Click here to switch to the map view.

The map label for this gene is flgD [C]

Identifier: 158422276

GI number: 158422276

Start: 722895

End: 723311

Strand: Direct

Name: flgD [C]

Synonym: AZC_0652

Alternate gene names: 158422276

Gene position: 722895-723311 (Clockwise)

Preceding gene: 158422275

Following gene: 158422277

Centisome position: 13.46

GC content: 65.47

Gene sequence:

>417_bases
ATGACCACCGTTGCGAGCACCACCAGCTCTACGTCCACGAACACGGCGGCCGCCGCGTCGACCGCGGCCAGCAATGCGAG
CACGGTTGATTACAACCAGTTCCTGCAACTGCTCGTGGCGCAGCTGAAGAACCAGGATCCGACGCAGCCGATGGACTCCA
CGGCCTATCTGTCGCAGCTCGCCTCCTTCTCGCAGGTCGAACAGCAGACCAACACCAACAAGAAGCTGGACACGCTGCTC
TCGGCGAGCGCGCTCCAGTCCGCGGATGCCGCCATCGGCAAGACCGTGACCAGCGCCGACGGGACCGTCAGCGGCACCGT
CGCCTCTGTGAGCCTCGTCAGCGGCGGCGCGCCCATCGCGACGCTGAAGGACGGCTCCAAGGTTACGCTCGACTCCTCGG
TGAGCATCAGCGGATGA

Upstream 100 bases:

>100_bases
TCCTCGCCCATGGTGGGAGCAAGGCTGCCTGAGCGGGCCGGGCCGCTGGTCGGCTTCGCGCAACCTTCGCCAGGCATTGT
GTGCGTGAAGGAGAACCAAC

Downstream 100 bases:

>100_bases
ACGAGGCCGACGCCCTCGACGTCGTCCGAAACGCCATCTGGACCATCCTGTTGGCGGCGGGGCCTGCGGTGGCGGCGGCG
ATGCTGGTGGGCATCTTCAT

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; Flagellar Basal-Body Rod Protein

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTTVASTTSSTSTNTAAAASTAASNASTVDYNQFLQLLVAQLKNQDPTQPMDSTAYLSQLASFSQVEQQTNTNKKLDTLL
SASALQSADAAIGKTVTSADGTVSGTVASVSLVSGGAPIATLKDGSKVTLDSSVSISG

Sequences:

>Translated_138_residues
MTTVASTTSSTSTNTAAAASTAASNASTVDYNQFLQLLVAQLKNQDPTQPMDSTAYLSQLASFSQVEQQTNTNKKLDTLL
SASALQSADAAIGKTVTSADGTVSGTVASVSLVSGGAPIATLKDGSKVTLDSSVSISG
>Mature_137_residues
TTVASTTSSTSTNTAAAASTAASNASTVDYNQFLQLLVAQLKNQDPTQPMDSTAYLSQLASFSQVEQQTNTNKKLDTLLS
ASALQSADAAIGKTVTSADGTVSGTVASVSLVSGGAPIATLKDGSKVTLDSSVSISG

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13811; Mature: 13680

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVASTTSSTSTNTAAAASTAASNASTVDYNQFLQLLVAQLKNQDPTQPMDSTAYLSQL
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ASFSQVEQQTNTNKKLDTLLSASALQSADAAIGKTVTSADGTVSGTVASVSLVSGGAPIA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHEEEEEECCCCCEE
TLKDGSKVTLDSSVSISG
EECCCCEEEECCCEECCC
>Mature Secondary Structure 
TTVASTTSSTSTNTAAAASTAASNASTVDYNQFLQLLVAQLKNQDPTQPMDSTAYLSQL
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ASFSQVEQQTNTNKKLDTLLSASALQSADAAIGKTVTSADGTVSGTVASVSLVSGGAPIA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHEEEEEECCCCCEE
TLKDGSKVTLDSSVSISG
EECCCCEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA