| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cysJ [H]
Identifier: 158422304
GI number: 158422304
Start: 750547
End: 752160
Strand: Reverse
Name: cysJ [H]
Synonym: AZC_0680
Alternate gene names: 158422304
Gene position: 752160-750547 (Counterclockwise)
Preceding gene: 158422305
Following gene: 158422303
Centisome position: 14.01
GC content: 69.95
Gene sequence:
>1614_bases ATGACCCTCCAGACGCGAACCCCTCTGGTGCCCTTCCTGCCGGAAAGCGCCCCTTTCTCGGCCGAGCAGCGGGCCTGGCT CAACGGCTTCTTCGCCGGCATTTTCTCCGGCGAGGCGCCGGCCGGCGCCACCGTCCTGTCTCCGGCCGAGGGCGCGGCCC TCATGGCCCCGCCCGCGAGTGCTGAGGAAGACGACGGTGCGCCCTGGCATGATGCCTCGATGCCGCTCGACGAGCGCATG AAGCTCGCCGAAGGCAAGCCGCTCGCCCGGCGGATGATGGCGGCCATGGCGCAGCAGGACTGCGGCCAGTGCGGCTATAT CTGCGACAGCTATTCCAAGGCGCTCGCCTCGGGCGCCGAGACCAAGCTCAATCTCTGCGCCCCCGGCGGCAAGGAGACGC TGCGGATGCTGAAGCAGCTCGCCACCGAGCTGGATGGCGCACCCGCACCGGCGCCCACCGCGCCCGGTGCCGAGGCCGCA ACCGCCCCGGCCGCCGCTGCGCCGAGGGGCACGCGCGACAATCCCGCCGAAGTCACCTTCCTCGGCCGCTTCCGCCTCAA CAAGGACGGCTCCGAGAAGGAGACGTGGCACGTGGATTTCGACCTCGAAGGCTCGGGGCTCGACTACAAGGCGGGCGACA GCTTCGGCCTGTTCCCGGTGAATGATCCCGGCCTCGTGGCGGACGTTCTCGCCGCTTTGCATGCCCCTGCCGACTTCCCC ATCGGCGAGAAGACGCTGGAGCAGGTGCTCACCAAGGAGGTGTGCCTGAAATCGCCCCCCGACACGCTCTTCACCCTCAT CTCCTACATCACCGGCGGGGCCCGCAAGGACAACGCGAAGGCGCTGGCGGCGGGCGAGGACCCGGATGGCGATGCGGCAA CGCTCGACGTGCTGGCGGCGCTGGAGAAATTCCCCGGCATCCGGCCGGACCCGGAGGCCTTCGTGGAGTGCCTGGAGCCG CTCCAGCCGCGCCTTTATTCCATCTCTTCCAGCCCCGCCGCCACCCCCGGCCGGCTCTCGCTGACGGTGGATGCGGTGCG CTACGACCATCAGGGCCGCACGCGGCTCGGGGTGTGCTCCACCTTCCTCGGCGGGCGCGTGGCGCCAGGCACGCGGATGA AGGCCTATGTGCAGAAGGCCCACGGCTTCGGCCTGCCGACGGATGCGGCGCGGCCCGTCGTCATGGTCGGCCCCGGCACG GGCATCGCCCCCTTCCGCGCCTTCCTGCATGAGCGCATGGCGACGAAAGCGCCGGGTCGCAACTGGCTGTTCTTCGGCCA CCAGCGCTCGGCCACCGACTTCTTCTATGAAGACGAACTCGCCGGAATGCAGGCCGCGGGCGTGCTCTCGCGGCTCGACA CCGCATGGTCCCGCGAGGGCGGGGAGAAGGTCTATGTGCAGGATCGCATCCGCGCCGCAGGCCCCGAACTTTGGGCGTGG TTCGAGGAAGGCGCGCACTTCTATGTCTGCGGCGATGCCAAGCGCATGGCCAAGGATGTGGAGGCCGCCGTCGCGGATGT GGCCGCCACCCATGGCGGCCTCGGGGCCGAGGGCGGTGCCCGCTTCGTGGCGGAACTGAAGAAGGCCGGCCGCTATCAGG CGGACGTCTACTGA
Upstream 100 bases:
>100_bases CTGCGCAAAGGCTGCCGGGCGAGACCTTCGCCGCCTTCACCCGCCGCCTTGGCCCCGCCGCCCTGAAATCCCTCGTCGAG ACCGCCATGGAGCGCGCCGA
Downstream 100 bases:
>100_bases GCGCAGGAAAACCGGAGACAGCGCCTCATGAACGCCCCGCTTTCCTCGCCTCAGGCGACATCGACCACCTGTCCCTATTG CGGCGTCGGCTGCGGCGTGA
Product: sulfite reductase
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTLQTRTPLVPFLPESAPFSAEQRAWLNGFFAGIFSGEAPAGATVLSPAEGAALMAPPASAEEDDGAPWHDASMPLDERM KLAEGKPLARRMMAAMAQQDCGQCGYICDSYSKALASGAETKLNLCAPGGKETLRMLKQLATELDGAPAPAPTAPGAEAA TAPAAAAPRGTRDNPAEVTFLGRFRLNKDGSEKETWHVDFDLEGSGLDYKAGDSFGLFPVNDPGLVADVLAALHAPADFP IGEKTLEQVLTKEVCLKSPPDTLFTLISYITGGARKDNAKALAAGEDPDGDAATLDVLAALEKFPGIRPDPEAFVECLEP LQPRLYSISSSPAATPGRLSLTVDAVRYDHQGRTRLGVCSTFLGGRVAPGTRMKAYVQKAHGFGLPTDAARPVVMVGPGT GIAPFRAFLHERMATKAPGRNWLFFGHQRSATDFFYEDELAGMQAAGVLSRLDTAWSREGGEKVYVQDRIRAAGPELWAW FEEGAHFYVCGDAKRMAKDVEAAVADVAATHGGLGAEGGARFVAELKKAGRYQADVY
Sequences:
