2
Gene sequence:
>909_bases ATGTCCGTCACCGCCCTCAAAGAGGCCGAGCCGCAGCGGCGTCCCGAAGCCGCCACGCCTGCGAGCGTCGCGCAGGTCGT CCGCCTGAAGCGGTCGCGCCCGCCCGTCTCCGCCCGCCTCATGGCCGCCGCACGCTGGTTCGCGGTGAGCGTGCTGCCGC CGCTCATCGTCACAGCCCTGCTGCTGCTACTGTGGGAACTGCTGTGCCGGGGCGCCGGGGCGACCCTGCCTCCGCCGAGC CGCATCTGGGCCGACAGCAAGGATCTGATCGTCGATCCCTTCTTCGTCGCCGGCCCGCAGGACATCGGCCTCGGCCTGCG CGTTCTCGTGTCGCTCCAGCGCGTGGCGGTGGGCTTCGGCCTCGCCGCTGTTGTGGGCGTGCTCACCGGCGCGCTCATCG GCCAGTCGGTCTGGGCCATGCGCGGGCTCGATCCCATCTTCCAGATGCTGCGCACGGTGCCGCCGCTCGCCTGGCTGCCG CTGGCACTCGCCGCCTTCCGCGACAGCAACCCCTCGGCCATCTTCGTGATCTTCATCACCTCCATCTGGCCGATCATCAT CAACACGGCAGTGGGCATCCGGAACATCCCGCAGGACTATCGGAACGTGGCACAGGTGCTGCGGCTGAACCCGCTGGAAT TCTTCTGGAAGATCATGCTGCCCTCGGCGGCGCCCTACATCTTCACCGGCCTGCGCATCGGCGTCGGCCTGTCCTGGCTC GCCATCGTGGCGGCGGAGATGCTCACCGGCGGCGTCGGCATCGGATTCTTCATCTGGGATGCGTGGAACTCCTCCCGCCT GCCCGACATCATCGTCGCCCTCGTCTACATCGGCGTGGTGGGCTTCGTTCTCGACCGTCTCGTGGCCGGTGTCGCCGGCA TCGTCACCCGCGGCACCGCGGCGTCCTGA
Upstream 100 bases:
>100_bases GCGCCGTCCCTCGCGATGGTCATGGCCGGGACAAGCCCGGGCATGACTCACCTTTTTGGCGGCCGTTGTGCCCCCTGTTC CGTTGTCTGAGGAGCCCGCC
Downstream 100 bases:
>100_bases AGGAGATCCCCATGCCCGCCTATCTCGAGCTCAGCCAGATCGGCAAGACCTTCACCCGCGGCGCCGCCACCACCGAGGTG CTGCGCGAGGTCTCGCTGGA
Product: nitrate transporter component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSVTALKEAEPQRRPEAATPASVAQVVRLKRSRPPVSARLMAAARWFAVSVLPPLIVTALLLLLWELLCRGAGATLPPPS RIWADSKDLIVDPFFVAGPQDIGLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLP LALAAFRDSNPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWL AIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLVAGVAGIVTRGTAAS
Sequences:
>Translated_302_residues MSVTALKEAEPQRRPEAATPASVAQVVRLKRSRPPVSARLMAAARWFAVSVLPPLIVTALLLLLWELLCRGAGATLPPPS RIWADSKDLIVDPFFVAGPQDIGLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLP LALAAFRDSNPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWL AIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLVAGVAGIVTRGTAAS >Mature_301_residues SVTALKEAEPQRRPEAATPASVAQVVRLKRSRPPVSARLMAAARWFAVSVLPPLIVTALLLLLWELLCRGAGATLPPPSR IWADSKDLIVDPFFVAGPQDIGLGLRVLVSLQRVAVGFGLAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLPL ALAAFRDSNPSAIFVIFITSIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWLA IVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLVAGVAGIVTRGTAAS
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=189, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87081802, Length=176, Percent_Identity=33.5227272727273, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32430; Mature: 32299
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTALKEAEPQRRPEAATPASVAQVVRLKRSRPPVSARLMAAARWFAVSVLPPLIVTAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLLLWELLCRGAGATLPPPSRIWADSKDLIVDPFFVAGPQDIGLGLRVLVSLQRVAVGFG HHHHHHHHHCCCCCCCCCCHHHCCCCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHH LAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLPLALAAFRDSNPSAIFVIFIT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHH SIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWL HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLVAGVAGIVTRGTA HHHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AS CC >Mature Secondary Structure SVTALKEAEPQRRPEAATPASVAQVVRLKRSRPPVSARLMAAARWFAVSVLPPLIVTAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLLLWELLCRGAGATLPPPSRIWADSKDLIVDPFFVAGPQDIGLGLRVLVSLQRVAVGFG HHHHHHHHHCCCCCCCCCCHHHCCCCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHH LAAVVGVLTGALIGQSVWAMRGLDPIFQMLRTVPPLAWLPLALAAFRDSNPSAIFVIFIT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEHHH SIWPIIINTAVGIRNIPQDYRNVAQVLRLNPLEFFWKIMLPSAAPYIFTGLRIGVGLSWL HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALVYIGVVGFVLDRLVAGVAGIVTRGTA HHHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]