>Translated_537_residues MTLQTRTPLVPFLPESAPFSAEQRAWLNGFFAGIFSGEAPAGATVLSPAEGAALMAPPASAEEDDGAPWHDASMPLDERM KLAEGKPLARRMMAAMAQQDCGQCGYICDSYSKALASGAETKLNLCAPGGKETLRMLKQLATELDGAPAPAPTAPGAEAA TAPAAAAPRGTRDNPAEVTFLGRFRLNKDGSEKETWHVDFDLEGSGLDYKAGDSFGLFPVNDPGLVADVLAALHAPADFP IGEKTLEQVLTKEVCLKSPPDTLFTLISYITGGARKDNAKALAAGEDPDGDAATLDVLAALEKFPGIRPDPEAFVECLEP LQPRLYSISSSPAATPGRLSLTVDAVRYDHQGRTRLGVCSTFLGGRVAPGTRMKAYVQKAHGFGLPTDAARPVVMVGPGT GIAPFRAFLHERMATKAPGRNWLFFGHQRSATDFFYEDELAGMQAAGVLSRLDTAWSREGGEKVYVQDRIRAAGPELWAW FEEGAHFYVCGDAKRMAKDVEAAVADVAATHGGLGAEGGARFVAELKKAGRYQADVY >Mature_536_residues TLQTRTPLVPFLPESAPFSAEQRAWLNGFFAGIFSGEAPAGATVLSPAEGAALMAPPASAEEDDGAPWHDASMPLDERMK LAEGKPLARRMMAAMAQQDCGQCGYICDSYSKALASGAETKLNLCAPGGKETLRMLKQLATELDGAPAPAPTAPGAEAAT APAAAAPRGTRDNPAEVTFLGRFRLNKDGSEKETWHVDFDLEGSGLDYKAGDSFGLFPVNDPGLVADVLAALHAPADFPI GEKTLEQVLTKEVCLKSPPDTLFTLISYITGGARKDNAKALAAGEDPDGDAATLDVLAALEKFPGIRPDPEAFVECLEPL QPRLYSISSSPAATPGRLSLTVDAVRYDHQGRTRLGVCSTFLGGRVAPGTRMKAYVQKAHGFGLPTDAARPVVMVGPGTG IAPFRAFLHERMATKAPGRNWLFFGHQRSATDFFYEDELAGMQAAGVLSRLDTAWSREGGEKVYVQDRIRAAGPELWAWF EEGAHFYVCGDAKRMAKDVEAAVADVAATHGGLGAEGGARFVAELKKAGRYQADVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI127139033, Length=399, Percent_Identity=31.328320802005, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI24041029, Length=392, Percent_Identity=33.9285714285714, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI10835173, Length=404, Percent_Identity=32.1782178217822, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI40254422, Length=396, Percent_Identity=33.0808080808081, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI169790956, Length=418, Percent_Identity=28.7081339712919, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI169790958, Length=418, Percent_Identity=28.7081339712919, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI7657393, Length=373, Percent_Identity=30.2949061662198, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI221316705, Length=382, Percent_Identity=29.5811518324607, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI221316709, Length=375, Percent_Identity=29.3333333333333, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI221316707, Length=330, Percent_Identity=29.3939393939394, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1789123, Length=400, Percent_Identity=40, Blast_Score=286, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17554134, Length=393, Percent_Identity=30.2798982188295, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17566446, Length=470, Percent_Identity=25.1063829787234, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17531441, Length=250, Percent_Identity=28, Blast_Score=100, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321143, Length=376, Percent_Identity=27.9255319148936, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6321832, Length=414, Percent_Identity=25.8454106280193, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6325305, Length=247, Percent_Identity=26.3157894736842, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI24582192, Length=448, Percent_Identity=31.0267857142857, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI17137192, Length=448, Percent_Identity=31.4732142857143, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI78706872, Length=377, Percent_Identity=34.2175066312997, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24583543, Length=377, Percent_Identity=34.2175066312997, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI78706876, Length=377, Percent_Identity=34.2175066312997, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24660907, Length=232, Percent_Identity=31.8965517241379, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24660903, Length=232, Percent_Identity=31.8965517241379, Blast_Score=105, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 56962; Mature: 56831
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQTRTPLVPFLPESAPFSAEQRAWLNGFFAGIFSGEAPAGATVLSPAEGAALMAPPAS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCC AEEDDGAPWHDASMPLDERMKLAEGKPLARRMMAAMAQQDCGQCGYICDSYSKALASGAE CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC TKLNLCAPGGKETLRMLKQLATELDGAPAPAPTAPGAEAATAPAAAAPRGTRDNPAEVTF CEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE LGRFRLNKDGSEKETWHVDFDLEGSGLDYKAGDSFGLFPVNDPGLVADVLAALHAPADFP EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC IGEKTLEQVLTKEVCLKSPPDTLFTLISYITGGARKDNAKALAAGEDPDGDAATLDVLAA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHH LEKFPGIRPDPEAFVECLEPLQPRLYSISSSPAATPGRLSLTVDAVRYDHQGRTRLGVCS HHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHH TFLGGRVAPGTRMKAYVQKAHGFGLPTDAARPVVMVGPGTGIAPFRAFLHERMATKAPGR HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC NWLFFGHQRSATDFFYEDELAGMQAAGVLSRLDTAWSREGGEKVYVQDRIRAAGPELWAW CEEEECCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHH FEEGAHFYVCGDAKRMAKDVEAAVADVAATHGGLGAEGGARFVAELKKAGRYQADVY HHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLQTRTPLVPFLPESAPFSAEQRAWLNGFFAGIFSGEAPAGATVLSPAEGAALMAPPAS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCC AEEDDGAPWHDASMPLDERMKLAEGKPLARRMMAAMAQQDCGQCGYICDSYSKALASGAE CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC TKLNLCAPGGKETLRMLKQLATELDGAPAPAPTAPGAEAATAPAAAAPRGTRDNPAEVTF CEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE LGRFRLNKDGSEKETWHVDFDLEGSGLDYKAGDSFGLFPVNDPGLVADVLAALHAPADFP EEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC IGEKTLEQVLTKEVCLKSPPDTLFTLISYITGGARKDNAKALAAGEDPDGDAATLDVLAA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHH LEKFPGIRPDPEAFVECLEPLQPRLYSISSSPAATPGRLSLTVDAVRYDHQGRTRLGVCS HHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHH TFLGGRVAPGTRMKAYVQKAHGFGLPTDAARPVVMVGPGTGIAPFRAFLHERMATKAPGR HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCC NWLFFGHQRSATDFFYEDELAGMQAAGVLSRLDTAWSREGGEKVYVQDRIRAAGPELWAW CEEEECCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHH FEEGAHFYVCGDAKRMAKDVEAAVADVAATHGGLGAEGGARFVAELKKAGRYQADVY HHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA